Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68162 | Canola | extracellular, plasma membrane, vacuole | 92.49 | 92.49 |
| AT1G74830.1 | Thale cress | extracellular, golgi, vacuole | 80.93 | 73.62 |
| CDY45396 | Canola | extracellular, golgi, vacuole | 78.7 | 71.59 |
| CDX73116 | Canola | extracellular, golgi, vacuole | 78.9 | 70.6 |
| CDY26705 | Canola | endoplasmic reticulum, plasma membrane, plastid | 62.07 | 59.07 |
| CDY19266 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 61.46 | 58.16 |
| CDX81908 | Canola | endoplasmic reticulum, vacuole | 58.82 | 58.12 |
| CDY21687 | Canola | endoplasmic reticulum, vacuole | 60.04 | 57.93 |
| PGSC0003DMT400030876 | Potato | endoplasmic reticulum, extracellular | 44.62 | 42.47 |
| Solyc12g027730.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 44.22 | 42.0 |
| KRH54475 | Soybean | endoplasmic reticulum | 50.1 | 41.03 |
| KRH63445 | Soybean | endoplasmic reticulum | 50.71 | 40.65 |
| PGSC0003DMT400062848 | Potato | golgi | 45.44 | 37.4 |
| Solyc03g113600.2.1 | Tomato | golgi | 44.83 | 36.96 |
| PGSC0003DMT400083120 | Potato | endoplasmic reticulum | 44.83 | 36.96 |
| VIT_17s0000g05320.t01 | Wine grape | endoplasmic reticulum, golgi | 45.64 | 36.23 |
| Solyc06g071190.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 46.45 | 35.84 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 10.14 | 25.25 |
| CDY09477 | Canola | nucleus | 9.13 | 24.19 |
| CDY01114 | Canola | extracellular, plasma membrane | 12.58 | 23.75 |
| CDY47332 | Canola | extracellular, plasma membrane | 12.58 | 23.75 |
| CDX69426 | Canola | endoplasmic reticulum, golgi, plastid | 25.96 | 18.71 |
| CDY16985 | Canola | endoplasmic reticulum, golgi | 25.56 | 18.56 |
| CDY14078 | Canola | nucleus | 13.18 | 16.84 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 23.12 | 16.03 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 23.33 | 15.95 |
| CDX96274 | Canola | mitochondrion | 23.73 | 15.9 |
| CDX88641 | Canola | nucleus | 3.85 | 15.57 |
| CDX98935 | Canola | nucleus | 12.78 | 15.44 |
| CDY04993 | Canola | nucleus | 12.78 | 15.37 |
| CDY29652 | Canola | endoplasmic reticulum | 22.72 | 15.36 |
| CDY70407 | Canola | peroxisome | 11.36 | 15.18 |
| CDY11550 | Canola | mitochondrion | 23.94 | 14.79 |
| CDX78259 | Canola | nucleus | 12.17 | 14.78 |
| CDY02887 | Canola | cytosol, nucleus, peroxisome | 11.36 | 14.78 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.17 | 14.76 |
| CDX70091 | Canola | nucleus | 12.78 | 14.75 |
| CDY34794 | Canola | nucleus | 9.74 | 14.72 |
| CDX68698 | Canola | cytosol | 8.72 | 14.63 |
| CDX76832 | Canola | nucleus | 9.53 | 14.6 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 22.52 | 14.55 |
| CDX67607 | Canola | peroxisome | 12.17 | 14.29 |
| CDY28219 | Canola | cytosol | 8.52 | 14.29 |
| CDX73453 | Canola | nucleus | 11.97 | 14.25 |
| CDY08489 | Canola | nucleus | 11.16 | 14.21 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 27.59 | 14.21 |
| CDY13389 | Canola | nucleus | 11.56 | 14.18 |
| CDX93536 | Canola | extracellular, vacuole | 27.59 | 14.11 |
| CDY18267 | Canola | endoplasmic reticulum, plasma membrane | 14.2 | 13.44 |
| CDX89779 | Canola | endoplasmic reticulum, extracellular | 14.0 | 13.24 |
| CDX76130 | Canola | cytosol | 10.55 | 13.07 |
| CDY67532 | Canola | nucleus | 10.95 | 12.95 |
| CDY07526 | Canola | nucleus | 7.51 | 12.85 |
| CDY01147 | Canola | extracellular, golgi, vacuole | 14.4 | 12.84 |
| CDY01064 | Canola | nucleus | 11.36 | 12.56 |
| CDY31127 | Canola | cytosol | 16.43 | 12.46 |
| CDX72271 | Canola | nucleus | 9.74 | 12.44 |
| CDY68842 | Canola | vacuole | 14.2 | 12.43 |
| CDY02772 | Canola | nucleus | 8.72 | 11.75 |
| CDY32744 | Canola | nucleus | 8.52 | 11.48 |
| CDY51277 | Canola | nucleus | 8.52 | 11.41 |
| CDY50792 | Canola | nucleus | 8.52 | 11.41 |
| CDX88643 | Canola | nucleus | 5.27 | 10.92 |
| CDY11846 | Canola | nucleus | 5.07 | 10.5 |
| CDY07525 | Canola | peroxisome | 1.62 | 8.33 |
Protein Annotations
| EnsemblPlants:CDX85859 | EnsemblPlantsGene:GSBRNA2T00143651001 | GO:A0A078DBX2 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil |
| PANTHER:PTHR31448 | PANTHER:PTHR31448:SF9 | PFAM:PF04576 | PFscan:PS51775 | ProteinID:CDX85859 | ProteinID:CDX85859.1 |
| SEG:seg | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0004EF1E2C | MapMan:20.2.4.3 | : |
Description
BnaC06g22750D
Coordinates
chrLK031843:-:353478..354959
Molecular Weight (calculated)
55701.7 Da
IEP (calculated)
4.726
GRAVY (calculated)
-0.270
Length
493 amino acids
Sequence
(BLAST)
(BLAST)
001: MIIQLLCFFL FLFLLLQVTM LKRSFKNFVE QELGSFPQLL IYTLLELTLI TILFIDGALA FLSNQYARFF ELNTPCLLCT RIDHVLVPRN PHFYYNDSIC
101: DSHKKKVSSL AYCHVHKKLS EIKHMCEGCL LSFATQKESD CDTFKSLIGI LHKDLELLIN DQRELALALK KDDNLVQTST NLVDYKTNNI SLKQHCSCCG
201: DLLKNNSSFL APAPSPRVPY NKLSENESEF RVLDVDITPS VVRGGSKFFG TPLRKLPLDK TENTSDLADS DGESILNQLK KEARLDKKSL MDLYMELDEE
301: RSASAVAANN AMAMITKLQA EKAAVQMEAL QCQRMMDEQA EYDQEALQSL SSELAKREED MKELEDELEA YRERYGCLTD KDDVREELLE EHGSASVVCY
401: SNHEDNGANI DPTGSCKSEE SRFLGQMKGA ESKEGIVKEL SEITERLSAL QSNGELLKHI ADVLDVSEGE AILLHITQNL HMLRSFVAMP SES
101: DSHKKKVSSL AYCHVHKKLS EIKHMCEGCL LSFATQKESD CDTFKSLIGI LHKDLELLIN DQRELALALK KDDNLVQTST NLVDYKTNNI SLKQHCSCCG
201: DLLKNNSSFL APAPSPRVPY NKLSENESEF RVLDVDITPS VVRGGSKFFG TPLRKLPLDK TENTSDLADS DGESILNQLK KEARLDKKSL MDLYMELDEE
301: RSASAVAANN AMAMITKLQA EKAAVQMEAL QCQRMMDEQA EYDQEALQSL SSELAKREED MKELEDELEA YRERYGCLTD KDDVREELLE EHGSASVVCY
401: SNHEDNGANI DPTGSCKSEE SRFLGQMKGA ESKEGIVKEL SEITERLSAL QSNGELLKHI ADVLDVSEGE AILLHITQNL HMLRSFVAMP SES
001: MYIQLLCFFL FLFLLLQATM SKRSFKKFVE QELGSLPHFL IYTVLEWSLI VFLFIDGVIA FLSNQFAKFF DLNIPCLLCT RIDHILVPRD PQFYYNESIC
101: DSHKKKVSSL AYCHVHKKLS EIKHMCEGCL LSFATEKDSD CDTYKSLIGI LHKDLELLID DERDLPLAFK KDDNLVQTTK NLVDYKTNNI KNDSLKQHCS
201: CCGELLKIKS EKLPKNNNSF LAPAPSPRVS HNKLSENESE FKDMDVDRTP SFVRGGNKFF GIPLSDSAQN SPRWSVRSLK KSVLNKTENA SDTTDPTGES
301: ILNQLKKEVR LDKKSLIDLY MELDEERSAS AVAANEAMAM ITRLQAEKAA VQMEALQYQR MMDEQAEYDQ EALQSMSSEL AKREEEMKEL EAEFEVYREK
401: YGCLTDQEDA REEFHKQNGN ASAYDDCQET KPVSDLAVSS SNQQENGENI DQNGQSKRSE ESTAENVVSA DEEKGSESKE GIVKELSEIT ERLSTLQSNG
501: DLLKHIADVL DVSEGEAILL QISQNLHMLR SFVAMPSESM NL
101: DSHKKKVSSL AYCHVHKKLS EIKHMCEGCL LSFATEKDSD CDTYKSLIGI LHKDLELLID DERDLPLAFK KDDNLVQTTK NLVDYKTNNI KNDSLKQHCS
201: CCGELLKIKS EKLPKNNNSF LAPAPSPRVS HNKLSENESE FKDMDVDRTP SFVRGGNKFF GIPLSDSAQN SPRWSVRSLK KSVLNKTENA SDTTDPTGES
301: ILNQLKKEVR LDKKSLIDLY MELDEERSAS AVAANEAMAM ITRLQAEKAA VQMEALQYQR MMDEQAEYDQ EALQSMSSEL AKREEEMKEL EAEFEVYREK
401: YGCLTDQEDA REEFHKQNGN ASAYDDCQET KPVSDLAVSS SNQQENGENI DQNGQSKRSE ESTAENVVSA DEEKGSESKE GIVKELSEIT ERLSTLQSNG
501: DLLKHIADVL DVSEGEAILL QISQNLHMLR SFVAMPSESM NL
Arabidopsis Description
MYOB6Probable myosin-binding protein 6 [Source:UniProtKB/Swiss-Prot;Acc:F4HVS6]
SUBAcon: [golgi,extracellular,vacuole]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.