Factsheet for Solyc06g071190.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

nucleus 2
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400083120	Potato	endoplasmic reticulum	90.92	97.16
Solyc12g027730.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	54.46	67.05
Solyc03g113600.2.1	Tomato	golgi	60.88	65.05
VIT_17s0000g05320.t01	Wine grape	endoplasmic reticulum, golgi	46.79	48.15
Bra003783.1-P	Field mustard	extracellular, plasma membrane	35.68	48.1
AT1G18990.1	Thale cress	endoplasmic reticulum, plasma membrane	39.12	47.71
CDY26705	Canola	endoplasmic reticulum, plasma membrane, plastid	38.5	47.49
KRH63445	Soybean	endoplasmic reticulum	45.7	47.48
Bra025705.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	38.18	47.1
CDY19266	Canola	endoplasmic reticulum, nucleus, plasma membrane	38.34	47.02
KRH54475	Soybean	endoplasmic reticulum	43.98	46.68
CDX85859	Canola	extracellular, plasma membrane, vacuole	35.84	46.45
CDY21687	Canola	endoplasmic reticulum, vacuole	36.93	46.18
Bra031059.1-P	Field mustard	endoplasmic reticulum, vacuole	36.93	46.18
Bra015891.1-P	Field mustard	endoplasmic reticulum, golgi	39.12	46.04
AT1G74830.1	Thale cress	extracellular, golgi, vacuole	38.81	45.76
CDX68162	Canola	extracellular, plasma membrane, vacuole	35.05	45.44
CDY45396	Canola	extracellular, golgi, vacuole	38.5	45.39
CDX81908	Canola	endoplasmic reticulum, vacuole	35.37	45.29
CDX73116	Canola	extracellular, golgi, vacuole	38.97	45.19
Solyc11g045470.1.1	Tomato	cytosol	5.01	38.1
Solyc04g007870.2.1	Tomato	endoplasmic reticulum, golgi	27.54	21.15
Solyc01g097040.2.1	Tomato	golgi, plasma membrane, plastid	26.6	18.66
Solyc10g081620.1.1	Tomato	cytosol, plastid	11.89	14.73
Solyc07g005910.2.1	Tomato	nucleus	10.17	14.35
Solyc09g066140.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	24.41	13.05
Solyc11g020850.1.1	Tomato	nucleus	10.33	12.57
Solyc12g098380.1.1	Tomato	extracellular, plasma membrane, vacuole	13.93	11.95
Solyc12g009900.1.1	Tomato	cytosol	9.08	9.11
Solyc11g045480.1.1	Tomato	mitochondrion	2.35	7.39

Protein Annotations

EnsemblPlants:Solyc06g071190.2.1	EnsemblPlantsGene:Solyc06g071190.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0017022	InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil
PANTHER:PTHR31448	PANTHER:PTHR31448:SF9	PFAM:PF04576	PFscan:PS51775	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002766F18	UniProt:K4C8J2	MapMan:20.2.4.3	:	:	:

Description

No Description!

Coordinates

chr6:+:43772863..43776209

Molecular Weight (calculated)

72430.4 Da

IEP (calculated)

4.819

GRAVY (calculated)

-0.537

Length

639 amino acids

Sequence
(BLAST)

001: MASGSFKCFV DQKLGKFAFF FLYAILEWVL IIVLFVDGFL AFFCNEYAKF FELNIPCLLC TRIDHVLVNR NSSFYYNESI CEVHKKDLSA LAYCHVHKKL
101: SEIKNMCEGC LLSFATERDA DCERYKSLAG VLKKDIDCFA GDDARLTVRT GKKELDEAIQ IERGVVARCS CCGEPLKMRS KFARNASING RSYSQAPAPS
201: PRASPRAPLL GAWRNIEEVR HLESPRSVRY TELKFTQDDE GPSHGGKEDM KAATMPLLPD SEDTNIDSSC KTPNNTRNRF FGIPLSDSAQ ASPRFSHHRP
301: RKSWISDKLD FTSEANDLNS VPSDLEEDVL NRLKKQVRLD RKSLVELYME LDEERSASAI AANNAMAMIT RLQAEKAAVE MEAFQYQRMM EEQAEYDQEA
401: LQFMNDDLLK KEDEMKLLQV ELETYREKYG LIKTIGSEVC EVDDDEDYQE LKSQCLSSIS ERSDCASPFE ADHHRVNERL FECPAENGGV NVEESQLDFE
501: KQRSYLMGLL TDVVEKIQIS PEEGPHTLGP KTIEQKGNEN KAALTREVSL IRERLRAIEA ESGFLKHAAM TLQSGDEGSK LLTEIAQHLQ NLRHTSNTSS
601: ENADAGHQSS EIDMEPDNSD TIQQAFHLSL VQMEQIEKP

Best Arabidopsis Sequence Match ( AT1G74830.1 )
(BLAST)

001: MYIQLLCFFL FLFLLLQATM SKRSFKKFVE QELGSLPHFL IYTVLEWSLI VFLFIDGVIA FLSNQFAKFF DLNIPCLLCT RIDHILVPRD PQFYYNESIC
101: DSHKKKVSSL AYCHVHKKLS EIKHMCEGCL LSFATEKDSD CDTYKSLIGI LHKDLELLID DERDLPLAFK KDDNLVQTTK NLVDYKTNNI KNDSLKQHCS
201: CCGELLKIKS EKLPKNNNSF LAPAPSPRVS HNKLSENESE FKDMDVDRTP SFVRGGNKFF GIPLSDSAQN SPRWSVRSLK KSVLNKTENA SDTTDPTGES
301: ILNQLKKEVR LDKKSLIDLY MELDEERSAS AVAANEAMAM ITRLQAEKAA VQMEALQYQR MMDEQAEYDQ EALQSMSSEL AKREEEMKEL EAEFEVYREK
401: YGCLTDQEDA REEFHKQNGN ASAYDDCQET KPVSDLAVSS SNQQENGENI DQNGQSKRSE ESTAENVVSA DEEKGSESKE GIVKELSEIT ERLSTLQSNG
501: DLLKHIADVL DVSEGEAILL QISQNLHMLR SFVAMPSESM NL

Arabidopsis Description

MYOB6Probable myosin-binding protein 6 [Source:UniProtKB/Swiss-Prot;Acc:F4HVS6]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.