Factsheet for Bra025705.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26705	Canola	endoplasmic reticulum, plasma membrane, plastid	99.61	99.61
CDY19266	Canola	endoplasmic reticulum, nucleus, plasma membrane	97.3	96.74
AT1G18990.1	Thale cress	endoplasmic reticulum, plasma membrane	84.36	83.4
Bra031059.1-P	Field mustard	endoplasmic reticulum, vacuole	80.89	82.0
Bra003783.1-P	Field mustard	extracellular, plasma membrane	58.49	63.92
Bra015891.1-P	Field mustard	endoplasmic reticulum, golgi	63.32	60.41
PGSC0003DMT400030876	Potato	endoplasmic reticulum, extracellular	45.37	45.37
Solyc12g027730.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	44.79	44.7
KRH54475	Soybean	endoplasmic reticulum	51.16	44.02
KRH63445	Soybean	endoplasmic reticulum	51.35	43.25
PGSC0003DMT400062848	Potato	golgi	46.72	40.4
Solyc03g113600.2.1	Tomato	golgi	46.14	39.97
PGSC0003DMT400083120	Potato	endoplasmic reticulum	46.14	39.97
VIT_17s0000g05320.t01	Wine grape	endoplasmic reticulum, golgi	46.53	38.81
Solyc06g071190.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	47.1	38.18
Bra034886.1-P	Field mustard	cytosol	8.3	33.59
Bra032692.1-P	Field mustard	extracellular, plasma membrane	11.58	22.99
Bra008601.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	25.87	19.42
Bra018297.1-P	Field mustard	endoplasmic reticulum, extracellular	22.59	17.08
Bra028728.1-P	Field mustard	nucleus	12.93	16.46
Bra021657.1-P	Field mustard	endoplasmic reticulum	23.55	16.44
Bra009206.1-P	Field mustard	nucleus	12.93	15.69
Bra018599.1-P	Field mustard	extracellular, vacuole	28.76	15.55
Bra007093.1-P	Field mustard	nucleus	12.16	15.52
Bra006798.1-P	Field mustard	nucleus	9.07	15.36
Bra016190.1-P	Field mustard	mitochondrion	24.71	14.7
Bra006800.1-P	Field mustard	cytosol	4.44	14.2
Bra014792.1-P	Field mustard	cytosol	10.62	13.82
Bra034805.1-P	Field mustard	nucleus	11.78	13.65
Bra020409.1-P	Field mustard	nucleus	8.3	13.52
Bra039233.1-P	Field mustard	nucleus	8.49	13.5
Bra002693.1-P	Field mustard	nucleus	9.46	13.32
Bra002694.1-P	Field mustard	nucleus	9.46	13.32
Bra015360.1-P	Field mustard	endoplasmic reticulum, extracellular	13.32	13.22
Bra038684.1-P	Field mustard	nucleus	10.23	13.15
Bra030742.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid, vacuole	27.99	12.59
Bra032725.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	12.55	11.78
Bra011226.1-P	Field mustard	cytosol	7.34	11.55

Protein Annotations

EnsemblPlants:Bra025705.1	EnsemblPlants:Bra025705.1-P	EnsemblPlantsGene:Bra025705	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0017022	InterPro:GTD-bd	InterPro:IPR007656
ncoils:Coil	PANTHER:PTHR31448	PANTHER:PTHR31448:SF9	PFAM:PF04576	PFscan:PS51775	SEG:seg
TMHMM:TMhelix	UniParc:UPI000253F526	UniProt:M4EA97	MapMan:20.2.4.3	:	:

Description

AT1G18990 (E=6e-216) | unknown protein

Coordinates

chrA06:-:7395589..7397218

Molecular Weight (calculated)

59325.1 Da

IEP (calculated)

4.591

GRAVY (calculated)

-0.534

Length

518 amino acids

Sequence
(BLAST)

001: MSNRSFKNFI EEELGTFPHF FIYAILEWII IILLFIDGLL AFFSNQFARF FNLRTPCLLC TRLDHVLVKT NPDFYYNDSI CDSHKRNISS LAYCHVHKKL
101: SEIKHMCEGC LLSFATEKES DVDTYKSLIG ILHKDLELLI DERELQLAFP VAGSKKDENF HRTNNRFQQQ QHCSCCGELL KIKTEKPKNN NNQSFFAGPS
201: PSPRVSFNQR TLDLSQIKYS ELPEEEDTKG ALGDTVDDRT PSFVKGGNNN RFFGLPLSDS ALNSPRWSVR SMKKSLIDQN GAESEVLDGD SILHHLKRQV
301: RLDRKSLMDL YMDLDEERSA SAVAANNAMA MITRLQAEKA AVQMEALQYQ RMMDEQAEYD QEALQSMNGL LVKREEDMKE LEAEIEAYRL RYGLLREEED
401: GQGREPEEFL DETKLVLDLP VCSSNGEEDL EHKQDSAEEP KANNDGIIEE EREDGSRKAV LVKEITEITE RLSAIESKGE LLQQISDVLD VSEGEAILYQ
501: ISQNLHMLRS FIEMPSES

Best Arabidopsis Sequence Match ( AT1G18990.1 )
(BLAST)

001: MSNRSFKNFI EEELGTFPQF LIYALLEWIL IIILFIDGFL AFFSNQIAKF FDLKIPCLLC TRLDHVLVSR NPDFYYNDSI CDAHKKNVSS LAYCHVHKKL
101: SEIKRMCEGC LLSFATEKET DVDTYKSLIG ILHKDLELLI DDERELQLAF PVAGSKKDEN FYQVENRTNN SNDRFQRQQR CSCCGQIMKL KSDKPKSNNQ
201: SFFGAPSPSP RVSFNQRTLD LSNIKYTDLP EDDDALNTKG ASLDAVDDRT PSFVKGGNKF FGIPLSDSAQ NSPRWSVRSM KKSFVDQNGL ESEVLDGDSI
301: LQHLNRQVRL DRKSLMDLYM ELDEERSASA VAANNAMAMI TRLQAEKAAV QMEALQYQRM MDEQAEYDQE ALQSMNGLLV KREEEMKELE AGIEVYRLRY
401: GLLREERGEA EEFLDEETKP VSDLPVCSSN HEEDLEQMKD SAEDSIGNNG VMIIEEEKEN GSRKDMLVKE ISEITERLNA IESKGELLQQ ISDVLDVSEG
501: EAILLQISQN LHMLRSFIEM PTES

Arabidopsis Description

MYOB5Probable myosin-binding protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMC8]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.