Factsheet for Bra031059.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

nucleus 2
endoplasmic reticulum 3
extracellular 2
vacuole 3
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21687	Canola	endoplasmic reticulum, vacuole	100.0	100.0
CDX81908	Canola	endoplasmic reticulum, vacuole	93.15	95.39
Bra025705.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	82.0	80.89
AT1G18990.1	Thale cress	endoplasmic reticulum, plasma membrane	81.41	79.39
Bra003783.1-P	Field mustard	extracellular, plasma membrane	58.32	62.87
Bra015891.1-P	Field mustard	endoplasmic reticulum, golgi	63.01	59.3
PGSC0003DMT400030876	Potato	endoplasmic reticulum, extracellular	45.21	44.59
Solyc12g027730.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	45.01	44.32
KRH54475	Soybean	endoplasmic reticulum	48.92	41.53
KRH63445	Soybean	endoplasmic reticulum	49.12	40.81
PGSC0003DMT400062848	Potato	golgi	45.79	39.07
PGSC0003DMT400083120	Potato	endoplasmic reticulum	45.21	38.63
Solyc03g113600.2.1	Tomato	golgi	45.21	38.63
VIT_17s0000g05320.t01	Wine grape	endoplasmic reticulum, golgi	45.79	37.68
Solyc06g071190.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	46.18	36.93
Bra034886.1-P	Field mustard	cytosol	8.81	35.16
Bra032692.1-P	Field mustard	extracellular, plasma membrane	11.94	23.37
Bra008601.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	24.85	18.41
Bra028728.1-P	Field mustard	nucleus	12.72	15.97
Bra018297.1-P	Field mustard	endoplasmic reticulum, extracellular	21.33	15.91
Bra021657.1-P	Field mustard	endoplasmic reticulum	22.9	15.77
Bra007093.1-P	Field mustard	nucleus	12.33	15.52
Bra006798.1-P	Field mustard	nucleus	9.2	15.36
Bra009206.1-P	Field mustard	nucleus	12.52	14.99
Bra018599.1-P	Field mustard	extracellular, vacuole	27.98	14.93
Bra016190.1-P	Field mustard	mitochondrion	24.85	14.58
Bra002693.1-P	Field mustard	nucleus	9.98	13.86
Bra002694.1-P	Field mustard	nucleus	9.98	13.86
Bra020409.1-P	Field mustard	nucleus	8.61	13.84
Bra014792.1-P	Field mustard	cytosol	10.76	13.82
Bra015360.1-P	Field mustard	endoplasmic reticulum, extracellular	13.89	13.6
Bra006800.1-P	Field mustard	cytosol	4.31	13.58
Bra034805.1-P	Field mustard	nucleus	11.55	13.2
Bra039233.1-P	Field mustard	nucleus	8.41	13.19
Bra038684.1-P	Field mustard	nucleus	10.18	12.9
Bra032725.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	13.31	12.32
Bra030742.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid, vacuole	27.59	12.24
Bra011226.1-P	Field mustard	cytosol	7.83	12.16

Protein Annotations

EnsemblPlants:Bra031059.1	EnsemblPlants:Bra031059.1-P	EnsemblPlantsGene:Bra031059	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0017022	InterPro:GTD-bd	InterPro:IPR007656
ncoils:Coil	PANTHER:PTHR31448	PANTHER:PTHR31448:SF9	PFAM:PF04576	PFscan:PS51775	SEG:seg
TMHMM:TMhelix	UniParc:UPI0002542A58	UniProt:M4EQI8	MapMan:20.2.4.3	:	:

Description

AT1G18990 (E=1e-192) | unknown protein

Coordinates

chrA09:+:32699474..32701078

Molecular Weight (calculated)

58335.8 Da

IEP (calculated)

4.405

GRAVY (calculated)

-0.598

Length

511 amino acids

Sequence
(BLAST)

001: MSNRSFKNFI EDELGTFPHF LIYAILEWII IILLFLDGLL AFSSNQLSKL FDLKTPCLLC TRLDHVLVPT NPDFYYNDSI CDSHKKNVSS LAYCHVHKKL
101: SEIKRMCEGC LLSFATEKET DVDTYKSLIG ILHKDLELLI DDEHQKAFPV TGSKLDLRAN NRFQEQQCCS CCGELLKIKT EKQPNSNGNR SFFAAPSPSP
201: RVSFNQRTMD FSNLPEEEEA ANNKDTLDRT PSFVRGGNNR FFSDSAQNSP RWSVRSMKKS LIDQTGPEAE VLDGDSILHH LNRQVRLDRK SLMDLYMELD
301: EERSASAVAA NNAMAMITRL QAEKAAVQME ALQYQRMMDE QAEYDQEAVQ SLSGLLVKRE EDMKELEAEV EAYRLRYGLL MGEEEEQPQQ EDSKGGEAEE
401: FLDEENNETK PDCSLNNEED LVQMKDSGEE ETKDNNGGMI IEEEKEKGSR KDMLVKEISE ITERLHEIES KGELLQHISE VLDVSEGEAI LLQISQNLNM
501: LRSFIEMPSE S

Best Arabidopsis Sequence Match ( AT1G18990.1 )
(BLAST)

001: MSNRSFKNFI EEELGTFPQF LIYALLEWIL IIILFIDGFL AFFSNQIAKF FDLKIPCLLC TRLDHVLVSR NPDFYYNDSI CDAHKKNVSS LAYCHVHKKL
101: SEIKRMCEGC LLSFATEKET DVDTYKSLIG ILHKDLELLI DDERELQLAF PVAGSKKDEN FYQVENRTNN SNDRFQRQQR CSCCGQIMKL KSDKPKSNNQ
201: SFFGAPSPSP RVSFNQRTLD LSNIKYTDLP EDDDALNTKG ASLDAVDDRT PSFVKGGNKF FGIPLSDSAQ NSPRWSVRSM KKSFVDQNGL ESEVLDGDSI
301: LQHLNRQVRL DRKSLMDLYM ELDEERSASA VAANNAMAMI TRLQAEKAAV QMEALQYQRM MDEQAEYDQE ALQSMNGLLV KREEEMKELE AGIEVYRLRY
401: GLLREERGEA EEFLDEETKP VSDLPVCSSN HEEDLEQMKD SAEDSIGNNG VMIIEEEKEN GSRKDMLVKE ISEITERLNA IESKGELLQQ ISDVLDVSEG
501: EAILLQISQN LHMLRSFIEM PTES

Arabidopsis Description

MYOB5Probable myosin-binding protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMC8]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.