Factsheet for Bra006800.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88641	Canola	nucleus	74.69	99.18
Bra006798.1-P	Field mustard	nucleus	90.74	48.04
Bra020409.1-P	Field mustard	nucleus	74.69	38.05
AT5G57830.1	Thale cress	nucleus	79.63	33.33
Bra002693.1-P	Field mustard	nucleus	75.31	33.15
Bra002694.1-P	Field mustard	nucleus	75.31	33.15
Bra034886.1-P	Field mustard	cytosol	12.96	16.41
VIT_11s0037g00610.t01	Wine grape	nucleus	46.91	16.2
PGSC0003DMT400028965	Potato	nucleus	38.89	13.91
Bra039233.1-P	Field mustard	nucleus	27.78	13.8
PGSC0003DMT400023950	Potato	nucleus	37.65	13.71
Solyc07g005910.2.1	Tomato	nucleus	38.27	13.69
KRH55008	Soybean	cytosol	13.58	13.66
Solyc11g020850.1.1	Tomato	nucleus	37.65	11.62
KRH03013	Soybean	nucleus	33.33	11.39
KRH63109	Soybean	nucleus	31.48	11.06
KRH72337	Soybean	nucleus	31.48	10.87
KRH37764	Soybean	nucleus	29.63	10.48
TraesCS5B01G405000.1	Wheat	nucleus	24.07	10.34
Bra011226.1-P	Field mustard	cytosol	20.99	10.33
KRH12784	Soybean	nucleus	29.01	10.31
TraesCS5A01G400200.1	Wheat	nucleus	24.07	10.29
TraesCS5D01G410200.1	Wheat	nucleus	23.46	10.03
Zm00001d024102_P002	Maize	nucleus	20.37	9.32
HORVU5Hr1G097200.5	Barley	cytosol	24.07	9.11
Bra032692.1-P	Field mustard	extracellular, plasma membrane	14.2	8.81
OQU80230	Sorghum	cytosol	20.99	8.5
Os08t0269000-01	Rice	cytosol, golgi, nucleus	14.81	8.28
Bra028728.1-P	Field mustard	nucleus	20.37	8.11
GSMUA_Achr10P...	Banana	nucleus	22.84	7.68
Bra014792.1-P	Field mustard	cytosol	18.52	7.54
Os08t0442350-01	Rice	nucleus	21.6	7.03
Bra007093.1-P	Field mustard	nucleus	17.28	6.9
TraesCS7D01G282800.1	Wheat	nucleus	18.52	6.88
Solyc12g009900.1.1	Tomato	cytosol	26.54	6.75
OQU80548	Sorghum	nucleus	21.6	6.63
Bra009206.1-P	Field mustard	nucleus	17.28	6.56
TraesCS7B01G199800.1	Wheat	nucleus	17.9	6.55
PGSC0003DMT400020469	Potato	cytosol	27.16	6.34
TraesCS7A01G285400.1	Wheat	nucleus	17.28	6.32
Bra034805.1-P	Field mustard	nucleus	17.28	6.26
Bra038684.1-P	Field mustard	nucleus	14.81	5.96
Zm00001d032145_P001	Maize	nucleus	21.6	5.65
Bra032725.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	18.52	5.43
Bra015360.1-P	Field mustard	endoplasmic reticulum, extracellular	14.81	4.6
Bra025705.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	14.2	4.44
Bra031059.1-P	Field mustard	endoplasmic reticulum, vacuole	13.58	4.31
Bra008601.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	17.9	4.2
Bra003783.1-P	Field mustard	extracellular, plasma membrane	11.11	3.8
Bra015891.1-P	Field mustard	endoplasmic reticulum, golgi	12.35	3.68
Bra018297.1-P	Field mustard	endoplasmic reticulum, extracellular	14.81	3.5
Bra021657.1-P	Field mustard	endoplasmic reticulum	14.81	3.23
Bra016190.1-P	Field mustard	mitochondrion	16.67	3.1
Bra018599.1-P	Field mustard	extracellular, vacuole	13.58	2.3
Bra030742.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid, vacuole	12.96	1.82

Protein Annotations

EnsemblPlants:Bra006800.1	EnsemblPlants:Bra006800.1-P	EnsemblPlantsGene:Bra006800	InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil
PANTHER:PTHR31422	PANTHER:PTHR31422:SF1	PFAM:PF04576	PFscan:PS51775	UniParc:UPI000253FC92	UniProt:M4CRF9
MapMan:35.2	:	:	:	:	:

Description

AT5G57830 (E=3e-032) | unknown protein

Coordinates

chrA03:+:5085332..5085887

Molecular Weight (calculated)

18606.0 Da

IEP (calculated)

4.996

GRAVY (calculated)

-0.555

Length

162 amino acids

Sequence
(BLAST)

001: MILRLQEEKA ALEMEASQYN RMAEEKMCHA ETSLTLFEDL IYRKEMEMAS RVSGVESGSL SPRQDLSVCW EEIRRIDDHV REVSESRDVA KGSKWSLLRH
101: ESISHALVSQ VSNTILESAK SDVSSIMEMI KNPERFSASD EVPRTKESLT IISEERNVSH RF

Best Arabidopsis Sequence Match ( AT5G57830.1 )
(BLAST)

001: MVERTMSLGV GGNGETSGVR ETMWAQQELL QKINQELDAE REASSSAASE ALSMILRLQG EKAALEMEAS QYKRMAEEKM CHAETSLVLF EDLIYQKEME
101: IASLEFQVQA YRCKLLSLGC SDPAVIENKF PETLIFSGEN SRGNQKRKMK RNLSSPFDGI SSERSLLLSD VNGESFEEKK GLVESSSVSP REDLNAYWEQ
201: IRRIDEHVRE ISDSRDTQKA SKFPLIRRES ISHALVSQVS NTILESAKSD VSSIMEMMKN PERFSVKDAS LETPILSPKN VQDIFEVPRT KESLTIISEE
301: EEAEERNVRG KMVTSNYDRK VSKPPRDTSI KGEHLSLLKE IREQLNVMQS EMRSLRSELH HQSKPVSNPE EDLVLNSIQE AMIHFWL

Arabidopsis Description

Protein of unknown function, DUF593 [Source:TAIR;Acc:AT5G57830]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.