Factsheet for Bra014792.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76130	Canola	cytosol	97.24	97.24
AT3G54740.3	Thale cress	cytosol, nucleus, peroxisome	79.4	72.15
Bra007093.1-P	Field mustard	nucleus	71.86	70.44
Bra028728.1-P	Field mustard	nucleus	42.96	42.01
Bra009206.1-P	Field mustard	nucleus	42.96	40.05
Bra034805.1-P	Field mustard	nucleus	43.97	39.15
Bra038684.1-P	Field mustard	nucleus	32.66	32.26
Bra034886.1-P	Field mustard	cytosol	9.3	28.91
Bra006798.1-P	Field mustard	nucleus	15.08	19.61
Bra039233.1-P	Field mustard	nucleus	15.33	18.71
Bra006800.1-P	Field mustard	cytosol	7.54	18.52
Bra002693.1-P	Field mustard	nucleus	16.58	17.93
Bra020409.1-P	Field mustard	nucleus	14.32	17.92
Bra002694.1-P	Field mustard	nucleus	16.33	17.66
Bra032692.1-P	Field mustard	extracellular, plasma membrane	11.06	16.86
Bra011226.1-P	Field mustard	cytosol	13.82	16.72
Bra015360.1-P	Field mustard	endoplasmic reticulum, extracellular	16.33	12.45
Bra032725.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	17.09	12.32
Bra003783.1-P	Field mustard	extracellular, plasma membrane	13.07	10.97
Bra031059.1-P	Field mustard	endoplasmic reticulum, vacuole	13.82	10.76
Bra025705.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	13.82	10.62
Bra015891.1-P	Field mustard	endoplasmic reticulum, golgi	13.57	9.94
Bra008601.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	15.58	8.99
Bra016190.1-P	Field mustard	mitochondrion	18.59	8.5
Bra018297.1-P	Field mustard	endoplasmic reticulum, extracellular	11.06	6.42
Bra018599.1-P	Field mustard	extracellular, vacuole	15.33	6.37
Bra021657.1-P	Field mustard	endoplasmic reticulum	10.55	5.66
Bra030742.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid, vacuole	15.58	5.38

Protein Annotations

EnsemblPlants:Bra014792.1	EnsemblPlants:Bra014792.1-P	EnsemblPlantsGene:Bra014792	InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil
PANTHER:PTHR31422	PANTHER:PTHR31422:SF0	PFAM:PF04576	PFscan:PS51775	SEG:seg	UniParc:UPI0002544D05
UniProt:M4DE73	MapMan:35.1	:	:	:	:

Description

AT3G54740 (E=3e-151) | unknown protein

Coordinates

chrA04:-:3185160..3186535

Molecular Weight (calculated)

45093.2 Da

IEP (calculated)

4.650

GRAVY (calculated)

-0.537

Length

398 amino acids

Sequence
(BLAST)

001: MESSRDAMKG CDYSLDAYSS DPLTRTVESE NMLLLRGSYD SSSNECAALL EDHTSQGKTV KDLHLELEEE RNAAASAANE TMSMILRLQR EKAEIQMEAR
101: QFKAFAEETM MHEQEKVSAL EELVYEKEQA IEALSYEVEA YKDKLMSYGV TEAEMLGFGR DFVDDYPCEY TSLRCSVEDE NLSESDGDVE VVEKVMVGQS
201: PRWSYYDPNS PLGTAKEVKG TFYTDSPMST SNARVYTIDS VHVGDSEVKI DDESSKMSKG TLDGDHWKSL TQQGVKEPDI EKLYTRLQAL EADRESLRQV
301: IVSMRTDQAQ LVLLKEIAQH LSKETVVTRR NPVSKMPFLK AFSVGTVFKW IVSFVAWRRK AKPNKYAYHL PANNMGMLMI LGEGCPTRRW NCLTSSYV

Best Arabidopsis Sequence Match ( AT3G54740.5 )
(BLAST)

001: MDSELSFSSR DVVNCCEYGC DYSLGACSSD PLARTVKRKF NEFKEGNNMM LLRGSSDSSS SNAKILVENE CAALLEALSS QRETVKDLHL ELEEERNAAA
101: SAANETMSMI LRLQREKAEI QMEARQFKMF AQEKMTHDQE KLSVLENLLY EKEQAIEALT YEVEAYKHRL LSYGVSEAEI HDQILGFGRD SSTVGFDVYP
201: CEYTSLECSV DENPSGPDGN FEIEEKVMVG QSPRWPYYDP NSPLGTAKDI KGASFADSPM SSSSDRVYTI DSIHVGVSEV KIDDEPNKMS KGKLNGDHWN
301: SPRYQEPFTT QQGVNEPDIE KLYTRLQALE ADRESLRQII VSMRTDKAQL VLLKEIAQHL TKETGATSRR NPVSKMPSLK VFSVVTVFKW IVSFVSWKRK
401: ARQNKYVYEL SANNMGMLMI LGEGSGTRRW RCLTSSHV

Arabidopsis Description

Uncharacterized protein T5N23_100 [Source:UniProtKB/TrEMBL;Acc:Q9M1S6]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.