Factsheet for Bra002693.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51277	Canola	nucleus	99.46	99.46
Bra002694.1-P	Field mustard	nucleus	98.37	98.37
CDY50792	Canola	nucleus	95.38	95.38
AT5G57830.1	Thale cress	nucleus	85.05	80.88
Bra020409.1-P	Field mustard	nucleus	67.66	78.3
Bra006798.1-P	Field mustard	nucleus	63.86	76.8
Bra006800.1-P	Field mustard	cytosol	33.15	75.31
VIT_11s0037g00610.t01	Wine grape	nucleus	45.65	35.82
Solyc07g005910.2.1	Tomato	nucleus	39.67	32.23
PGSC0003DMT400023950	Potato	nucleus	38.59	31.91
PGSC0003DMT400028965	Potato	nucleus	39.13	31.79
Bra039233.1-P	Field mustard	nucleus	27.99	31.6
KRH55008	Soybean	cytosol	13.32	30.43
Bra011226.1-P	Field mustard	cytosol	26.09	29.18
KRH63109	Soybean	nucleus	35.6	28.42
Bra034886.1-P	Field mustard	cytosol	9.78	28.12
KRH37764	Soybean	nucleus	34.51	27.73
KRH72337	Soybean	nucleus	34.78	27.29
KRH03013	Soybean	nucleus	35.05	27.22
KRH12784	Soybean	nucleus	33.15	26.75
Solyc11g020850.1.1	Tomato	nucleus	37.5	26.29
TraesCS5A01G400200.1	Wheat	nucleus	22.28	21.64
TraesCS5B01G405000.1	Wheat	nucleus	22.01	21.49
TraesCS5D01G410200.1	Wheat	nucleus	21.74	21.11
Os08t0269000-01	Rice	cytosol, golgi, nucleus	16.03	20.34
TraesCS7D01G282800.1	Wheat	nucleus	23.1	19.5
Bra028728.1-P	Field mustard	nucleus	21.47	19.41
Zm00001d024102_P002	Maize	nucleus	18.48	19.21
TraesCS7B01G199800.1	Wheat	nucleus	22.83	18.96
TraesCS7A01G285400.1	Wheat	nucleus	22.83	18.96
Os08t0442350-01	Rice	nucleus	25.27	18.67
HORVU5Hr1G097200.5	Barley	cytosol	21.2	18.22
OQU80548	Sorghum	nucleus	24.73	17.23
Bra009206.1-P	Field mustard	nucleus	19.84	17.1
GSMUA_Achr10P...	Banana	nucleus	22.01	16.8
OQU80230	Sorghum	cytosol	18.21	16.75
Bra014792.1-P	Field mustard	cytosol	17.93	16.58
Bra034805.1-P	Field mustard	nucleus	19.57	16.11
Bra007093.1-P	Field mustard	nucleus	17.66	16.01
Bra038684.1-P	Field mustard	nucleus	17.39	15.88
Bra032692.1-P	Field mustard	extracellular, plasma membrane	11.14	15.71
Solyc12g009900.1.1	Tomato	cytosol	25.82	14.91
PGSC0003DMT400020469	Potato	cytosol	26.9	14.27
Zm00001d032145_P001	Maize	nucleus	21.47	12.76
Bra031059.1-P	Field mustard	endoplasmic reticulum, vacuole	13.86	9.98
Bra025705.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	13.32	9.46
Bra032725.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	14.13	9.42
Bra015360.1-P	Field mustard	endoplasmic reticulum, extracellular	13.32	9.39
Bra003783.1-P	Field mustard	extracellular, plasma membrane	11.14	8.65
Bra015891.1-P	Field mustard	endoplasmic reticulum, golgi	12.23	8.29
Bra008601.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	14.13	7.54
Bra016190.1-P	Field mustard	mitochondrion	15.22	6.43
Bra018297.1-P	Field mustard	endoplasmic reticulum, extracellular	11.41	6.13
Bra021657.1-P	Field mustard	endoplasmic reticulum	11.41	5.66
Bra018599.1-P	Field mustard	extracellular, vacuole	12.5	4.8
Bra030742.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid, vacuole	10.87	3.47

Protein Annotations

EnsemblPlants:Bra002693.1	EnsemblPlants:Bra002693.1-P	EnsemblPlantsGene:Bra002693	InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil
PANTHER:PTHR31422	PANTHER:PTHR31422:SF1	PFAM:PF04576	PFscan:PS51775	SEG:seg	UniParc:UPI0002545167
UniProt:M4CER2	MapMan:35.1	:	:	:	:

Description

AT5G57830 (E=2e-144) | unknown protein

Coordinates

chrA10:-:8218590..8220229

Molecular Weight (calculated)

41942.8 Da

IEP (calculated)

5.030

GRAVY (calculated)

-0.663

Length

368 amino acids

Sequence
(BLAST)

001: MVERTMSLGI GLNGESSGGR ETMWAQQELL QKINQELDAE REASSSAASE ALSMILRLQG EKAALEMEAS QYKRMAEEKM CHAETSLALF EDLIYQKEME
101: IASLEFQVQA YRCKLLSLGC SDPAVVENRF PENLIFFGDT SRLNQKKKMK RNLSSPFDGM TSERRLLLSD NEGFEEKKGL ESSLSPREDL STYWEQIRRI
201: DAHVREISES RDAPKESKRP LIKRESVSHA LVSQVSNTIL ESAKSDVNTI MEMLKNPDHK VSAKDESPNV QDIFEVPRTK ESLFIISEEE EHEERSGRGK
301: LLSKPPRDTS IKAEHMSLLK EIREQLNGMQ SEMRSLRSEL HLTPPVSSHH EEDGVLNSVQ EAMIHFWL

Best Arabidopsis Sequence Match ( AT5G57830.1 )
(BLAST)

001: MVERTMSLGV GGNGETSGVR ETMWAQQELL QKINQELDAE REASSSAASE ALSMILRLQG EKAALEMEAS QYKRMAEEKM CHAETSLVLF EDLIYQKEME
101: IASLEFQVQA YRCKLLSLGC SDPAVIENKF PETLIFSGEN SRGNQKRKMK RNLSSPFDGI SSERSLLLSD VNGESFEEKK GLVESSSVSP REDLNAYWEQ
201: IRRIDEHVRE ISDSRDTQKA SKFPLIRRES ISHALVSQVS NTILESAKSD VSSIMEMMKN PERFSVKDAS LETPILSPKN VQDIFEVPRT KESLTIISEE
301: EEAEERNVRG KMVTSNYDRK VSKPPRDTSI KGEHLSLLKE IREQLNVMQS EMRSLRSELH HQSKPVSNPE EDLVLNSIQE AMIHFWL

Arabidopsis Description

Protein of unknown function, DUF593 [Source:TAIR;Acc:AT5G57830]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.