Factsheet for Bra011226.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY28219	Canola	cytosol	84.8	94.9
AT4G30830.1	Thale cress	nucleus	66.57	60.33
Bra039233.1-P	Field mustard	nucleus	46.81	47.24
Bra006798.1-P	Field mustard	nucleus	25.53	27.45
KRH55008	Soybean	cytosol	13.07	26.71
VIT_11s0037g00610.t01	Wine grape	nucleus	37.69	26.44
Bra002693.1-P	Field mustard	nucleus	29.18	26.09
Bra034886.1-P	Field mustard	cytosol	9.73	25.0
Bra002694.1-P	Field mustard	nucleus	27.96	25.0
Bra020409.1-P	Field mustard	nucleus	23.4	24.21
KRH37764	Soybean	nucleus	32.52	23.36
KRH12784	Soybean	nucleus	31.31	22.59
Solyc07g005910.2.1	Tomato	nucleus	30.4	22.08
KRH63109	Soybean	nucleus	30.7	21.91
KRH72337	Soybean	nucleus	31.0	21.75
PGSC0003DMT400028965	Potato	nucleus	29.79	21.63
PGSC0003DMT400023950	Potato	nucleus	28.57	21.12
Bra006800.1-P	Field mustard	cytosol	10.33	20.99
KRH03013	Soybean	nucleus	30.09	20.89
Os08t0269000-01	Rice	cytosol, golgi, nucleus	16.72	18.97
Solyc11g020850.1.1	Tomato	nucleus	28.27	17.71
TraesCS5D01G410200.1	Wheat	nucleus	19.45	16.89
TraesCS5A01G400200.1	Wheat	nucleus	19.15	16.62
TraesCS5B01G405000.1	Wheat	nucleus	18.84	16.45
Zm00001d024102_P002	Maize	nucleus	17.63	16.38
Os08t0442350-01	Rice	nucleus	24.62	16.27
TraesCS7D01G282800.1	Wheat	nucleus	20.67	15.6
TraesCS7A01G285400.1	Wheat	nucleus	20.97	15.58
TraesCS7B01G199800.1	Wheat	nucleus	20.97	15.58
GSMUA_Achr10P...	Banana	nucleus	22.8	15.56
HORVU5Hr1G097200.5	Barley	cytosol	19.45	14.95
OQU80230	Sorghum	cytosol	17.63	14.5
OQU80548	Sorghum	nucleus	22.8	14.2
Bra032692.1-P	Field mustard	extracellular, plasma membrane	11.25	14.18
Bra028728.1-P	Field mustard	nucleus	17.33	14.0
Bra014792.1-P	Field mustard	cytosol	16.72	13.82
Bra009206.1-P	Field mustard	nucleus	17.63	13.58
Bra007093.1-P	Field mustard	nucleus	16.11	13.05
Bra038684.1-P	Field mustard	nucleus	15.81	12.9
Bra034805.1-P	Field mustard	nucleus	16.72	12.3
Solyc12g009900.1.1	Tomato	cytosol	23.71	12.24
Zm00001d032145_P001	Maize	nucleus	20.97	11.15
PGSC0003DMT400020469	Potato	cytosol	22.49	10.66
Bra032725.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	15.81	9.42
Bra015360.1-P	Field mustard	endoplasmic reticulum, extracellular	14.59	9.2
Bra003783.1-P	Field mustard	extracellular, plasma membrane	12.46	8.65
Bra031059.1-P	Field mustard	endoplasmic reticulum, vacuole	12.16	7.83
Bra025705.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	11.55	7.34
Bra015891.1-P	Field mustard	endoplasmic reticulum, golgi	11.85	7.18
Bra016190.1-P	Field mustard	mitochondrion	17.63	6.66
Bra008601.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	13.68	6.52
Bra018297.1-P	Field mustard	endoplasmic reticulum, extracellular	12.77	6.13
Bra021657.1-P	Field mustard	endoplasmic reticulum	12.46	5.53
Bra018599.1-P	Field mustard	extracellular, vacuole	13.37	4.59
Bra030742.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid, vacuole	13.37	3.82

Protein Annotations

EnsemblPlants:Bra011226.1	EnsemblPlants:Bra011226.1-P	EnsemblPlantsGene:Bra011226	InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil
PANTHER:PTHR31422	PANTHER:PTHR31422:SF1	PFAM:PF04576	PFscan:PS51775	SEG:seg	UniParc:UPI0002546BC0
UniProt:M4D422	MapMan:35.2	:	:	:	:

Description

AT4G30830 (E=2e-040) | unknown protein

Coordinates

chrA01:+:3200419..3201408

Molecular Weight (calculated)

38291.7 Da

IEP (calculated)

6.309

GRAVY (calculated)

-0.692

Length

329 amino acids

Sequence
(BLAST)

001: MLERSHSLRI PGAEILDLRI ALYEHKEVIE RLQDELHAER EASATSASEA LSMILRLQGE KADLAREAGK YKRIAEEEIS HAEMWFAHLE DFIHQKENVI
101: TALECQVYAY RSQLLSLGHS DLTSLDVKLQ ENDKNKSLSD RSHIPFPELA NDLSIPVEKE VIEESLDSKK SYFDVYWDHI KKLDEKVKEL KTEDALKMKV
201: AKQTKMKKKS TKQTRDRSGK RDRAEYQSEM QRLRERVEQL EKEKTKTEPE TSGVILMEMK EEVRSVQSSE EKRSNTMENL QPWIDPAIVS VQEVHSSRSF
301: ISKTYSVFLL ELSKHLACLL KQAMLNFWL

Best Arabidopsis Sequence Match ( AT4G30830.1 )
(BLAST)

001: MVERSRSFRI PGAETNDLRI ALYERKEVIE RLQEELNAER EASETSANEA MSMILRLQGE KAELAMEADQ YKRMVEEQMS HAEMSFALLE DVIYQKEIEV
101: TALAYQVEVY RSQLLSLGFN DLKSLDVKLQ EDDDQDENML KMNDFSLSDR SQTPSPELVT DLSIPEEKEV IEQSLESQKS SLDVYWEQIK KLNEQVKELT
201: GFRDSMRDQH RTSVSESRGE EDFASSSNFQ EVTQERKKEA KGLSKTTDDT MMIKVSKQTK MEKKPSKQTR DRSGKRNRAE YQAELQRLRQ RVERLERGKS
301: NTEPETSGVI KQEEISLLKE VKEELSSVQS SDVKKSLNTM ENLQPWVDPT IISVQEAMLY FWL

Arabidopsis Description

Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q1PE31]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.