Factsheet for Bra038684.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67532	Canola	nucleus	91.07	88.01
Bra034805.1-P	Field mustard	nucleus	68.24	61.52
AT3G11850.2	Thale cress	nucleus	62.03	49.6
Bra009206.1-P	Field mustard	nucleus	51.12	48.24
Bra028728.1-P	Field mustard	nucleus	45.91	45.45
VIT_08s0032g00720.t01	Wine grape	plastid	47.15	36.54
KRH68055	Soybean	cytosol	40.2	34.62
GSMUA_Achr8P26680_001	Banana	cytosol	25.06	33.33
Bra014792.1-P	Field mustard	cytosol	32.26	32.66
GSMUA_Achr1P14210_001	Banana	cytosol	28.54	32.21
Bra007093.1-P	Field mustard	nucleus	32.26	32.02
GSMUA_Achr2P12800_001	Banana	cytosol, nucleus, plasma membrane	35.48	31.78
GSMUA_Achr3P15020_001	Banana	nucleus	35.24	31.49
GSMUA_Achr8P04680_001	Banana	cytosol, mitochondrion	28.29	30.4
Bra034886.1-P	Field mustard	cytosol	9.18	28.91
KRG96316	Soybean	cytosol	39.95	27.76
GSMUA_Achr4P22730_001	Banana	nucleus, plastid	32.26	27.25
TraesCS5D01G380300.1	Wheat	cytosol	26.3	26.63
Zm00001d033504_P001	Maize	nucleus	32.75	26.56
OQU91257	Sorghum	nucleus	32.51	25.64
Zm00001d013658_P001	Maize	nucleus	31.27	25.25
Os03t0650800-00	Rice	nucleus	31.27	25.2
TraesCS5B01G373100.1	Wheat	nucleus	31.02	25.0
TraesCS5A01G370700.1	Wheat	nucleus	19.85	24.02
TraesCS1D01G145300.1	Wheat	cytosol	22.08	23.42
TraesCS1A01G147200.1	Wheat	plastid	27.3	22.96
KXG28744	Sorghum	cytosol	25.81	22.96
Zm00001d023648_P003	Maize	plastid	26.8	22.78
TraesCS4A01G159000.1	Wheat	cytosol	24.81	22.78
TraesCS1B01G165300.1	Wheat	plastid	27.05	22.76
HORVU4Hr1G041430.2	Barley	cytosol	23.82	22.7
HORVU0Hr1G000300.2	Barley	cytosol	24.32	22.32
Os12t0488700-00	Rice	cytosol	26.8	21.3
Zm00001d007503_P001	Maize	nucleus	24.07	21.27
HORVU5Hr1G092270.4	Barley	cytosol, plastid	21.09	20.53
OQU79118	Sorghum	plastid	12.16	20.16
Bra032692.1-P	Field mustard	extracellular, plasma membrane	12.66	19.54
Bra002694.1-P	Field mustard	nucleus	15.88	17.39
Bra002693.1-P	Field mustard	nucleus	15.88	17.39
Bra020409.1-P	Field mustard	nucleus	13.65	17.3
Bra006798.1-P	Field mustard	nucleus	12.66	16.67
Bra039233.1-P	Field mustard	nucleus	13.4	16.56
Bra011226.1-P	Field mustard	cytosol	12.9	15.81
Bra006800.1-P	Field mustard	cytosol	5.96	14.81
Bra032725.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	15.88	11.59
Bra015360.1-P	Field mustard	endoplasmic reticulum, extracellular	13.9	10.73
Bra003783.1-P	Field mustard	extracellular, plasma membrane	12.41	10.55
Bra015891.1-P	Field mustard	endoplasmic reticulum, golgi	14.14	10.5
Bra025705.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	13.15	10.23
Bra031059.1-P	Field mustard	endoplasmic reticulum, vacuole	12.9	10.18
Bra008601.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	17.37	10.14
Bra016190.1-P	Field mustard	mitochondrion	17.62	8.15
Bra018297.1-P	Field mustard	endoplasmic reticulum, extracellular	10.67	6.28
Bra021657.1-P	Field mustard	endoplasmic reticulum	10.92	5.93
Bra018599.1-P	Field mustard	extracellular, vacuole	13.4	5.64
Bra030742.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid, vacuole	13.65	4.77

Protein Annotations

EnsemblPlants:Bra038684.1	EnsemblPlants:Bra038684.1-P	EnsemblPlantsGene:Bra038684	InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil
PANTHER:PTHR31422	PANTHER:PTHR31422:SF0	PFAM:PF04576	PFscan:PS51775	UniParc:UPI0002545422	UniProt:M4FC68
MapMan:35.1	:	:	:	:	:

Description

AT5G06560 (E=3e-057) | unknown protein

Coordinates

chrA01:+:26626811..26628366

Molecular Weight (calculated)

45530.9 Da

IEP (calculated)

4.602

GRAVY (calculated)

-0.798

Length

403 amino acids

Sequence
(BLAST)

001: MESRDLIQCC DCGCHHSSPR SNNNQFSNNP KVHIENECEL LRQTVTSQQQ SIQDLYDELE KERNAASSAA DESMNVMQRL QHDKAELQME LRQYKVYAGE
101: KMEHDLQEIL ALEEVVSQRE QTILALECEA QGYKHRMMSY GITEGEANGD MSLVDAYDYD YEYPSLKCNI NENQDSLGAD VYVADDENYP PADSPRGRVH
201: LRSLDQRISQ IETNPSLDGG FRVASEKDDV FVESENYKHV SYTENDDNAK GGGDSLDIGD EMSDRVYTID SGHHGGVTEQ KVEVGNVEQV EHGDPDITKL
301: YMRLQALEAD RESMKEALLS MRTEKAQMVL LKELAQHLSK EVVPQRRLPL RKTSADGTLA FTPVFKVHVW DVNKQHGSAN GSRKGPSITE LAMSQEHTSV
401: KHI

Best Arabidopsis Sequence Match ( AT3G11850.2 )
(BLAST)

001: MESPIKCCDC GCDCCSSSPG SWIRSVKKRR HDELQTEKRF SIPELDDLDM FSNPRVQIEN ECELLRETVS NQQQTIQDLY HELEQERIAS STAADETVKM
101: IQTLEREKAK IDLELKQLQR SVDETLNYEN QEIEALENMV YQRDQTIQAL TFETQAYKHR MMSFGLTEAE ADGERSLLSR NPSMIDFSSE YDCPTQDYPP
201: LKCNINENQD PLEADIYVAD DENYPPADSP HGRVHLKTLD RRLSQMETNP SFTQLNRGRD VSEKGMVGES PRRQRHFRRI SPTGSSSSHL GASKELRPDV
301: FVDSPRSQSY SSKKMEDVSY TENNNAKDDL SEIGDDMSDR VYTIDSVHHS SVAHSGGVAE QKIEDGASDG NVVFPREHTD LGDPDITKLY MRLQALEADR
401: ESMKHALLSM RTEKAQMVLL KEIAQHLSKE VVPQRRLPLR KASIAGPLTF TPVFKWITSF VSWKRKARRS KYMYGMSGNN IGLQMLLEKV PRSRKWRCLR
501: STQV

Arabidopsis Description

F26K24.14 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF14]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.