CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023648_P003	Maize	plastid	86.42	44.3
TraesCS1D01G145300.1	Wheat	cytosol	67.49	43.16
Solyc11g045480.1.1	Tomato	mitochondrion	29.22	34.98
TraesCS1B01G165300.1	Wheat	plastid	67.9	34.45
TraesCS1A01G147200.1	Wheat	plastid	67.9	34.45
Os12t0488700-00	Rice	cytosol	69.14	33.14
CDY07525	Canola	peroxisome	12.76	32.29
HORVU0Hr1G000300.2	Barley	cytosol	54.32	30.07
GSMUA_Achr8P26680_001	Banana	cytosol	30.86	24.75
KXG28744	Sorghum	cytosol	43.21	23.18
GSMUA_Achr1P14210_001	Banana	cytosol	33.74	22.97
GSMUA_Achr8P04680_001	Banana	cytosol, mitochondrion	30.04	19.47
Bra028728.1-P	Field mustard	nucleus	32.51	19.41
KRH32933	Soybean	nucleus	35.39	17.55
KRH71751	Soybean	nucleus	34.16	16.94
KRH68055	Soybean	cytosol	32.1	16.67
Bra009206.1-P	Field mustard	nucleus	28.81	16.39
VIT_08s0032g00720.t01	Wine grape	plastid	33.74	15.77
GSMUA_Achr3P15020_001	Banana	nucleus	29.22	15.74
PGSC0003DMT400022326	Potato	nucleus	32.1	15.73
Bra034805.1-P	Field mustard	nucleus	28.81	15.66
PGSC0003DMT400072288	Potato	plastid	32.51	15.31
AT5G06560.1	Thale cress	nucleus	32.51	15.25
AT3G11850.2	Thale cress	nucleus	30.86	14.88
OQU91257	Sorghum	nucleus	28.4	13.5
KRG96316	Soybean	cytosol	29.22	12.24
Bra038684.1-P	Field mustard	nucleus	20.16	12.16
OQU80230	Sorghum	cytosol	8.23	5.0
OQU91677	Sorghum	endoplasmic reticulum, golgi	9.88	5.0
CDY07526	Canola	nucleus	5.76	4.86
OQU80548	Sorghum	nucleus	9.05	4.17
EER95149	Sorghum	mitochondrion	13.17	3.67
EER93280	Sorghum	golgi, vacuole	10.7	3.62
KXG38537	Sorghum	golgi, plasma membrane, plastid	7.82	3.38
EES01549	Sorghum	golgi	9.88	2.65
EER92810	Sorghum	mitochondrion	7.0	2.15
OQU91120	Sorghum	endoplasmic reticulum, plastid	8.23	1.92

Protein Annotations

EnsemblPlants:OQU79118	EnsemblPlantsGene:SORBI_3008G098098	ncoils:Coil	PANTHER:PTHR31422	PANTHER:PTHR31422:SF0	ProteinID:OQU79118
ProteinID:OQU79118.1	SEG:seg	UniParc:UPI000B8BA534	UniProt:A0A1Z5R5S6	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr8:+:46579370..46580681

Molecular Weight (calculated)

26158.4 Da

IEP (calculated)

9.405

GRAVY (calculated)

-0.379

Length

243 amino acids

Sequence
(BLAST)

001: MAAANTTPII RVAPGSAFPR QARAYSDDSL DLYDGDCFPD DDCGASDRVY TVDAIHGAPL AVPEGGSYGG GGTPMGSDCG YGGAPWTEDE EVRRLSARMQ
101: ALEADRESMR QAIISMGTEK AQVTLLKEIA QKLCKEAAAP PVPAAVAQQS FYKGGNTQPA MTVTVRPPRH PPVLMQRKVV QRQPSLFAAV VKWVTSIMWW
201: RKKSSRVKYP IGQCGNNVGL LLLLDKAPRA GPGQGHQRPP KKI

Best Arabidopsis Sequence Match ( AT5G06560.1 )
(BLAST)

001: MDLAIVSSPT RDVVRCCDCG CDCSLNGASP GSLLRSVKRK YEEFENEKLF HIPELELDLS SNAKVQIENE LELLRETVSS QQQSIQDLYE ELDEERNAAS
101: TAASEAMSMI LRLQRDKAEL QMELRQFKRF AEEKMEHDQQ ELLDLEDLIY KREQTIQALT FEAQAYKHRM MSFGFTEAEV ETEKNMLSRN PSMIENDYQY
201: DLPTSDYPPI KCNVNENPGP LEADIDVDDV EKYPLADSPH PLKTLERRIS QMERNPSFTQ PTGDVSGGRH YTEKNVVGQS PRHQRHFRRV STGSASSLLG
301: TTREKRLDFS NDSPRSNNGS FRKMEDPPYA AGNSFARDKG DSSEIGDNDM NDRVYTIDSV HHSVSHSGTA EQKFKNDTAD GYAMSPREIS NQPDLGDPEI
401: SKLYMRLQAL EADRESMRQA IMSMRTEKAQ MVLLKEIAQH LSKDVVPERR LPLRKTSIIG AFNFISVFKW ITSFVFWRRK ARRSKYMNGV QGNNMGLQML
501: LEKTPRIRQW RCLSSTQV

Arabidopsis Description

MYOB7Myosin-binding protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG14]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.