CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007503_P001	Maize	nucleus	82.34	81.8
TraesCS4A01G159000.1	Wheat	cytosol	56.51	58.31
HORVU4Hr1G041430.2	Barley	cytosol	49.67	53.19
OQU79118	Sorghum	plastid	23.18	43.21
GSMUA_Achr8P26680_001	Banana	cytosol	27.37	40.92
GSMUA_Achr1P14210_001	Banana	cytosol	29.58	37.53
GSMUA_Achr8P04680_001	Banana	cytosol, mitochondrion	29.36	35.47
GSMUA_Achr3P15020_001	Banana	nucleus	34.22	34.37
Bra028728.1-P	Field mustard	nucleus	28.7	31.94
Solyc11g045480.1.1	Tomato	mitochondrion	14.13	31.53
CDY07525	Canola	peroxisome	6.62	31.25
KRH68055	Soybean	cytosol	32.01	30.98
Bra009206.1-P	Field mustard	nucleus	29.14	30.91
KRH71751	Soybean	nucleus	32.45	30.0
KRH32933	Soybean	nucleus	32.23	29.8
OQU91257	Sorghum	nucleus	32.67	28.96
AT5G06560.1	Thale cress	nucleus	32.45	28.38
VIT_08s0032g00720.t01	Wine grape	plastid	32.23	28.08
Bra034805.1-P	Field mustard	nucleus	27.37	27.74
PGSC0003DMT400022326	Potato	nucleus	30.24	27.62
PGSC0003DMT400072288	Potato	plastid	31.35	27.52
AT3G11850.2	Thale cress	nucleus	28.92	25.99
Bra038684.1-P	Field mustard	nucleus	22.96	25.81
KRG96316	Soybean	cytosol	30.24	23.62
CDY07526	Canola	nucleus	14.57	22.92
OQU91677	Sorghum	endoplasmic reticulum, golgi	19.43	18.33
OQU80230	Sorghum	cytosol	15.01	17.0
KXG38537	Sorghum	golgi, plasma membrane, plastid	14.13	11.39
OQU80548	Sorghum	nucleus	13.24	11.36
EER93280	Sorghum	golgi, vacuole	16.11	10.17
EER95149	Sorghum	mitochondrion	16.56	8.61
EER92810	Sorghum	mitochondrion	14.57	8.35
EES01549	Sorghum	golgi	14.13	7.06
OQU91120	Sorghum	endoplasmic reticulum, plastid	16.11	6.99

Protein Annotations

EnsemblPlants:KXG28744	EnsemblPlantsGene:SORBI_3005G160900	InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil	PANTHER:PTHR31422
PANTHER:PTHR31422:SF0	PFAM:PF04576	PFscan:PS51775	ProteinID:KXG28744	ProteinID:KXG28744.1	SEG:seg
UniParc:UPI00081AE369	UniProt:A0A1B6PSU8	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:63461546..63466832

Molecular Weight (calculated)

49293.7 Da

IEP (calculated)

8.215

GRAVY (calculated)

-0.430

Length

453 amino acids

Sequence
(BLAST)

001: MAGEDPYSGV GPVDACPLCG GTGAGPPSRV ALAKRAPPAD AAVAVAAAPG GGDEASALRE QLARQRRGVA DLQAELEAER GAAEGAASEA MSMILRLQRD
101: KSEAMMEARQ YRRYAEERFA HDAAEVAALH DALDRRDHAV GALAARLRAC QARLLHLGFP ASPTAAADRP CSGSGSDDEY RSVRCLDHPA ADVGTPRTHH
201: LLNEIPSPED SDKAVVMFGS PRRRSSSRRH ARTLSGGDPY DCRVALADEF PLFTADRDAP DQDNDDEEAD RVYTVDAVHG VPVMAPEDCC YFGTTTREGA
301: PRAGAGGWAE EDEIQKLKAR LQALEADRES MRHAILSMGD EKAQVVLLRE IAQQLCRDTA PFPAVPLKVQ PRLQPVVTAQ RKVVKRQSSF ARIFIVTVIK
401: WVMSIFCRRR KSNRIRYPIG MCGSNVGLML VLDRFPKQRQ KKIPKRKLSA STL

Best Arabidopsis Sequence Match ( AT3G54740.4 )
(BLAST)

001: MMLLRGSSDS SSSNAKILVE NECAALLEAL SSQRETVKDL HLELEEERNA AASAANETMS MILRLQREKA EIQMEARQFK MFAQEKMTHD QEKLSVLENL
101: LYEKEQAIEA LTYEVEAYKH RLLSYGVSEA EIHDQILGFG RDSSTVGFDV YPCEYTSLEC SVDENPSGPD GNFEIEEKVM VGQSPRWPYY DPNSPLGTAK
201: DIKGASFADS PMSSSSDRVY TIDSIHVGVS EVKIDDEPNK MSKGKLNGDH WNSPRYQEPF TTQQGVNEPD IEKLYTRLQA LEADRESLRQ IIVSMRTDKA
301: QLVLLKEIAQ HLTKETGATS RRNPVSKMPS LKVFSVVTVF KWIVSFVSWK RKARQNKYVY ELSANNMGML MILGEGSGTR RWRCLTSSHV

Arabidopsis Description

Uncharacterized protein T5N23_100 [Source:UniProtKB/TrEMBL;Acc:Q9M1S6]
SUBAcon: [peroxisome,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.