Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08489 | Canola | nucleus | 54.76 | 71.32 |
| CDY01064 | Canola | nucleus | 62.5 | 70.63 |
| Bra034805.1-P | Field mustard | nucleus | 61.51 | 69.35 |
| CDY67532 | Canola | nucleus | 55.95 | 67.63 |
| Bra038684.1-P | Field mustard | nucleus | 49.6 | 62.03 |
| AT5G06560.1 | Thale cress | nucleus | 63.1 | 61.39 |
| VIT_08s0032g00720.t01 | Wine grape | plastid | 53.37 | 51.73 |
| KRH68055 | Soybean | cytosol | 43.45 | 46.79 |
| GSMUA_Achr8P26680_001 | Banana | cytosol | 24.21 | 40.26 |
| AT3G54740.3 | Thale cress | cytosol, nucleus, peroxisome | 34.92 | 40.18 |
| GSMUA_Achr1P14210_001 | Banana | cytosol | 28.37 | 40.06 |
| GSMUA_Achr3P15020_001 | Banana | nucleus | 33.93 | 37.92 |
| GSMUA_Achr8P04680_001 | Banana | cytosol, mitochondrion | 27.78 | 37.33 |
| GSMUA_Achr2P12800_001 | Banana | cytosol, nucleus, plasma membrane | 32.74 | 36.67 |
| KRG96316 | Soybean | cytosol | 40.08 | 34.83 |
| GSMUA_Achr4P22730_001 | Banana | nucleus, plastid | 32.34 | 34.17 |
| OQU79118 | Sorghum | plastid | 14.88 | 30.86 |
| TraesCS4A01G159000.1 | Wheat | cytosol | 26.39 | 30.3 |
| TraesCS1B01G165300.1 | Wheat | plastid | 27.98 | 29.44 |
| TraesCS1D01G145300.1 | Wheat | cytosol | 22.02 | 29.21 |
| TraesCS1A01G147200.1 | Wheat | plastid | 27.58 | 29.02 |
| KXG28744 | Sorghum | cytosol | 25.99 | 28.92 |
| TraesCS5D01G380300.1 | Wheat | cytosol | 22.82 | 28.89 |
| Os03t0650800-00 | Rice | nucleus | 28.57 | 28.8 |
| Zm00001d033504_P001 | Maize | nucleus | 28.37 | 28.77 |
| Zm00001d023648_P003 | Maize | plastid | 26.98 | 28.69 |
| TraesCS5B01G373100.1 | Wheat | nucleus | 28.37 | 28.6 |
| OQU91257 | Sorghum | nucleus | 28.37 | 27.98 |
| TraesCS5A01G370700.1 | Wheat | nucleus | 18.45 | 27.93 |
| Zm00001d007503_P001 | Maize | nucleus | 25.0 | 27.63 |
| Zm00001d013658_P001 | Maize | nucleus | 27.18 | 27.45 |
| Os12t0488700-00 | Rice | cytosol | 27.58 | 27.42 |
| HORVU4Hr1G041430.2 | Barley | cytosol | 22.62 | 26.95 |
| HORVU0Hr1G000300.2 | Barley | cytosol | 20.83 | 23.92 |
| HORVU5Hr1G092270.4 | Barley | cytosol, plastid | 19.64 | 23.91 |
| AT5G57830.1 | Thale cress | nucleus | 13.49 | 17.57 |
| AT2G24140.2 | Thale cress | nucleus | 10.52 | 16.36 |
| AT4G13160.1 | Thale cress | endoplasmic reticulum | 9.13 | 16.31 |
| AT4G30830.1 | Thale cress | nucleus | 11.31 | 15.7 |
| AT1G04890.1 | Thale cress | mitochondrion | 12.5 | 15.33 |
| AT5G16720.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 16.87 | 12.59 |
| AT4G13630.1 | Thale cress | extracellular, golgi | 13.69 | 12.13 |
| AT1G70750.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion | 16.47 | 11.08 |
| AT1G18990.1 | Thale cress | endoplasmic reticulum, plasma membrane | 11.31 | 10.88 |
| AT1G74830.1 | Thale cress | extracellular, golgi, vacuole | 11.51 | 10.7 |
| AT2G30690.2 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 8.33 | 5.53 |
| AT1G08800.1 | Thale cress | extracellular, vacuole | 11.31 | 5.12 |
Protein Annotations
| MapMan:35.1 | EntrezGene:820358 | ProteinID:AAF23201.1 | ProteinID:AEE75108.1 | ProteinID:AEE75109.1 | ArrayExpress:AT3G11850 |
| EnsemblPlantsGene:AT3G11850 | RefSeq:AT3G11850 | TAIR:AT3G11850 | RefSeq:AT3G11850-TAIR-G | EnsemblPlants:AT3G11850.2 | TAIR:AT3G11850.2 |
| EMBL:AY099765 | EMBL:AY128893 | Unigene:At.39680 | ncoils:Coil | InterPro:GTD-bd | InterPro:IPR007656 |
| RefSeq:NP_187791.1 | RefSeq:NP_974289.1 | PFAM:PF04576 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS51775 | PANTHER:PTHR31422 | PANTHER:PTHR31422:SF0 |
| UniProt:Q9SF14 | UniParc:UPI000009FE1D | SEG:seg | : | : | : |
Description
F26K24.14 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF14]
Coordinates
chr3:-:3738753..3741753
Molecular Weight (calculated)
57776.0 Da
IEP (calculated)
5.820
GRAVY (calculated)
-0.802
Length
504 amino acids
Sequence
(BLAST)
(BLAST)
001: MESPIKCCDC GCDCCSSSPG SWIRSVKKRR HDELQTEKRF SIPELDDLDM FSNPRVQIEN ECELLRETVS NQQQTIQDLY HELEQERIAS STAADETVKM
101: IQTLEREKAK IDLELKQLQR SVDETLNYEN QEIEALENMV YQRDQTIQAL TFETQAYKHR MMSFGLTEAE ADGERSLLSR NPSMIDFSSE YDCPTQDYPP
201: LKCNINENQD PLEADIYVAD DENYPPADSP HGRVHLKTLD RRLSQMETNP SFTQLNRGRD VSEKGMVGES PRRQRHFRRI SPTGSSSSHL GASKELRPDV
301: FVDSPRSQSY SSKKMEDVSY TENNNAKDDL SEIGDDMSDR VYTIDSVHHS SVAHSGGVAE QKIEDGASDG NVVFPREHTD LGDPDITKLY MRLQALEADR
401: ESMKHALLSM RTEKAQMVLL KEIAQHLSKE VVPQRRLPLR KASIAGPLTF TPVFKWITSF VSWKRKARRS KYMYGMSGNN IGLQMLLEKV PRSRKWRCLR
501: STQV
101: IQTLEREKAK IDLELKQLQR SVDETLNYEN QEIEALENMV YQRDQTIQAL TFETQAYKHR MMSFGLTEAE ADGERSLLSR NPSMIDFSSE YDCPTQDYPP
201: LKCNINENQD PLEADIYVAD DENYPPADSP HGRVHLKTLD RRLSQMETNP SFTQLNRGRD VSEKGMVGES PRRQRHFRRI SPTGSSSSHL GASKELRPDV
301: FVDSPRSQSY SSKKMEDVSY TENNNAKDDL SEIGDDMSDR VYTIDSVHHS SVAHSGGVAE QKIEDGASDG NVVFPREHTD LGDPDITKLY MRLQALEADR
401: ESMKHALLSM RTEKAQMVLL KEIAQHLSKE VVPQRRLPLR KASIAGPLTF TPVFKWITSF VSWKRKARRS KYMYGMSGNN IGLQMLLEKV PRSRKWRCLR
501: STQV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.