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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, endoplasmic reticulum, vacuole

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • endoplasmic reticulum 3
  • extracellular 2
  • golgi 3
  • plasma membrane 2
  • vacuole 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, vacuole
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX69426 Canola endoplasmic reticulum, golgi, plastid 76.3 75.29
CDY16985 Canola endoplasmic reticulum, golgi 75.26 74.82
Bra008601.1-P Field mustard endoplasmic reticulum, golgi, plastid 74.52 72.9
Zm00001d033125_P001 Maize nucleus 9.04 38.36
Os03t0708700-00 Rice cytosol, nucleus 21.63 33.41
VIT_14s0006g00920.t01 Wine grape endoplasmic reticulum, golgi 42.37 31.39
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane 35.7 30.47
AT1G70750.1 Thale cress endoplasmic reticulum, golgi, mitochondrion 32.3 29.11
EER95149 Sorghum mitochondrion 35.85 27.78
TraesCS4B01G217800.2 Wheat mitochondrion 33.93 27.1
TraesCS4D01G218100.3 Wheat mitochondrion 33.78 27.05
AT1G18990.1 Thale cress endoplasmic reticulum, plasma membrane 20.89 26.91
Zm00001d047881_P002 Maize mitochondrion 34.67 26.87
Os03t0259900-01 Rice mitochondrion 35.56 26.67
TraesCS4A01G086600.5 Wheat mitochondrion 33.93 26.47
GSMUA_Achr6P07650_001 Banana golgi, plasma membrane 36.3 26.06
AT1G74830.1 Thale cress extracellular, golgi, vacuole 20.74 25.83
GSMUA_Achr6P17030_001 Banana endoplasmic reticulum, golgi 34.96 25.82
KRH17362 Soybean endoplasmic reticulum, golgi, vacuole 41.48 25.78
KRH72995 Soybean endoplasmic reticulum, golgi 40.74 25.77
Zm00001d013452_P002 Maize endoplasmic reticulum, plasma membrane, plastid, vacuole 30.67 25.65
HORVU4Hr1G061850.1 Barley plastid 34.22 24.79
TraesCS4A01G270100.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane, plastid 31.7 23.88
HORVU4Hr1G007120.2 Barley endoplasmic reticulum, mitochondrion, plasma membrane, plastid 31.7 23.78
TraesCS4B01G044000.1 Wheat plastid 31.7 23.78
TraesCS4D01G041500.1 Wheat endoplasmic reticulum, plasma membrane, plastid 31.41 23.56
OQU91120 Sorghum endoplasmic reticulum, plastid 32.44 20.98
HORVU0Hr1G033330.3 Barley cytosol 25.04 19.95
Zm00001d033705_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 29.63 19.72
AT4G13160.1 Thale cress endoplasmic reticulum 8.15 19.5
AT5G06560.1 Thale cress nucleus 13.63 17.76
AT2G30690.2 Thale cress endoplasmic reticulum, plasma membrane, plastid 19.11 16.97
AT3G11850.2 Thale cress nucleus 12.59 16.87
AT3G54740.3 Thale cress cytosol, nucleus, peroxisome 10.81 16.67
AT4G30830.1 Thale cress nucleus 8.59 15.98
AT2G24140.2 Thale cress nucleus 7.11 14.81
AT5G57830.1 Thale cress nucleus 8.44 14.73
AT1G04890.1 Thale cress mitochondrion 8.89 14.6
AT1G08800.1 Thale cress extracellular, vacuole 23.41 14.2
AT4G13630.1 Thale cress extracellular, golgi 11.7 13.88
Protein Annotations
MapMan:20.2.4.3EntrezGene:831534UniProt:A0A178UCL7ProteinID:AED92330.1EMBL:AK229322ArrayExpress:AT5G16720
EnsemblPlantsGene:AT5G16720RefSeq:AT5G16720TAIR:AT5G16720RefSeq:AT5G16720-TAIR-GEnsemblPlants:AT5G16720.1TAIR:AT5G16720.1
Unigene:At.31644ProteinID:CAC01836.1ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0017022InterPro:GTD-bdInterPro:IPR007656
RefSeq:NP_197174.2ProteinID:OAO91596.1PFAM:PF04576PO:PO:0000005PO:PO:0000013PO:PO:0000037
PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007103PO:PO:0007115PO:PO:0007611
PO:PO:0007616PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009052PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PFscan:PS51775PANTHER:PTHR31448
PANTHER:PTHR31448:SF24UniProt:Q0WNW4TMHMM:TMhelixUniParc:UPI0000196D82SEG:seg:
Description
MYOB3Myosin-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q0WNW4]
Coordinates
chr5:+:5494228..5496846
Molecular Weight (calculated)
77025.5 Da
IEP (calculated)
4.141
GRAVY (calculated)
-0.721
Length
675 amino acids
Sequence
(BLAST)
001: MAANNFATKL SRNTNRITVI LVYAFLEWLL MFFIFLNSFF TYFIVKFASF FGLKQVCLLC PKLDRIFERK PENRFTYKEL LCQNHIAELA SLSFCRTHGK
101: LSESANLCSD CSNREEEQSN IGLGFCTCCQ KSLADKPYPN YLLLKSSIWG KTLGDREDGG LILEMIDDDK FGDGFEIDRE SYPLGFFRDK AEEGKKQDQQ
201: QNGEVISDVE SYGLSLREVS EEDGLRSIIS NNSPGNEAKS RVSEDEQRND DTSNVATYGE DQISGRVEEK EEETGVADLL YDQFESKNFT GSQIEEEEED
301: REETTKELDP ETPTSVSTLF NKKLHFLARN EYAAAEDAGD GNVLVSEMDG GDPLRTIERL RETVRAEQEA LRDLYAELEE ERSASAISAN QTMAMITRLQ
401: EEKAKVQMEA LQYQRMMEEQ AEYDQEALQL LNHLMVKREK EKEQLQRELE VYRAKVLEYE SKAKNKIIVV ENDCEADDDD KEEENREEDN SSEMDVDLEK
501: ITLDCVQHMS MLGESLSEFE EERLVILDQL KVLEDRLVTM QDKESAEDPG EFSNSYEEAS NGHGGLTMAS MAKSLLPLLD AAENESEDGS QGLPESDEKN
601: FGSDSEKLEI IKQVDSVYER LQELETDGEF LKNCMSSAKK GDKGTDILKD ILQHLRDLRT IELTNTIENQ TTQEE
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.