Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28219 | Canola | cytosol | 61.43 | 75.85 |
| CDX68698 | Canola | cytosol | 59.78 | 73.81 |
| CDX72271 | Canola | nucleus | 73.83 | 69.43 |
| CDY13389 | Canola | nucleus | 73.83 | 66.67 |
| Bra011226.1-P | Field mustard | cytosol | 60.33 | 66.57 |
| AT2G24140.2 | Thale cress | nucleus | 49.86 | 55.86 |
| AT5G57830.1 | Thale cress | nucleus | 31.13 | 29.2 |
| KRH37764 | Soybean | nucleus | 34.16 | 27.07 |
| VIT_11s0037g00610.t01 | Wine grape | nucleus | 34.71 | 26.87 |
| KRH12784 | Soybean | nucleus | 32.78 | 26.1 |
| KRH55008 | Soybean | cytosol | 11.57 | 26.09 |
| KRH63109 | Soybean | nucleus | 31.41 | 24.73 |
| Solyc07g005910.2.1 | Tomato | nucleus | 30.3 | 24.28 |
| PGSC0003DMT400028965 | Potato | nucleus | 29.75 | 23.84 |
| KRH72337 | Soybean | nucleus | 30.58 | 23.67 |
| PGSC0003DMT400023950 | Potato | nucleus | 28.93 | 23.6 |
| KRH03013 | Soybean | nucleus | 29.75 | 22.78 |
| Solyc11g020850.1.1 | Tomato | nucleus | 29.2 | 20.19 |
| Os08t0442350-01 | Rice | nucleus | 25.9 | 18.88 |
| TraesCS7D01G282800.1 | Wheat | nucleus | 22.59 | 18.81 |
| Os08t0269000-01 | Rice | cytosol, golgi, nucleus | 14.88 | 18.62 |
| TraesCS7A01G285400.1 | Wheat | nucleus | 22.59 | 18.51 |
| TraesCS7B01G199800.1 | Wheat | nucleus | 22.59 | 18.51 |
| TraesCS5B01G405000.1 | Wheat | nucleus | 19.01 | 18.3 |
| TraesCS5A01G400200.1 | Wheat | nucleus | 19.01 | 18.21 |
| TraesCS5D01G410200.1 | Wheat | nucleus | 18.73 | 17.94 |
| OQU80548 | Sorghum | nucleus | 23.97 | 16.48 |
| Zm00001d024102_P002 | Maize | nucleus | 15.7 | 16.1 |
| HORVU5Hr1G097200.5 | Barley | cytosol | 18.73 | 15.89 |
| AT4G13160.1 | Thale cress | endoplasmic reticulum | 12.12 | 15.6 |
| GSMUA_Achr10P... | Banana | nucleus | 20.66 | 15.56 |
| AT3G54740.3 | Thale cress | cytosol, nucleus, peroxisome | 17.91 | 14.84 |
| Solyc12g009900.1.1 | Tomato | cytosol | 25.62 | 14.6 |
| OQU80230 | Sorghum | cytosol | 15.98 | 14.5 |
| AT5G06560.1 | Thale cress | nucleus | 19.83 | 13.9 |
| Zm00001d032145_P001 | Maize | nucleus | 22.31 | 13.09 |
| PGSC0003DMT400020469 | Potato | cytosol | 24.79 | 12.97 |
| AT1G04890.1 | Thale cress | mitochondrion | 13.5 | 11.92 |
| AT3G11850.2 | Thale cress | nucleus | 15.7 | 11.31 |
| AT1G74830.1 | Thale cress | extracellular, golgi, vacuole | 14.05 | 9.41 |
| AT4G13630.1 | Thale cress | extracellular, golgi | 14.6 | 9.31 |
| AT1G70750.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion | 18.18 | 8.81 |
| AT5G16720.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 15.98 | 8.59 |
| AT1G18990.1 | Thale cress | endoplasmic reticulum, plasma membrane | 12.4 | 8.59 |
| AT2G30690.2 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 12.12 | 5.79 |
| AT1G08800.1 | Thale cress | extracellular, vacuole | 13.77 | 4.49 |
Protein Annotations
| MapMan:35.1 | EntrezGene:829207 | ProteinID:AEE85816.1 | ProteinID:ANM67240.1 | ArrayExpress:AT4G30830 | EnsemblPlantsGene:AT4G30830 |
| RefSeq:AT4G30830 | TAIR:AT4G30830 | RefSeq:AT4G30830-TAIR-G | EnsemblPlants:AT4G30830.1 | TAIR:AT4G30830.1 | Unigene:At.31800 |
| ncoils:Coil | EMBL:DQ446887 | InterPro:GTD-bd | InterPro:IPR007656 | RefSeq:NP_001320094.1 | RefSeq:NP_567857.1 |
| PFAM:PF04576 | PO:PO:0000036 | PO:PO:0000039 | PO:PO:0000054 | PO:PO:0000230 | PO:PO:0000282 |
| PO:PO:0000293 | PO:PO:0003011 | PO:PO:0004707 | PO:PO:0004723 | PO:PO:0005003 | PO:PO:0005028 |
| PO:PO:0005660 | PO:PO:0006504 | PO:PO:0007611 | PO:PO:0009005 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0020090 | PO:PO:0020100 | PO:PO:0020139 | PFscan:PS51775 | PANTHER:PTHR31422 |
| PANTHER:PTHR31422:SF1 | UniProt:Q1PE31 | UniParc:UPI0000162B53 | SEG:seg | : | : |
Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q1PE31]
Coordinates
chr4:-:15015236..15017365
Molecular Weight (calculated)
42167.6 Da
IEP (calculated)
4.568
GRAVY (calculated)
-0.885
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MVERSRSFRI PGAETNDLRI ALYERKEVIE RLQEELNAER EASETSANEA MSMILRLQGE KAELAMEADQ YKRMVEEQMS HAEMSFALLE DVIYQKEIEV
101: TALAYQVEVY RSQLLSLGFN DLKSLDVKLQ EDDDQDENML KMNDFSLSDR SQTPSPELVT DLSIPEEKEV IEQSLESQKS SLDVYWEQIK KLNEQVKELT
201: GFRDSMRDQH RTSVSESRGE EDFASSSNFQ EVTQERKKEA KGLSKTTDDT MMIKVSKQTK MEKKPSKQTR DRSGKRNRAE YQAELQRLRQ RVERLERGKS
301: NTEPETSGVI KQEEISLLKE VKEELSSVQS SDVKKSLNTM ENLQPWVDPT IISVQEAMLY FWL
101: TALAYQVEVY RSQLLSLGFN DLKSLDVKLQ EDDDQDENML KMNDFSLSDR SQTPSPELVT DLSIPEEKEV IEQSLESQKS SLDVYWEQIK KLNEQVKELT
201: GFRDSMRDQH RTSVSESRGE EDFASSSNFQ EVTQERKKEA KGLSKTTDDT MMIKVSKQTK MEKKPSKQTR DRSGKRNRAE YQAELQRLRQ RVERLERGKS
301: NTEPETSGVI KQEEISLLKE VKEELSSVQS SDVKKSLNTM ENLQPWVDPT IISVQEAMLY FWL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.