Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g005910.2.1 | Tomato | nucleus | 95.81 | 95.81 |
| PGSC0003DMT400023950 | Potato | nucleus | 85.87 | 87.42 |
| CDX88641 | Canola | nucleus | 12.14 | 45.08 |
| VIT_11s0037g00610.t01 | Wine grape | nucleus | 46.36 | 44.78 |
| Bra006798.1-P | Field mustard | nucleus | 28.04 | 41.5 |
| CDY50792 | Canola | nucleus | 32.45 | 39.95 |
| CDY51277 | Canola | nucleus | 32.01 | 39.4 |
| CDY32744 | Canola | nucleus | 31.79 | 39.34 |
| AT5G57830.1 | Thale cress | nucleus | 33.55 | 39.28 |
| Bra002693.1-P | Field mustard | nucleus | 31.79 | 39.13 |
| Bra020409.1-P | Field mustard | nucleus | 27.37 | 38.99 |
| Bra006800.1-P | Field mustard | cytosol | 13.91 | 38.89 |
| CDY02772 | Canola | nucleus | 31.35 | 38.8 |
| Bra002694.1-P | Field mustard | nucleus | 30.68 | 37.77 |
| KRH63109 | Soybean | nucleus | 37.75 | 37.09 |
| CDY11846 | Canola | nucleus | 19.43 | 36.97 |
| CDX88643 | Canola | nucleus | 19.21 | 36.55 |
| KRH72337 | Soybean | nucleus | 37.75 | 36.46 |
| KRH37764 | Soybean | nucleus | 36.42 | 36.03 |
| KRH12784 | Soybean | nucleus | 35.98 | 35.75 |
| KRH03013 | Soybean | nucleus | 37.31 | 35.65 |
| KRH55008 | Soybean | cytosol | 12.36 | 34.78 |
| CDY28219 | Canola | cytosol | 21.85 | 33.67 |
| CDX68698 | Canola | cytosol | 21.41 | 32.99 |
| CDX76832 | Canola | nucleus | 21.85 | 30.75 |
| CDY34794 | Canola | nucleus | 22.08 | 30.67 |
| Bra039233.1-P | Field mustard | nucleus | 21.63 | 30.06 |
| CDX72271 | Canola | nucleus | 25.39 | 29.79 |
| Bra011226.1-P | Field mustard | cytosol | 21.63 | 29.79 |
| AT4G30830.1 | Thale cress | nucleus | 23.84 | 29.75 |
| AT2G24140.2 | Thale cress | nucleus | 20.53 | 28.7 |
| CDY13389 | Canola | nucleus | 24.06 | 27.11 |
| Os08t0269000-01 | Rice | cytosol, golgi, nucleus | 15.01 | 23.45 |
| TraesCS5D01G410200.1 | Wheat | nucleus | 18.98 | 22.69 |
| TraesCS5A01G400200.1 | Wheat | nucleus | 18.98 | 22.69 |
| GSMUA_Achr10P... | Banana | nucleus | 23.84 | 22.41 |
| TraesCS5B01G405000.1 | Wheat | nucleus | 18.54 | 22.28 |
| TraesCS7D01G282800.1 | Wheat | nucleus | 19.65 | 20.41 |
| HORVU5Hr1G097200.5 | Barley | cytosol | 18.98 | 20.09 |
| TraesCS7B01G199800.1 | Wheat | nucleus | 19.65 | 20.09 |
| TraesCS7A01G285400.1 | Wheat | nucleus | 19.65 | 20.09 |
| Zm00001d024102_P002 | Maize | nucleus | 15.67 | 20.06 |
| OQU80230 | Sorghum | cytosol | 17.66 | 20.0 |
| Os08t0442350-01 | Rice | nucleus | 21.63 | 19.68 |
| PGSC0003DMT400072288 | Potato | plastid | 21.63 | 18.99 |
| PGSC0003DMT400022326 | Potato | nucleus | 20.75 | 18.95 |
| OQU80548 | Sorghum | nucleus | 20.53 | 17.61 |
| PGSC0003DMT400020469 | Potato | cytosol | 24.94 | 16.28 |
| Zm00001d032145_P001 | Maize | nucleus | 20.75 | 15.19 |
| PGSC0003DMT400011603 | Potato | nucleus | 16.56 | 14.71 |
| PGSC0003DMT400030876 | Potato | endoplasmic reticulum, extracellular | 13.47 | 11.78 |
| PGSC0003DMT400062848 | Potato | golgi | 14.35 | 10.85 |
| PGSC0003DMT400083120 | Potato | endoplasmic reticulum | 13.91 | 10.54 |
| PGSC0003DMT400075922 | Potato | endoplasmic reticulum, golgi | 15.89 | 8.39 |
| PGSC0003DMT400070777 | Potato | golgi, plasma membrane, plastid | 14.57 | 7.67 |
| CDY31127 | Canola | cytosol | 9.93 | 6.92 |
| PGSC0003DMT400080686 | Potato | endoplasmic reticulum, golgi, plastid | 13.69 | 5.39 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 0.22 | 0.51 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400028965 | EnsemblPlantsGene:PGSC0003DMG400011151 | EntrezGene:102602908 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil |
| PANTHER:PTHR31422 | PANTHER:PTHR31422:SF1 | PFAM:PF04576 | PFscan:PS51775 | PGSC:PGSC0003DMG400011151 | RefSeq:XP_006343609.1 |
| SEG:seg | UniParc:UPI0002969901 | UniProt:M1AS00 | MapMan:35.1 | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400011151]
Coordinates
chr7:+:1212560..1214955
Molecular Weight (calculated)
51194.0 Da
IEP (calculated)
4.669
GRAVY (calculated)
-0.742
Length
453 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSYMSQLD VASLKDTLCA QQQLLQKLYS ELDEEREASS SAASEALSMI LRLQGEKAAV KMEAEQYKRL AEEKMCHAEE SLAIFEDLFY GKEMEIAALE
101: YQVQAYRYKL LSMGCVDPGV GEFKYPENLL QRNENLAGEM NLQALGRRNS PPPFPLKIPK RGAMEIDDSS SEIDSNSKTV EEYTGQEMNE QQSDTERKTD
201: ISISTTGSIN SYWQQIRKLD DRVKDITGVS YANLRSETRS PSPLSQRSIK ISKSENEMYQ PPKLHVSKSE NDSPADSGCS PNVLDVFEVP RADKDTIDSG
301: LPPKHDRKMV SHNDERLERP DSSQQEAVKS SVRDEADVLK KYFVSAQQEN KLRRASEAAA ITCHLAISRP TTSISEISES HQPNRTSEIV EVGREASRYE
401: MAREEELKLL HDIKEQLNLM HSEIQSLKSD KLPPSDDEPS LLLLSEAMVH FWL
101: YQVQAYRYKL LSMGCVDPGV GEFKYPENLL QRNENLAGEM NLQALGRRNS PPPFPLKIPK RGAMEIDDSS SEIDSNSKTV EEYTGQEMNE QQSDTERKTD
201: ISISTTGSIN SYWQQIRKLD DRVKDITGVS YANLRSETRS PSPLSQRSIK ISKSENEMYQ PPKLHVSKSE NDSPADSGCS PNVLDVFEVP RADKDTIDSG
301: LPPKHDRKMV SHNDERLERP DSSQQEAVKS SVRDEADVLK KYFVSAQQEN KLRRASEAAA ITCHLAISRP TTSISEISES HQPNRTSEIV EVGREASRYE
401: MAREEELKLL HDIKEQLNLM HSEIQSLKSD KLPPSDDEPS LLLLSEAMVH FWL
001: MVERTMSLGV GGNGETSGVR ETMWAQQELL QKINQELDAE REASSSAASE ALSMILRLQG EKAALEMEAS QYKRMAEEKM CHAETSLVLF EDLIYQKEME
101: IASLEFQVQA YRCKLLSLGC SDPAVIENKF PETLIFSGEN SRGNQKRKMK RNLSSPFDGI SSERSLLLSD VNGESFEEKK GLVESSSVSP REDLNAYWEQ
201: IRRIDEHVRE ISDSRDTQKA SKFPLIRRES ISHALVSQVS NTILESAKSD VSSIMEMMKN PERFSVKDAS LETPILSPKN VQDIFEVPRT KESLTIISEE
301: EEAEERNVRG KMVTSNYDRK VSKPPRDTSI KGEHLSLLKE IREQLNVMQS EMRSLRSELH HQSKPVSNPE EDLVLNSIQE AMIHFWL
101: IASLEFQVQA YRCKLLSLGC SDPAVIENKF PETLIFSGEN SRGNQKRKMK RNLSSPFDGI SSERSLLLSD VNGESFEEKK GLVESSSVSP REDLNAYWEQ
201: IRRIDEHVRE ISDSRDTQKA SKFPLIRRES ISHALVSQVS NTILESAKSD VSSIMEMMKN PERFSVKDAS LETPILSPKN VQDIFEVPRT KESLTIISEE
301: EEAEERNVRG KMVTSNYDRK VSKPPRDTSI KGEHLSLLKE IREQLNVMQS EMRSLRSELH HQSKPVSNPE EDLVLNSIQE AMIHFWL
Arabidopsis Description
Protein of unknown function, DUF593 [Source:TAIR;Acc:AT5G57830]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.