Factsheet for PGSC0003DMT400030876

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

nucleus 2
mitochondrion 1
extracellular 4
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g027730.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	93.82	93.64
PGSC0003DMT400062848	Potato	golgi	67.76	58.6
PGSC0003DMT400083120	Potato	endoplasmic reticulum	64.86	56.19
Bra003783.1-P	Field mustard	extracellular, plasma membrane	42.66	46.62
AT1G18990.1	Thale cress	endoplasmic reticulum, plasma membrane	46.72	46.18
CDY26705	Canola	endoplasmic reticulum, plasma membrane, plastid	45.75	45.75
CDY19266	Canola	endoplasmic reticulum, nucleus, plasma membrane	45.75	45.49
Bra025705.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	45.37	45.37
Bra031059.1-P	Field mustard	endoplasmic reticulum, vacuole	44.59	45.21
CDY21687	Canola	endoplasmic reticulum, vacuole	44.59	45.21
CDX81908	Canola	endoplasmic reticulum, vacuole	43.24	44.89
AT1G74830.1	Thale cress	extracellular, golgi, vacuole	46.72	44.65
CDX85859	Canola	extracellular, plasma membrane, vacuole	42.47	44.62
Bra015891.1-P	Field mustard	endoplasmic reticulum, golgi	46.53	44.38
CDY45396	Canola	extracellular, golgi, vacuole	46.14	44.1
CDX68162	Canola	extracellular, plasma membrane, vacuole	41.51	43.61
KRH63445	Soybean	endoplasmic reticulum	51.35	43.25
CDX73116	Canola	extracellular, golgi, vacuole	45.95	43.19
KRH54475	Soybean	endoplasmic reticulum	50.19	43.19
VIT_17s0000g05320.t01	Wine grape	endoplasmic reticulum, golgi	50.77	42.35
PGSC0003DMT400075922	Potato	endoplasmic reticulum, golgi	33.98	20.51
PGSC0003DMT400070777	Potato	golgi, plasma membrane, plastid	32.82	19.74
PGSC0003DMT400022326	Potato	nucleus	13.9	14.52
PGSC0003DMT400072288	Potato	plastid	14.09	14.15
PGSC0003DMT400023950	Potato	nucleus	11.78	13.71
PGSC0003DMT400028965	Potato	nucleus	11.78	13.47
PGSC0003DMT400080686	Potato	endoplasmic reticulum, golgi, plastid	28.38	12.77
PGSC0003DMT400011603	Potato	nucleus	11.97	12.16
PGSC0003DMT400020469	Potato	cytosol	10.42	7.78

Protein Annotations

EntrezGene:102605908	MapMan:20.2.4.3	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0017022	InterPro:GTD-bd	InterPro:IPR007656
UniProt:M1AUX3	PFAM:PF04576	EnsemblPlantsGene:PGSC0003DMG400011830	PGSC:PGSC0003DMG400011830	EnsemblPlants:PGSC0003DMT400030876	PFscan:PS51775
PANTHER:PTHR31448	PANTHER:PTHR31448:SF9	TMHMM:TMhelix	UniParc:UPI000295350B	RefSeq:XP_006339978.1	SEG:seg

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400011830]

Coordinates

chr12:+:16315093..16317509

Molecular Weight (calculated)

59833.2 Da

IEP (calculated)

5.121

GRAVY (calculated)

-0.432

Length

518 amino acids

Sequence
(BLAST)

001: MAFKCCVEQK MGKFAFFFIY ALLEWVMILL LFIEGFLAFF SNEFAKLFDL KIPCLLCTRI DHILVHRDAN FYYNDSICEV HKKDISSLAY CHVHRKLSDI
101: KNMCEGCLLS FATEKDADCD RYKSLVGILH KDIDCFVEDA LHMKKEDHEV MLQTTTSFVR CSCCGEHLKI RSKSTPSSQA PWRNEDYTQL KFIFVNDLDD
201: GAGREDNIKG ANSEEINDDS LKTANFTRNK FFGIPLSDSC QASPRWSHRP RKLSMELISE SNDVVNESDN DILHRLKRQV HLDHKSVIAL YMELDEERSA
301: AAVAANNAMA MITRLQAEKA AVQMEALQYQ RMMEEQAEYD QEALQVMKDL LLKREEDIKV MEVVVETYRE RYGDTKRVGS EVCDVDEEWN SHSFSSLSER
401: STCVSPDEGD QHRLGTFEYD FEHERCYLMG LLAKLEDKIT TSKDEGFYES EGKGYCENKV TLRREVSVIR ERLSAIEAES MFLKHATMTL QRDDEGIKLL
501: TEIAQHLRML RQSKDGSA

Best Arabidopsis Sequence Match ( AT1G74830.1 )
(BLAST)

001: MYIQLLCFFL FLFLLLQATM SKRSFKKFVE QELGSLPHFL IYTVLEWSLI VFLFIDGVIA FLSNQFAKFF DLNIPCLLCT RIDHILVPRD PQFYYNESIC
101: DSHKKKVSSL AYCHVHKKLS EIKHMCEGCL LSFATEKDSD CDTYKSLIGI LHKDLELLID DERDLPLAFK KDDNLVQTTK NLVDYKTNNI KNDSLKQHCS
201: CCGELLKIKS EKLPKNNNSF LAPAPSPRVS HNKLSENESE FKDMDVDRTP SFVRGGNKFF GIPLSDSAQN SPRWSVRSLK KSVLNKTENA SDTTDPTGES
301: ILNQLKKEVR LDKKSLIDLY MELDEERSAS AVAANEAMAM ITRLQAEKAA VQMEALQYQR MMDEQAEYDQ EALQSMSSEL AKREEEMKEL EAEFEVYREK
401: YGCLTDQEDA REEFHKQNGN ASAYDDCQET KPVSDLAVSS SNQQENGENI DQNGQSKRSE ESTAENVVSA DEEKGSESKE GIVKELSEIT ERLSTLQSNG
501: DLLKHIADVL DVSEGEAILL QISQNLHMLR SFVAMPSESM NL

Arabidopsis Description

MYOB6Probable myosin-binding protein 6 [Source:UniProtKB/Swiss-Prot;Acc:F4HVS6]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.