Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025705.1-P | Field mustard | endoplasmic reticulum, plasma membrane, plastid | 99.61 | 99.61 |
| CDY19266 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 97.68 | 97.12 |
| AT1G18990.1 | Thale cress | endoplasmic reticulum, plasma membrane | 84.75 | 83.78 |
| CDY21687 | Canola | endoplasmic reticulum, vacuole | 81.08 | 82.19 |
| CDX81908 | Canola | endoplasmic reticulum, vacuole | 78.19 | 81.16 |
| CDX85859 | Canola | extracellular, plasma membrane, vacuole | 59.07 | 62.07 |
| CDY45396 | Canola | extracellular, golgi, vacuole | 64.48 | 61.62 |
| CDX68162 | Canola | extracellular, plasma membrane, vacuole | 58.49 | 61.46 |
| CDX73116 | Canola | extracellular, golgi, vacuole | 63.51 | 59.71 |
| PGSC0003DMT400030876 | Potato | endoplasmic reticulum, extracellular | 45.75 | 45.75 |
| Solyc12g027730.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 45.17 | 45.09 |
| KRH54475 | Soybean | endoplasmic reticulum | 51.35 | 44.19 |
| KRH63445 | Soybean | endoplasmic reticulum | 51.54 | 43.41 |
| PGSC0003DMT400062848 | Potato | golgi | 47.1 | 40.73 |
| Solyc03g113600.2.1 | Tomato | golgi | 46.53 | 40.3 |
| PGSC0003DMT400083120 | Potato | endoplasmic reticulum | 46.53 | 40.3 |
| VIT_17s0000g05320.t01 | Wine grape | endoplasmic reticulum, golgi | 46.91 | 39.13 |
| Solyc06g071190.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 47.49 | 38.5 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 11.0 | 28.79 |
| CDY09477 | Canola | nucleus | 8.88 | 24.73 |
| CDY47332 | Canola | extracellular, plasma membrane | 11.78 | 23.37 |
| CDY01114 | Canola | extracellular, plasma membrane | 11.78 | 23.37 |
| CDX69426 | Canola | endoplasmic reticulum, golgi, plastid | 25.87 | 19.59 |
| CDY16985 | Canola | endoplasmic reticulum, golgi | 25.1 | 19.15 |
| CDY14078 | Canola | nucleus | 14.09 | 18.91 |
| CDX88641 | Canola | nucleus | 4.44 | 18.85 |
| CDX96274 | Canola | mitochondrion | 25.1 | 17.66 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 24.13 | 17.58 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 23.94 | 17.2 |
| CDY29652 | Canola | endoplasmic reticulum | 24.13 | 17.15 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 28.38 | 16.82 |
| CDY11550 | Canola | mitochondrion | 25.29 | 16.42 |
| CDY04993 | Canola | nucleus | 12.93 | 16.34 |
| CDX98935 | Canola | nucleus | 12.74 | 16.18 |
| CDX70091 | Canola | nucleus | 13.32 | 16.16 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 23.75 | 16.12 |
| CDY02887 | Canola | cytosol, nucleus, peroxisome | 11.58 | 15.83 |
| CDY08489 | Canola | nucleus | 11.78 | 15.76 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 28.76 | 15.57 |
| CDX78259 | Canola | nucleus | 12.16 | 15.52 |
| CDX93536 | Canola | extracellular, vacuole | 28.76 | 15.46 |
| CDY70407 | Canola | peroxisome | 11.0 | 15.45 |
| CDX73453 | Canola | nucleus | 11.97 | 14.98 |
| CDX67607 | Canola | peroxisome | 11.97 | 14.76 |
| CDX76130 | Canola | cytosol | 11.0 | 14.32 |
| CDY01064 | Canola | nucleus | 12.16 | 14.13 |
| CDY18267 | Canola | endoplasmic reticulum, plasma membrane | 14.09 | 14.01 |
| CDX76832 | Canola | nucleus | 8.69 | 13.98 |
| CDY34794 | Canola | nucleus | 8.69 | 13.8 |
| CDY31127 | Canola | cytosol | 17.18 | 13.69 |
| CDY67532 | Canola | nucleus | 11.0 | 13.67 |
| CDY50792 | Canola | nucleus | 9.65 | 13.59 |
| CDY51277 | Canola | nucleus | 9.65 | 13.59 |
| CDY07526 | Canola | nucleus | 7.53 | 13.54 |
| CDX88643 | Canola | nucleus | 6.18 | 13.45 |
| CDX89779 | Canola | endoplasmic reticulum, extracellular | 13.51 | 13.44 |
| CDY13389 | Canola | nucleus | 10.42 | 13.43 |
| CDY28219 | Canola | cytosol | 7.53 | 13.27 |
| CDX68698 | Canola | cytosol | 7.53 | 13.27 |
| CDY02772 | Canola | nucleus | 9.27 | 13.11 |
| CDY32744 | Canola | nucleus | 9.27 | 13.11 |
| CDY11846 | Canola | nucleus | 5.98 | 13.03 |
| CDX72271 | Canola | nucleus | 9.27 | 12.44 |
| CDY01147 | Canola | extracellular, golgi, vacuole | 12.74 | 11.93 |
| CDY68842 | Canola | vacuole | 12.55 | 11.55 |
| CDY07525 | Canola | peroxisome | 1.35 | 7.29 |
Protein Annotations
| MapMan:20.2.4.3 | GO:A0A078GJJ4 | UniProt:A0A078GJJ4 | EnsemblPlants:CDY26705 | ProteinID:CDY26705 | ProteinID:CDY26705.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0017022 | EnsemblPlantsGene:GSBRNA2T00035606001 | InterPro:GTD-bd | InterPro:IPR007656 | PFAM:PF04576 |
| PFscan:PS51775 | PANTHER:PTHR31448 | PANTHER:PTHR31448:SF9 | TMHMM:TMhelix | UniParc:UPI0004EEAFA0 | SEG:seg |
Description
BnaA06g13170DBnaA06g13170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GJJ4]
Coordinates
chrLK032193:+:235718..237456
Molecular Weight (calculated)
59323.1 Da
IEP (calculated)
4.593
GRAVY (calculated)
-0.544
Length
518 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNRSFKNFI EEELGTFPHF FIYAILEWII IILLFIDGLL AFFSNQFARF FNLRTPCLLC TRLDHVLVKT NPDFYYNDSI CDSHKRNISS LAYCHVHKKL
101: SEIKHMCEGC LLSFATEKES DVDTYKSLIG ILHKDLELLI DERELQLAFP VAGSKKDENF HRTNNRFQQQ QHCSCCGELL KIKTEKPKNN NNQSFFAGPS
201: PSPRVSFNQR TLDLSQIKYS ELPEEEDTKG ALGDTVDDRT PSFVKGGNNN RFFGLPLSDS ALNSPRWSVR SMKKSLIDQN GAESEVLDGD SILHHLKRQV
301: RLDRKSLMDL YMELDEERSA SAVAANNAMA MITRLQAEKA AVQMEALQYQ RMMDEQAEYD QEALQSMNGL LVKREEDMKE LEAEIEAYRL RYGLLREEED
401: GQGREPEEFL DETKPVLDLP VCSSNGEEDL EHKQDSAEEP KANNDGIIEE EREDGSRKAV LVKEITEITE RLSAIESKGE LLQQISDVLD VSEGEAILYQ
501: ISQNLHMLRS FIEMPSES
101: SEIKHMCEGC LLSFATEKES DVDTYKSLIG ILHKDLELLI DERELQLAFP VAGSKKDENF HRTNNRFQQQ QHCSCCGELL KIKTEKPKNN NNQSFFAGPS
201: PSPRVSFNQR TLDLSQIKYS ELPEEEDTKG ALGDTVDDRT PSFVKGGNNN RFFGLPLSDS ALNSPRWSVR SMKKSLIDQN GAESEVLDGD SILHHLKRQV
301: RLDRKSLMDL YMELDEERSA SAVAANNAMA MITRLQAEKA AVQMEALQYQ RMMDEQAEYD QEALQSMNGL LVKREEDMKE LEAEIEAYRL RYGLLREEED
401: GQGREPEEFL DETKPVLDLP VCSSNGEEDL EHKQDSAEEP KANNDGIIEE EREDGSRKAV LVKEITEITE RLSAIESKGE LLQQISDVLD VSEGEAILYQ
501: ISQNLHMLRS FIEMPSES
001: MSNRSFKNFI EEELGTFPQF LIYALLEWIL IIILFIDGFL AFFSNQIAKF FDLKIPCLLC TRLDHVLVSR NPDFYYNDSI CDAHKKNVSS LAYCHVHKKL
101: SEIKRMCEGC LLSFATEKET DVDTYKSLIG ILHKDLELLI DDERELQLAF PVAGSKKDEN FYQVENRTNN SNDRFQRQQR CSCCGQIMKL KSDKPKSNNQ
201: SFFGAPSPSP RVSFNQRTLD LSNIKYTDLP EDDDALNTKG ASLDAVDDRT PSFVKGGNKF FGIPLSDSAQ NSPRWSVRSM KKSFVDQNGL ESEVLDGDSI
301: LQHLNRQVRL DRKSLMDLYM ELDEERSASA VAANNAMAMI TRLQAEKAAV QMEALQYQRM MDEQAEYDQE ALQSMNGLLV KREEEMKELE AGIEVYRLRY
401: GLLREERGEA EEFLDEETKP VSDLPVCSSN HEEDLEQMKD SAEDSIGNNG VMIIEEEKEN GSRKDMLVKE ISEITERLNA IESKGELLQQ ISDVLDVSEG
501: EAILLQISQN LHMLRSFIEM PTES
101: SEIKRMCEGC LLSFATEKET DVDTYKSLIG ILHKDLELLI DDERELQLAF PVAGSKKDEN FYQVENRTNN SNDRFQRQQR CSCCGQIMKL KSDKPKSNNQ
201: SFFGAPSPSP RVSFNQRTLD LSNIKYTDLP EDDDALNTKG ASLDAVDDRT PSFVKGGNKF FGIPLSDSAQ NSPRWSVRSM KKSFVDQNGL ESEVLDGDSI
301: LQHLNRQVRL DRKSLMDLYM ELDEERSASA VAANNAMAMI TRLQAEKAAV QMEALQYQRM MDEQAEYDQE ALQSMNGLLV KREEEMKELE AGIEVYRLRY
401: GLLREERGEA EEFLDEETKP VSDLPVCSSN HEEDLEQMKD SAEDSIGNNG VMIIEEEKEN GSRKDMLVKE ISEITERLNA IESKGELLQQ ISDVLDVSEG
501: EAILLQISQN LHMLRSFIEM PTES
Arabidopsis Description
MYOB5Probable myosin-binding protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMC8]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.