Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034805.1-P | Field mustard | nucleus | 97.16 | 84.12 |
| CDY01064 | Canola | nucleus | 94.57 | 82.06 |
| CDY67532 | Canola | nucleus | 73.64 | 68.35 |
| CDY07525 | Canola | peroxisome | 14.21 | 57.29 |
| CDY14078 | Canola | nucleus | 54.78 | 54.92 |
| AT3G11850.2 | Thale cress | nucleus | 71.32 | 54.76 |
| CDX98935 | Canola | nucleus | 56.59 | 53.68 |
| CDX70091 | Canola | nucleus | 59.17 | 53.63 |
| CDY04993 | Canola | nucleus | 56.33 | 53.17 |
| VIT_08s0032g00720.t01 | Wine grape | plastid | 57.36 | 42.69 |
| KRH68055 | Soybean | cytosol | 50.13 | 41.45 |
| CDX76130 | Canola | cytosol | 42.38 | 41.21 |
| CDX78259 | Canola | nucleus | 42.89 | 40.89 |
| CDX73453 | Canola | nucleus | 43.41 | 40.58 |
| CDY02887 | Canola | cytosol, nucleus, peroxisome | 39.02 | 39.84 |
| CDY70407 | Canola | peroxisome | 36.69 | 38.48 |
| CDX67607 | Canola | peroxisome | 41.6 | 38.33 |
| KRG96316 | Soybean | cytosol | 46.51 | 31.03 |
| CDY07526 | Canola | nucleus | 21.45 | 28.82 |
| CDY47332 | Canola | extracellular, plasma membrane | 13.18 | 19.54 |
| CDY01114 | Canola | extracellular, plasma membrane | 12.92 | 19.16 |
| CDY50792 | Canola | nucleus | 17.31 | 18.21 |
| CDY34794 | Canola | nucleus | 15.25 | 18.1 |
| CDX68698 | Canola | cytosol | 13.7 | 18.03 |
| CDX76832 | Canola | nucleus | 14.99 | 18.01 |
| CDY51277 | Canola | nucleus | 17.05 | 17.93 |
| CDY02772 | Canola | nucleus | 16.54 | 17.49 |
| CDY32744 | Canola | nucleus | 16.54 | 17.49 |
| CDY28219 | Canola | cytosol | 12.92 | 17.01 |
| CDX88641 | Canola | nucleus | 5.17 | 16.39 |
| CDY09477 | Canola | nucleus | 7.75 | 16.13 |
| CDX88643 | Canola | nucleus | 9.56 | 15.55 |
| CDX72271 | Canola | nucleus | 14.99 | 15.03 |
| CDY11846 | Canola | nucleus | 8.79 | 14.29 |
| CDY13389 | Canola | nucleus | 14.47 | 13.93 |
| CDX89779 | Canola | endoplasmic reticulum, extracellular | 17.57 | 13.05 |
| CDY18267 | Canola | endoplasmic reticulum, plasma membrane | 17.31 | 12.86 |
| CDY68842 | Canola | vacuole | 17.57 | 12.08 |
| CDY01147 | Canola | extracellular, golgi, vacuole | 17.05 | 11.93 |
| CDY26705 | Canola | endoplasmic reticulum, plasma membrane, plastid | 15.76 | 11.78 |
| CDY19266 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 15.76 | 11.71 |
| CDX85859 | Canola | extracellular, plasma membrane, vacuole | 14.21 | 11.16 |
| CDX68162 | Canola | extracellular, plasma membrane, vacuole | 14.21 | 11.16 |
| CDY21687 | Canola | endoplasmic reticulum, vacuole | 14.73 | 11.15 |
| CDX81908 | Canola | endoplasmic reticulum, vacuole | 13.95 | 10.82 |
| CDY16985 | Canola | endoplasmic reticulum, golgi | 18.86 | 10.75 |
| CDY45396 | Canola | extracellular, golgi, vacuole | 14.99 | 10.7 |
| CDX69426 | Canola | endoplasmic reticulum, golgi, plastid | 18.86 | 10.67 |
| CDX73116 | Canola | extracellular, golgi, vacuole | 14.73 | 10.34 |
| CDX96274 | Canola | mitochondrion | 19.12 | 10.05 |
| CDY11550 | Canola | mitochondrion | 19.12 | 9.27 |
| CDY31127 | Canola | cytosol | 13.18 | 7.85 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 12.14 | 6.61 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 12.14 | 6.52 |
| CDY29652 | Canola | endoplasmic reticulum | 11.89 | 6.31 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 13.95 | 6.18 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 11.63 | 5.9 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 13.95 | 5.64 |
| CDX93536 | Canola | extracellular, vacuole | 13.95 | 5.6 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 0.78 | 1.52 |
Protein Annotations
| EnsemblPlants:CDY08489 | EnsemblPlantsGene:GSBRNA2T00000259001 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil | PANTHER:PTHR31422 |
| PANTHER:PTHR31422:SF0 | PFAM:PF04576 | PFscan:PS51775 | ProteinID:CDY08489 | ProteinID:CDY08489.1 | UniParc:UPI0004EEDB5A |
| UniProt:A0A078F609 | MapMan:35.1 | : | : | : | : |
Description
BnaA05g27250DBnaA05g27250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F609]
Coordinates
chrLK031986:+:394871..397201
Molecular Weight (calculated)
44689.0 Da
IEP (calculated)
6.088
GRAVY (calculated)
-0.825
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MESPSTKDLI QCCDCGCHSS PRSFHRSVKR RHDELLDESN NPKVHIENEC ELLRETVTSQ QQSIQELYEE LEKERNAAAS AADESMNVMQ RLQNEKAELQ
101: MELRQYKLYV GEKMEHDLQE MVALEELVNQ REQTIMALTC EAQAYKHRMM SYGLTEGEAE GDKSGYNSSD GYDLTAYEYP PLKCNVVENH DPLGADVYSP
201: RPQRHFRRMS TKEVRTDAYN VNAKDDSSDI GDDRVYTIDS VTEQKLEAET SDGNVGFQRE QMDLGDPDIT KLYMRLQALE ADRESMKQAL VSMRTEKAQM
301: VLLKEIAQHL SKEVVPQRRL PLRKASTGGP LPFTPVFKWI SSFVSWRRKA RRSKYMYGMS ANNMGLQMLL EKVPRSRKWR CLRSTQV
101: MELRQYKLYV GEKMEHDLQE MVALEELVNQ REQTIMALTC EAQAYKHRMM SYGLTEGEAE GDKSGYNSSD GYDLTAYEYP PLKCNVVENH DPLGADVYSP
201: RPQRHFRRMS TKEVRTDAYN VNAKDDSSDI GDDRVYTIDS VTEQKLEAET SDGNVGFQRE QMDLGDPDIT KLYMRLQALE ADRESMKQAL VSMRTEKAQM
301: VLLKEIAQHL SKEVVPQRRL PLRKASTGGP LPFTPVFKWI SSFVSWRRKA RRSKYMYGMS ANNMGLQMLL EKVPRSRKWR CLRSTQV
001: MESPIKCCDC GCDCCSSSPG SWIRSVKKRR HDELQTEKRF SIPELDDLDM FSNPRVQIEN ECELLRETVS NQQQTIQDLY HELEQERIAS STAADETVKM
101: IQTLEREKAK IDLELKQLQR SVDETLNYEN QEIEALENMV YQRDQTIQAL TFETQAYKHR MMSFGLTEAE ADGERSLLSR NPSMIDFSSE YDCPTQDYPP
201: LKCNINENQD PLEADIYVAD DENYPPADSP HGRVHLKTLD RRLSQMETNP SFTQLNRGRD VSEKGMVGES PRRQRHFRRI SPTGSSSSHL GASKELRPDV
301: FVDSPRSQSY SSKKMEDVSY TENNNAKDDL SEIGDDMSDR VYTIDSVHHS SVAHSGGVAE QKIEDGASDG NVVFPREHTD LGDPDITKLY MRLQALEADR
401: ESMKHALLSM RTEKAQMVLL KEIAQHLSKE VVPQRRLPLR KASIAGPLTF TPVFKWITSF VSWKRKARRS KYMYGMSGNN IGLQMLLEKV PRSRKWRCLR
501: STQV
101: IQTLEREKAK IDLELKQLQR SVDETLNYEN QEIEALENMV YQRDQTIQAL TFETQAYKHR MMSFGLTEAE ADGERSLLSR NPSMIDFSSE YDCPTQDYPP
201: LKCNINENQD PLEADIYVAD DENYPPADSP HGRVHLKTLD RRLSQMETNP SFTQLNRGRD VSEKGMVGES PRRQRHFRRI SPTGSSSSHL GASKELRPDV
301: FVDSPRSQSY SSKKMEDVSY TENNNAKDDL SEIGDDMSDR VYTIDSVHHS SVAHSGGVAE QKIEDGASDG NVVFPREHTD LGDPDITKLY MRLQALEADR
401: ESMKHALLSM RTEKAQMVLL KEIAQHLSKE VVPQRRLPLR KASIAGPLTF TPVFKWITSF VSWKRKARRS KYMYGMSGNN IGLQMLLEKV PRSRKWRCLR
501: STQV
Arabidopsis Description
F26K24.14 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF14]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.