Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78259 | Canola | nucleus | 95.17 | 97.04 |
| Bra007093.1-P | Field mustard | nucleus | 94.93 | 96.8 |
| CDY07525 | Canola | peroxisome | 19.81 | 85.42 |
| AT3G54740.3 | Thale cress | cytosol, nucleus, peroxisome | 80.43 | 76.03 |
| CDY70407 | Canola | peroxisome | 64.98 | 72.9 |
| CDX67607 | Canola | peroxisome | 73.43 | 72.38 |
| CDX76130 | Canola | cytosol | 68.36 | 71.11 |
| CDY02887 | Canola | cytosol, nucleus, peroxisome | 64.01 | 69.92 |
| CDY07526 | Canola | nucleus | 47.83 | 68.75 |
| CDY14078 | Canola | nucleus | 40.58 | 43.52 |
| CDY08489 | Canola | nucleus | 40.58 | 43.41 |
| CDY04993 | Canola | nucleus | 41.06 | 41.46 |
| CDX98935 | Canola | nucleus | 38.89 | 39.46 |
| CDX70091 | Canola | nucleus | 40.34 | 39.11 |
| CDY01064 | Canola | nucleus | 41.55 | 38.56 |
| CDY67532 | Canola | nucleus | 36.23 | 35.97 |
| CDX88641 | Canola | nucleus | 6.28 | 21.31 |
| CDX68698 | Canola | cytosol | 14.73 | 20.75 |
| CDY47332 | Canola | extracellular, plasma membrane | 12.56 | 19.92 |
| CDY01114 | Canola | extracellular, plasma membrane | 12.56 | 19.92 |
| CDY28219 | Canola | cytosol | 13.53 | 19.05 |
| CDY34794 | Canola | nucleus | 14.98 | 19.02 |
| CDX76832 | Canola | nucleus | 14.73 | 18.94 |
| CDY09477 | Canola | nucleus | 8.21 | 18.28 |
| CDY32744 | Canola | nucleus | 15.94 | 18.03 |
| CDY02772 | Canola | nucleus | 15.94 | 18.03 |
| CDY50792 | Canola | nucleus | 15.94 | 17.93 |
| CDY51277 | Canola | nucleus | 15.22 | 17.12 |
| CDX72271 | Canola | nucleus | 15.94 | 17.1 |
| CDX88643 | Canola | nucleus | 9.42 | 16.39 |
| CDY11846 | Canola | nucleus | 8.94 | 15.55 |
| CDY13389 | Canola | nucleus | 14.98 | 15.42 |
| CDX89779 | Canola | endoplasmic reticulum, extracellular | 17.63 | 14.01 |
| CDY18267 | Canola | endoplasmic reticulum, plasma membrane | 17.15 | 13.63 |
| CDY01147 | Canola | extracellular, golgi, vacuole | 17.39 | 13.02 |
| CDY68842 | Canola | vacuole | 17.39 | 12.79 |
| CDX68162 | Canola | extracellular, plasma membrane, vacuole | 14.49 | 12.17 |
| CDX81908 | Canola | endoplasmic reticulum, vacuole | 14.49 | 12.02 |
| CDY26705 | Canola | endoplasmic reticulum, plasma membrane, plastid | 14.98 | 11.97 |
| CDX85859 | Canola | extracellular, plasma membrane, vacuole | 14.25 | 11.97 |
| CDY21687 | Canola | endoplasmic reticulum, vacuole | 14.73 | 11.94 |
| CDY19266 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 14.98 | 11.9 |
| CDY45396 | Canola | extracellular, golgi, vacuole | 14.73 | 11.25 |
| CDX73116 | Canola | extracellular, golgi, vacuole | 14.25 | 10.71 |
| CDX96274 | Canola | mitochondrion | 18.84 | 10.6 |
| CDY16985 | Canola | endoplasmic reticulum, golgi | 15.94 | 9.72 |
| CDX69426 | Canola | endoplasmic reticulum, golgi, plastid | 15.94 | 9.65 |
| CDY11550 | Canola | mitochondrion | 18.6 | 9.65 |
| CDY31127 | Canola | cytosol | 14.25 | 9.08 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 12.32 | 7.17 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 12.32 | 7.07 |
| CDY29652 | Canola | endoplasmic reticulum | 12.08 | 6.86 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 13.77 | 6.52 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 11.84 | 6.42 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 14.73 | 6.37 |
| CDX93536 | Canola | extracellular, vacuole | 14.73 | 6.33 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 0.48 | 1.01 |
Protein Annotations
| EnsemblPlants:CDX73453 | EnsemblPlantsGene:GSBRNA2T00108958001 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil | PANTHER:PTHR31422 |
| PANTHER:PTHR31422:SF0 | PFAM:PF04576 | PFscan:PS51775 | ProteinID:CDX73453 | ProteinID:CDX73453.1 | SEG:seg |
| UniParc:UPI0004EE549B | MapMan:35.1 | : | : | : | : |
Description
BnaC08g25500D
Coordinates
chrLK031799:-:489818..491755
Molecular Weight (calculated)
46923.6 Da
IEP (calculated)
5.431
GRAVY (calculated)
-0.558
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSELKFSSR DVVKRCDYSL EASSSSSSSE PLSRTVKRKL NDFLLRGSSS DSSSNAKSLV ENECAALLED LSSQRQTVKD LHLELEEERK AAASAANETM
101: SMILRLQREK AEIQMEARQF KAFAEEKMTH DQEKLLVLEE LLYEKELAIE ALTYEVEAYK DKLLSYGLTE GEIHDEILGF GRDSSTVGVD VYPCEYSVVD
201: DQSPRWPYYD PNSPLGTARE IKGTEFCADS PMSSSGDRVY TIDSIHVGVS EVKIVDEPSR LSKGKLSGDH WDSPRNHEEP VMMMMSQQGG NEPGIEKLYT
301: RLQALEADRE SLRQIIVSMR TDKAQLVLLK EYAQRLSKET VTTDRRNLVS KMPSFKGVSL VTAFKWMVSF VSWRRKAKRN KYVYDMSANN MGMLMILGEG
401: SRSRRWSCLT SSHV
101: SMILRLQREK AEIQMEARQF KAFAEEKMTH DQEKLLVLEE LLYEKELAIE ALTYEVEAYK DKLLSYGLTE GEIHDEILGF GRDSSTVGVD VYPCEYSVVD
201: DQSPRWPYYD PNSPLGTARE IKGTEFCADS PMSSSGDRVY TIDSIHVGVS EVKIVDEPSR LSKGKLSGDH WDSPRNHEEP VMMMMSQQGG NEPGIEKLYT
301: RLQALEADRE SLRQIIVSMR TDKAQLVLLK EYAQRLSKET VTTDRRNLVS KMPSFKGVSL VTAFKWMVSF VSWRRKAKRN KYVYDMSANN MGMLMILGEG
401: SRSRRWSCLT SSHV
001: MDSELSFSSR DVVNCCEYGC DYSLGACSSD PLARTVKRKF NEFKEGNNMM LLRGSSDSSS SNAKILVENE CAALLEALSS QRETVKDLHL ELEEERNAAA
101: SAANETMSMI LRLQREKAEI QMEARQFKMF AQEKMTHDQE KLSVLENLLY EKEQAIEALT YEVEAYKHRL LSYGVSEAEI HDQILGFGRD SSTVGFDVYP
201: CEYTSLECSV DENPSGPDGN FEIEEKVMVG QSPRWPYYDP NSPLGTAKDI KGASFADSPM SSSSDRVYTI DSIHVGVSEV KIDDEPNKMS KGKLNGDHWN
301: SPRYQEPFTT QQGVNEPDIE KLYTRLQALE ADRESLRQII VSMRTDKAQL VLLKEIAQHL TKETGATSRR NPVSKMPSLK VFSVVTVFKW IVSFVSWKRK
401: ARQNKYVYEL SANNMGMLMI LGEGSGTRRW RCLTSSHV
101: SAANETMSMI LRLQREKAEI QMEARQFKMF AQEKMTHDQE KLSVLENLLY EKEQAIEALT YEVEAYKHRL LSYGVSEAEI HDQILGFGRD SSTVGFDVYP
201: CEYTSLECSV DENPSGPDGN FEIEEKVMVG QSPRWPYYDP NSPLGTAKDI KGASFADSPM SSSSDRVYTI DSIHVGVSEV KIDDEPNKMS KGKLNGDHWN
301: SPRYQEPFTT QQGVNEPDIE KLYTRLQALE ADRESLRQII VSMRTDKAQL VLLKEIAQHL TKETGATSRR NPVSKMPSLK VFSVVTVFKW IVSFVSWKRK
401: ARQNKYVYEL SANNMGMLMI LGEGSGTRRW RCLTSSHV
Arabidopsis Description
Uncharacterized protein T5N23_100 [Source:UniProtKB/TrEMBL;Acc:Q9M1S6]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.