Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015360.1-P | Field mustard | endoplasmic reticulum, extracellular | 98.85 | 98.66 |
| CDY18267 | Canola | endoplasmic reticulum, plasma membrane | 93.67 | 93.67 |
| AT1G04890.1 | Thale cress | mitochondrion | 59.69 | 75.67 |
| CDY47332 | Canola | extracellular, plasma membrane | 18.43 | 36.78 |
| CDY01114 | Canola | extracellular, plasma membrane | 18.43 | 36.78 |
| CDY01147 | Canola | extracellular, golgi, vacuole | 33.21 | 31.28 |
| CDY68842 | Canola | vacuole | 32.63 | 30.2 |
| GSMUA_Achr6P06580_001 | Banana | nucleus | 14.97 | 26.09 |
| Solyc12g098380.1.1 | Tomato | extracellular, plasma membrane, vacuole | 36.28 | 25.37 |
| PGSC0003DMT400011603 | Potato | nucleus | 24.18 | 24.71 |
| GSMUA_Achr3P17210_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 27.64 | 23.57 |
| CDX88641 | Canola | nucleus | 4.61 | 19.67 |
| CDY09477 | Canola | nucleus | 6.91 | 19.35 |
| Zm00001d032786_P001 | Maize | plastid | 15.16 | 19.22 |
| Zm00001d014088_P001 | Maize | plastid | 18.04 | 18.99 |
| CDY14078 | Canola | nucleus | 14.01 | 18.91 |
| TraesCS2D01G272500.1 | Wheat | plastid | 17.47 | 18.76 |
| TraesCS2B01G291300.1 | Wheat | plastid | 17.47 | 18.76 |
| TraesCS2A01G273300.1 | Wheat | plastid | 17.47 | 18.76 |
| OQU91677 | Sorghum | endoplasmic reticulum, golgi | 17.27 | 18.75 |
| CDY07526 | Canola | nucleus | 9.98 | 18.06 |
| CDX78259 | Canola | nucleus | 13.82 | 17.73 |
| CDX73453 | Canola | nucleus | 14.01 | 17.63 |
| CDY08489 | Canola | nucleus | 13.05 | 17.57 |
| CDX67607 | Canola | peroxisome | 13.82 | 17.14 |
| CDY02887 | Canola | cytosol, nucleus, peroxisome | 12.28 | 16.89 |
| CDX76130 | Canola | cytosol | 12.86 | 16.83 |
| CDY04993 | Canola | nucleus | 13.24 | 16.83 |
| CDX98935 | Canola | nucleus | 13.05 | 16.67 |
| CDX70091 | Canola | nucleus | 13.63 | 16.63 |
| CDY70407 | Canola | peroxisome | 11.71 | 16.53 |
| CDX68698 | Canola | cytosol | 9.21 | 16.33 |
| CDY28219 | Canola | cytosol | 9.21 | 16.33 |
| CDX76832 | Canola | nucleus | 9.79 | 15.84 |
| CDY34794 | Canola | nucleus | 9.79 | 15.64 |
| CDY01064 | Canola | nucleus | 13.24 | 15.47 |
| CDX72271 | Canola | nucleus | 11.13 | 15.03 |
| CDY13389 | Canola | nucleus | 11.32 | 14.68 |
| CDX68162 | Canola | extracellular, plasma membrane, vacuole | 13.44 | 14.2 |
| CDY67532 | Canola | nucleus | 11.32 | 14.15 |
| CDX85859 | Canola | extracellular, plasma membrane, vacuole | 13.24 | 14.0 |
| CDY21687 | Canola | endoplasmic reticulum, vacuole | 13.63 | 13.89 |
| CDX81908 | Canola | endoplasmic reticulum, vacuole | 13.05 | 13.63 |
| CDY26705 | Canola | endoplasmic reticulum, plasma membrane, plastid | 13.44 | 13.51 |
| CDY19266 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 13.44 | 13.44 |
| CDY02772 | Canola | nucleus | 9.4 | 13.39 |
| HORVU2Hr1G066690.6 | Barley | cytosol, mitochondrion | 11.32 | 13.32 |
| CDY51277 | Canola | nucleus | 9.4 | 13.32 |
| CDY50792 | Canola | nucleus | 9.21 | 13.04 |
| CDY45396 | Canola | extracellular, golgi, vacuole | 13.44 | 12.92 |
| CDY32744 | Canola | nucleus | 9.02 | 12.84 |
| CDX73116 | Canola | extracellular, golgi, vacuole | 13.44 | 12.7 |
| CDX88643 | Canola | nucleus | 5.76 | 12.61 |
| CDY11846 | Canola | nucleus | 5.57 | 12.18 |
| CDX96274 | Canola | mitochondrion | 16.12 | 11.41 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 4.03 | 10.61 |
| CDY11550 | Canola | mitochondrion | 16.12 | 10.53 |
| CDY16985 | Canola | endoplasmic reticulum, golgi | 13.05 | 10.01 |
| CDX69426 | Canola | endoplasmic reticulum, golgi, plastid | 13.05 | 9.94 |
| CDY29652 | Canola | endoplasmic reticulum | 13.82 | 9.88 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 13.63 | 9.85 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 13.44 | 9.85 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 13.63 | 9.31 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 14.2 | 8.47 |
| CDY31127 | Canola | cytosol | 9.79 | 7.85 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 13.63 | 7.42 |
| CDX93536 | Canola | extracellular, vacuole | 13.63 | 7.37 |
| CDY07525 | Canola | peroxisome | 0.77 | 4.17 |
Protein Annotations
| EnsemblPlants:CDX89779 | EnsemblPlantsGene:GSBRNA2T00150219001 | GO:A0A078DMK7 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil |
| PANTHER:PTHR31422 | PANTHER:PTHR31422:SF3 | PFAM:PF04576 | PFscan:PS51775 | ProteinID:CDX89779 | ProteinID:CDX89779.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE3EE6 | MapMan:35.2 | : | : |
Description
BnaA10g03030D
Coordinates
chrLK031861:+:32800..34702
Molecular Weight (calculated)
59481.9 Da
IEP (calculated)
7.449
GRAVY (calculated)
-0.663
Length
521 amino acids
Sequence
(BLAST)
(BLAST)
001: MPCLDTQDWS LTGLIGAFLN LTIAYLLLCT SLFIHVVLRS LGLLGFSLPR FHNGRFGDPN MCIEGDLLAC ASEKISSVDR LIKSKIPFGS ITSDDDSKRF
101: VEMKLVRKNS GDVSNARVKD ETEEDTSRDE QNVMNLMTVQ GVKGKRFVTR RPRKGLKNPR RCRVDYGSLG SVSSSEAFDE TVKHPLMQPY DNVFIRANDD
201: RKDDVKTEER TSPSHWPELE KTVSLNSSAS LCFVRNVEEN SVKELEEALK KERAARAAVC VELDKERSAA ASAADEAMAM IHRLQDEKAA IEMEAMQFQR
301: MVEEKSTFDA EEMVILKDIL IRREREKHFL EKEVEAYRDL LVEAEESECS LPKENQKQEP QEKRALLVQE HDGTVLDMPY REDKNRYLYT SDSEVAYSRV
401: RDVYMVKEEK ENVGKKKNLE ESSANNGFIV SGIARKLPPL CRPRKQSLSS SGSRRKSMSA VDYERLKIEN EVELLRERLK AVQEERKELT RRASLPPLSS
501: KVRVASKNRG WRRSSVDLHS S
101: VEMKLVRKNS GDVSNARVKD ETEEDTSRDE QNVMNLMTVQ GVKGKRFVTR RPRKGLKNPR RCRVDYGSLG SVSSSEAFDE TVKHPLMQPY DNVFIRANDD
201: RKDDVKTEER TSPSHWPELE KTVSLNSSAS LCFVRNVEEN SVKELEEALK KERAARAAVC VELDKERSAA ASAADEAMAM IHRLQDEKAA IEMEAMQFQR
301: MVEEKSTFDA EEMVILKDIL IRREREKHFL EKEVEAYRDL LVEAEESECS LPKENQKQEP QEKRALLVQE HDGTVLDMPY REDKNRYLYT SDSEVAYSRV
401: RDVYMVKEEK ENVGKKKNLE ESSANNGFIV SGIARKLPPL CRPRKQSLSS SGSRRKSMSA VDYERLKIEN EVELLRERLK AVQEERKELT RRASLPPLSS
501: KVRVASKNRG WRRSSVDLHS S
001: MTVQGMKGKR FVTRRSRNGL KNHRRSGRVN CASLRSISSS EAFDETAKTN LMQPYDETCS NDDQKDCGKA GEGTNLSHWP EFEKTVSVNQ QVNSNSSAEQ
101: SFVRNVEKRS VRDLEELLKE ERAARATVCV ELDKERSAAA SAADEAMAMI HRLQDEKAAI EMEARQFQRL VEERSTFDAE EMVILKDILI RREREKHFLE
201: KEVEAYRQLL EETEELECSL IKEKNVPEPE HKQNKDCQER RALLVQELDG TVLDMPYREE GNRDKNRDLY KSDSEVAYSR VRDVYMVKDE TENISKKKNL
301: EESSVGKPKE SLDENSIIVS GIARKLPPLC RPRKKSLSSS GSRRKSMSAV DYERLKIENE VELLRERLKA VQEEREELTR RASLPPLPSK VRATSEKRSW
401: TRSCSMDLHS S
101: SFVRNVEKRS VRDLEELLKE ERAARATVCV ELDKERSAAA SAADEAMAMI HRLQDEKAAI EMEARQFQRL VEERSTFDAE EMVILKDILI RREREKHFLE
201: KEVEAYRQLL EETEELECSL IKEKNVPEPE HKQNKDCQER RALLVQELDG TVLDMPYREE GNRDKNRDLY KSDSEVAYSR VRDVYMVKDE TENISKKKNL
301: EESSVGKPKE SLDENSIIVS GIARKLPPLC RPRKKSLSSS GSRRKSMSAV DYERLKIENE VELLRERLKA VQEEREELTR RASLPPLPSK VRATSEKRSW
401: TRSCSMDLHS S
Arabidopsis Description
Protein of unknown function, DUF593 [Source:TAIR;Acc:AT1G04890]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.