Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 3
- golgi 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU91677 | Sorghum | endoplasmic reticulum, golgi | 83.43 | 86.04 |
| Zm00001d032786_P001 | Maize | plastid | 65.66 | 79.08 |
| TraesCS2B01G291300.1 | Wheat | plastid | 57.98 | 59.18 |
| TraesCS2D01G272500.1 | Wheat | plastid | 57.78 | 58.97 |
| TraesCS2A01G273300.1 | Wheat | plastid | 57.17 | 58.35 |
| HORVU2Hr1G066690.6 | Barley | cytosol, mitochondrion | 43.03 | 48.08 |
| Bra034886.1-P | Field mustard | cytosol | 8.48 | 32.81 |
| Bra032692.1-P | Field mustard | extracellular, plasma membrane | 15.15 | 28.74 |
| CDY01114 | Canola | extracellular, plasma membrane | 15.15 | 28.74 |
| CDY47332 | Canola | extracellular, plasma membrane | 15.15 | 28.74 |
| AT4G13160.1 | Thale cress | endoplasmic reticulum | 14.95 | 26.24 |
| Zm00001d007503_P001 | Maize | nucleus | 19.19 | 20.83 |
| GSMUA_Achr3P17210_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 23.84 | 19.31 |
| Bra032725.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 21.41 | 19.2 |
| CDY01147 | Canola | extracellular, golgi, vacuole | 21.41 | 19.17 |
| AT4G13630.1 | Thale cress | extracellular, golgi | 22.02 | 19.16 |
| CDY68842 | Canola | vacuole | 21.62 | 19.01 |
| GSMUA_Achr6P06580_001 | Banana | nucleus | 11.31 | 18.73 |
| PGSC0003DMT400011603 | Potato | nucleus | 18.99 | 18.43 |
| Bra015360.1-P | Field mustard | endoplasmic reticulum, extracellular | 19.19 | 18.2 |
| CDY18267 | Canola | endoplasmic reticulum, plasma membrane | 18.99 | 18.04 |
| CDX89779 | Canola | endoplasmic reticulum, extracellular | 18.99 | 18.04 |
| Zm00001d023648_P003 | Maize | plastid | 16.57 | 17.3 |
| AT1G04890.1 | Thale cress | mitochondrion | 14.34 | 17.27 |
| Solyc12g098380.1.1 | Tomato | extracellular, plasma membrane, vacuole | 25.66 | 17.05 |
| Zm00001d033125_P001 | Maize | nucleus | 5.45 | 16.98 |
| Zm00001d033504_P001 | Maize | nucleus | 16.97 | 16.9 |
| Zm00001d024102_P002 | Maize | nucleus | 11.92 | 16.67 |
| VIT_05s0029g00110.t01 | Wine grape | endoplasmic reticulum, golgi | 26.26 | 16.31 |
| Zm00001d013658_P001 | Maize | nucleus | 16.36 | 16.23 |
| KRH07498 | Soybean | endoplasmic reticulum, plasma membrane | 21.01 | 15.95 |
| KRH66087 | Soybean | endoplasmic reticulum, plasma membrane | 19.39 | 14.81 |
| Zm00001d032962_P003 | Maize | endoplasmic reticulum, nucleus, plasma membrane | 14.34 | 11.51 |
| Zm00001d013452_P002 | Maize | endoplasmic reticulum, plasma membrane, plastid, vacuole | 16.36 | 10.04 |
| Zm00001d032145_P001 | Maize | nucleus | 11.52 | 9.21 |
| Zm00001d047881_P002 | Maize | mitochondrion | 16.16 | 9.18 |
| Zm00001d048439_P007 | Maize | golgi, mitochondrion, nucleus, plastid | 12.32 | 7.62 |
| Zm00001d033705_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 14.95 | 7.3 |
| Zm00001d043295_P003 | Maize | golgi | 13.33 | 6.61 |
Protein Annotations
| EMBL:BT064594 | EnsemblPlants:Zm00001d014088_P001 | EnsemblPlants:Zm00001d014088_T001 | EnsemblPlantsGene:Zm00001d014088 | EntrezGene:100382517 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil | PANTHER:PTHR31422 |
| PANTHER:PTHR31422:SF3 | PFAM:PF04576 | PFscan:PS51775 | ProteinID:AQK65194.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0001948B6C | UniProt:C0P8H5 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr5:+:31964458..31969219
Molecular Weight (calculated)
54389.6 Da
IEP (calculated)
4.385
GRAVY (calculated)
-0.472
Length
495 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTPCLGAAA LSASWTAPSL TGAFLDLTLA WACLCLAALA AVAARLLALL GLPLPCTCAR PHLPCLLAFL ARYPPRAVGS LHAALRARFP FAGPTDDEAR
101: LQKGVEEEGE EEAIDAPKEE GDFRRRVEAR AELQMELEKE RSAAASAAEE AMSMILRLQK EKSALEIEAR QQRRTADERC AFYEDEVEEL RDIVLVRERE
201: VRALRKEVDA YRRLLGFSAT EEDEEEDDEQ EMVTPHSFPM YEGEPSSSKS VDANRMQHFG NDSGFSFKTP SPREQPTVPP LTAGQINVGS DDCVAVQTPA
301: KVPVVQSRLE LDSSEDEDED EDDGAETVEI LPLSARSQDL DQGSHFHADT AQGMESTCTK EQTAHAFQEI ECPGIDKIVN DQIGSKNDAN VYDVHVVDDI
401: RFSTEVKGLI GRSFSEATMQ AERLQSRAVA DDLLEKSLNA IKGAQDKIRN AANERRQSLQ LQLLEDIADQ LQGIKDAAEA GRQVFCAAPK SSKRS
101: LQKGVEEEGE EEAIDAPKEE GDFRRRVEAR AELQMELEKE RSAAASAAEE AMSMILRLQK EKSALEIEAR QQRRTADERC AFYEDEVEEL RDIVLVRERE
201: VRALRKEVDA YRRLLGFSAT EEDEEEDDEQ EMVTPHSFPM YEGEPSSSKS VDANRMQHFG NDSGFSFKTP SPREQPTVPP LTAGQINVGS DDCVAVQTPA
301: KVPVVQSRLE LDSSEDEDED EDDGAETVEI LPLSARSQDL DQGSHFHADT AQGMESTCTK EQTAHAFQEI ECPGIDKIVN DQIGSKNDAN VYDVHVVDDI
401: RFSTEVKGLI GRSFSEATMQ AERLQSRAVA DDLLEKSLNA IKGAQDKIRN AANERRQSLQ LQLLEDIADQ LQGIKDAAEA GRQVFCAAPK SSKRS
001: MDYQESYRLT FYGILVAFME LAFAYCLLCV SAFVFITSKL LLFMPCIGYQ NSDLCIQKLL FDWPFRIILR VQKLATTNRP SVLHHQEQEQ EQEQEQEEKT
101: MVDKDKNSEL MDRVRLLEVA VEQEKVAKAA LMVELEQERA ASASAADEAM AMILRLQADK ASLEMEGKQY ERMIDEKFAY DEEEMNILKE ILFKREREKH
201: FLEKELETYK HIDDDQETED NEKRECDEDG EPIVYDVHVI EDNSQTKVRD DDVAEHKEMK EEEIVKDHDS VSSPTSSSTH LP
101: MVDKDKNSEL MDRVRLLEVA VEQEKVAKAA LMVELEQERA ASASAADEAM AMILRLQADK ASLEMEGKQY ERMIDEKFAY DEEEMNILKE ILFKREREKH
201: FLEKELETYK HIDDDQETED NEKRECDEDG EPIVYDVHVI EDNSQTKVRD DDVAEHKEMK EEEIVKDHDS VSSPTSSSTH LP
Arabidopsis Description
At4g13160 [Source:UniProtKB/TrEMBL;Acc:Q9SVR1]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.