Factsheet for Bra032692.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

nucleus 2
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01114	Canola	extracellular, plasma membrane	100.0	100.0
Bra034886.1-P	Field mustard	cytosol	41.0	83.59
AT4G13160.1	Thale cress	endoplasmic reticulum	71.26	65.96
Bra032725.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	41.38	19.57
PGSC0003DMT400011603	Potato	nucleus	36.78	18.82
Bra015360.1-P	Field mustard	endoplasmic reticulum, extracellular	36.78	18.39
KRH66087	Soybean	endoplasmic reticulum, plasma membrane	45.59	18.36
KRH07498	Soybean	endoplasmic reticulum, plasma membrane	45.59	18.25
TraesCS2D01G272500.1	Wheat	plastid	32.18	17.32
TraesCS2A01G273300.1	Wheat	plastid	32.18	17.32
TraesCS2B01G291300.1	Wheat	plastid	31.8	17.11
Solyc12g098380.1.1	Tomato	extracellular, plasma membrane, vacuole	48.66	17.05
GSMUA_Achr6P06580_001	Banana	nucleus	19.16	16.72
Zm00001d032786_P001	Maize	plastid	26.05	16.55
GSMUA_Achr3P17210_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	35.63	15.22
Zm00001d014088_P001	Maize	plastid	28.74	15.15
Bra006800.1-P	Field mustard	cytosol	8.81	14.2
OQU91677	Sorghum	endoplasmic reticulum, golgi	25.67	13.96
Bra039233.1-P	Field mustard	nucleus	16.48	13.19
Bra006798.1-P	Field mustard	nucleus	15.33	13.07
Bra003783.1-P	Field mustard	extracellular, plasma membrane	23.37	12.87
Bra038684.1-P	Field mustard	nucleus	19.54	12.66
HORVU2Hr1G066690.6	Barley	cytosol, mitochondrion	21.07	12.42
Bra007093.1-P	Field mustard	nucleus	19.16	12.32
Bra020409.1-P	Field mustard	nucleus	14.56	11.95
Bra009206.1-P	Field mustard	nucleus	19.54	11.94
Bra031059.1-P	Field mustard	endoplasmic reticulum, vacuole	23.37	11.94
Bra025705.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	22.99	11.58
Bra028728.1-P	Field mustard	nucleus	18.01	11.55
Bra011226.1-P	Field mustard	cytosol	14.18	11.25
Bra034805.1-P	Field mustard	nucleus	19.16	11.19
Bra002693.1-P	Field mustard	nucleus	15.71	11.14
Bra002694.1-P	Field mustard	nucleus	15.71	11.14
Bra014792.1-P	Field mustard	cytosol	16.86	11.06
Bra015891.1-P	Field mustard	endoplasmic reticulum, golgi	21.84	10.5
Bra008601.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	21.84	8.26
Bra021657.1-P	Field mustard	endoplasmic reticulum	21.46	7.55
Bra018297.1-P	Field mustard	endoplasmic reticulum, extracellular	19.54	7.45
Bra016190.1-P	Field mustard	mitochondrion	24.52	7.35
Bra018599.1-P	Field mustard	extracellular, vacuole	21.07	5.74
Bra030742.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid, vacuole	21.84	4.95

Protein Annotations

EnsemblPlants:Bra032692.1	EnsemblPlants:Bra032692.1-P	EnsemblPlantsGene:Bra032692	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil	PANTHER:PTHR31422	PANTHER:PTHR31422:SF3	PFAM:PF04576
PFscan:PS51775	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002543FFA	UniProt:M4EV59	MapMan:35.2

Description

AT4G13160 (E=4e-069) | unknown protein

Coordinates

chrA04:-:5447831..5448616

Molecular Weight (calculated)

30487.2 Da

IEP (calculated)

4.536

GRAVY (calculated)

-0.602

Length

261 amino acids

Sequence
(BLAST)

001: MDYYRPTLCG ILVAFLELAF AYCLLCVSAF VFIASKFLPC SGSLGYQNVY KLLFDWPFEI IQRIQNMAMT SRPRVWHHQE QEEEKNSVIQ SKSLELMNKV
101: RFLEKAVEEE RLARAALMVE LEEERAASAS AADEAMAMIL RLQADKASLE MEGKQYERMI EEKFAYDEEE MNILKEILFK REREKHFLEK ELETYRQSDD
201: DRDDAGDREP IVYDVHVIED DKNSKMKHDG TAVHKERGND DQMNQMEDVL KDRESSPSPS S

Best Arabidopsis Sequence Match ( AT4G13160.1 )
(BLAST)

001: MDYQESYRLT FYGILVAFME LAFAYCLLCV SAFVFITSKL LLFMPCIGYQ NSDLCIQKLL FDWPFRIILR VQKLATTNRP SVLHHQEQEQ EQEQEQEEKT
101: MVDKDKNSEL MDRVRLLEVA VEQEKVAKAA LMVELEQERA ASASAADEAM AMILRLQADK ASLEMEGKQY ERMIDEKFAY DEEEMNILKE ILFKREREKH
201: FLEKELETYK HIDDDQETED NEKRECDEDG EPIVYDVHVI EDNSQTKVRD DDVAEHKEMK EEEIVKDHDS VSSPTSSSTH LP

Arabidopsis Description

At4g13160 [Source:UniProtKB/TrEMBL;Acc:Q9SVR1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.