Factsheet for Bra015891.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

nucleus 1
golgi 3
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73116	Canola	extracellular, golgi, vacuole	95.58	94.19
CDY45396	Canola	extracellular, golgi, vacuole	93.92	94.1
Bra003783.1-P	Field mustard	extracellular, plasma membrane	69.24	79.32
AT1G74830.1	Thale cress	extracellular, golgi, vacuole	77.9	78.04
Bra025705.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	60.41	63.32
Bra031059.1-P	Field mustard	endoplasmic reticulum, vacuole	59.3	63.01
Solyc12g027730.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	44.57	46.63
PGSC0003DMT400030876	Potato	endoplasmic reticulum, extracellular	44.38	46.53
KRH54475	Soybean	endoplasmic reticulum	47.33	42.69
KRH63445	Soybean	endoplasmic reticulum	48.07	42.44
PGSC0003DMT400083120	Potato	endoplasmic reticulum	44.75	40.64
PGSC0003DMT400062848	Potato	golgi	44.75	40.57
Solyc03g113600.2.1	Tomato	golgi	44.38	40.3
VIT_17s0000g05320.t01	Wine grape	endoplasmic reticulum, golgi	46.04	40.26
Solyc06g071190.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	46.04	39.12
Bra034886.1-P	Field mustard	cytosol	7.55	32.03
Bra032692.1-P	Field mustard	extracellular, plasma membrane	10.5	21.84
Bra008601.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	23.94	18.84
Bra028728.1-P	Field mustard	nucleus	12.34	16.46
Bra018297.1-P	Field mustard	endoplasmic reticulum, extracellular	20.44	16.2
Bra009206.1-P	Field mustard	nucleus	12.52	15.93
Bra007093.1-P	Field mustard	nucleus	11.6	15.52
Bra021657.1-P	Field mustard	endoplasmic reticulum	21.18	15.5
Bra018599.1-P	Field mustard	extracellular, vacuole	26.15	14.82
Bra039233.1-P	Field mustard	nucleus	8.66	14.42
Bra006798.1-P	Field mustard	nucleus	8.1	14.38
Bra016190.1-P	Field mustard	mitochondrion	22.84	14.24
Bra038684.1-P	Field mustard	nucleus	10.5	14.14
Bra014792.1-P	Field mustard	cytosol	9.94	13.57
Bra015360.1-P	Field mustard	endoplasmic reticulum, extracellular	12.89	13.41
Bra034805.1-P	Field mustard	nucleus	10.87	13.2
Bra020409.1-P	Field mustard	nucleus	7.37	12.58
Bra006800.1-P	Field mustard	cytosol	3.68	12.35
Bra002693.1-P	Field mustard	nucleus	8.29	12.23
Bra002694.1-P	Field mustard	nucleus	8.29	12.23
Bra032725.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	12.15	11.96
Bra011226.1-P	Field mustard	cytosol	7.18	11.85
Bra030742.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid, vacuole	24.49	11.55

Protein Annotations

EnsemblPlants:Bra015891.1	EnsemblPlants:Bra015891.1-P	EnsemblPlantsGene:Bra015891	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0017022	InterPro:GTD-bd	InterPro:IPR007656
ncoils:Coil	PANTHER:PTHR31448	PANTHER:PTHR31448:SF9	PFAM:PF04576	PFscan:PS51775	SEG:seg
TMHMM:TMhelix	UniParc:UPI0002541E8F	UniProt:M4DHB4	MapMan:20.2.4.3	:	:

Description

AT1G74830 (E=4e-180) | unknown protein

Coordinates

chrA07:-:20346042..20347766

Molecular Weight (calculated)

61456.9 Da

IEP (calculated)

4.395

GRAVY (calculated)

-0.586

Length

543 amino acids

Sequence
(BLAST)

001: MIFKRSFKNF VEQELGSFPK FLIYTVLEWI LITALFVDGV LAFLSNQYAR FFDLDAPCLL CTRIDHVLVP RDPHFYYNDS ICDSHKKKVS SLAYCHVHKK
101: LSEIKHMCEG CLLSFATEKE SDCDTYKSLI GILHKDLEVL IEDERDLPLG LKKQDDLVQT TTTHLIDYKT DSLKQHCSCC GELLKTKSEK FLKKNNSFLA
201: PAPSPRVSYN KLSEINESEF KDFDVEERTP SFVRGGNKFF GVPLSDSAQN SPRWSVRSLR KPPSLDKIEI PDSNGESILN QLKKEVRLDK KSLIDLYMEL
301: DEERSASAVA ANNAMAMITK LQAEKSAIQM EALQYQRMMD EQAEYDQEAL QSMSSDLAKK EEEFKELEAE FEAYRERYGC LTDDEASGDE FLEEQGNARA
401: DDEGAGDEFL EEHGNARADD DCQETKPDSD FEDCSSNQEE DVENVDQNRS CKSEESGLLV QMKSSEQSTE VNGASAEEEK GSVSKEGIVK ELSEITERLS
501: ALQSDGELLK HIADVSEGEA MLLQISQNLH MLRSSFVAMP SES

Best Arabidopsis Sequence Match ( AT1G74830.1 )
(BLAST)

001: MYIQLLCFFL FLFLLLQATM SKRSFKKFVE QELGSLPHFL IYTVLEWSLI VFLFIDGVIA FLSNQFAKFF DLNIPCLLCT RIDHILVPRD PQFYYNESIC
101: DSHKKKVSSL AYCHVHKKLS EIKHMCEGCL LSFATEKDSD CDTYKSLIGI LHKDLELLID DERDLPLAFK KDDNLVQTTK NLVDYKTNNI KNDSLKQHCS
201: CCGELLKIKS EKLPKNNNSF LAPAPSPRVS HNKLSENESE FKDMDVDRTP SFVRGGNKFF GIPLSDSAQN SPRWSVRSLK KSVLNKTENA SDTTDPTGES
301: ILNQLKKEVR LDKKSLIDLY MELDEERSAS AVAANEAMAM ITRLQAEKAA VQMEALQYQR MMDEQAEYDQ EALQSMSSEL AKREEEMKEL EAEFEVYREK
401: YGCLTDQEDA REEFHKQNGN ASAYDDCQET KPVSDLAVSS SNQQENGENI DQNGQSKRSE ESTAENVVSA DEEKGSESKE GIVKELSEIT ERLSTLQSNG
501: DLLKHIADVL DVSEGEAILL QISQNLHMLR SFVAMPSESM NL

Arabidopsis Description

MYOB6Probable myosin-binding protein 6 [Source:UniProtKB/Swiss-Prot;Acc:F4HVS6]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.