Factsheet for Solyc03g113600.2.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400062848	Potato	golgi	94.98	94.82
Solyc12g027730.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	58.53	67.44
Solyc06g071190.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	65.05	60.88
VIT_17s0000g05320.t01	Wine grape	endoplasmic reticulum, golgi	51.17	49.28
KRH54475	Soybean	endoplasmic reticulum	48.16	47.84
KRH63445	Soybean	endoplasmic reticulum	49.0	47.64
Bra003783.1-P	Field mustard	extracellular, plasma membrane	36.96	46.62
CDY26705	Canola	endoplasmic reticulum, plasma membrane, plastid	40.3	46.53
CDY19266	Canola	endoplasmic reticulum, nucleus, plasma membrane	40.3	46.26
AT1G18990.1	Thale cress	endoplasmic reticulum, plasma membrane	40.47	46.18
Bra025705.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	39.97	46.14
CDY21687	Canola	endoplasmic reticulum, vacuole	38.63	45.21
Bra031059.1-P	Field mustard	endoplasmic reticulum, vacuole	38.63	45.21
CDX85859	Canola	extracellular, plasma membrane, vacuole	36.96	44.83
CDX81908	Canola	endoplasmic reticulum, vacuole	37.29	44.69
CDX68162	Canola	extracellular, plasma membrane, vacuole	36.62	44.42
Bra015891.1-P	Field mustard	endoplasmic reticulum, golgi	40.3	44.38
AT1G74830.1	Thale cress	extracellular, golgi, vacuole	39.97	44.1
CDY45396	Canola	extracellular, golgi, vacuole	39.8	43.91
CDX73116	Canola	extracellular, golgi, vacuole	40.13	43.56
Solyc11g045470.1.1	Tomato	cytosol	5.35	38.1
Solyc04g007870.2.1	Tomato	endoplasmic reticulum, golgi	30.27	21.75
Solyc01g097040.2.1	Tomato	golgi, plasma membrane, plastid	28.93	18.99
Solyc10g081620.1.1	Tomato	cytosol, plastid	13.55	15.7
Solyc07g005910.2.1	Tomato	nucleus	11.04	14.57
Solyc09g066140.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	25.92	12.97
Solyc12g098380.1.1	Tomato	extracellular, plasma membrane, vacuole	15.55	12.48
Solyc11g020850.1.1	Tomato	nucleus	10.87	12.38
Solyc12g009900.1.1	Tomato	cytosol	9.87	9.26
Solyc11g045480.1.1	Tomato	mitochondrion	2.84	8.37

Protein Annotations

EnsemblPlants:Solyc03g113600.2.1	EnsemblPlantsGene:Solyc03g113600.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0017022	InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil
PANTHER:PTHR31448	PANTHER:PTHR31448:SF9	PFAM:PF04576	PFscan:PS51775	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002767DF6	UniProt:K4BKL2	MapMan:20.2.4.3	:	:	:

Description

No Description!

Coordinates

chr3:+:63677028..63679970

Molecular Weight (calculated)

67611.9 Da

IEP (calculated)

5.016

GRAVY (calculated)

-0.535

Length

598 amino acids

Sequence
(BLAST)

001: MASRSFKCLV EQKLGRVGVF CVYAVLEWVM ILLLFIDGFL ALFTNEFAKF FELKVPCLLC TRIDHIFIKR NSSFYYNESI CEGHKKDISS LAYCHVHKKL
101: SDIRNMCEGC LLSFATEKEA DCDKYKSLVG ILHKDIDCFV DDDKRMSIKS VKNEEEVIKT ASVVLRNCSC CGEPLKLRTK YARNSSINGN HYTQAPASSP
201: RSPLTWKNEE SGNMELPRIQ YTKLKFSSDN ESILPDDEGH QNAGREDIKA ATAPLLPDPE DIHEESSKTP VSARNKFFGI PLTDSAQASP KWPNKPRKLG
301: GDKSEFISDA NDASAVNEAD DDIVHSLKRQ VRLDRKSLME LYMELDEERS ASAVAANNAM AMITRLQAEK AAVQMEALQY QRMMEEQAEY DQEALQVMKD
401: LVLKREEEIK VLEAEIDTYR ERYGIIKKVG SEVCEVDADD DYQELRSQSA SSFDGRSDCS SPRQADHNGV NGFHIGCPGE YRDENIDESN LDFENERSYL
501: QGLLTTLEKQ IKIPPDVDSH VLESNVIQDK GNDNKVILTR EVSLLRERLR AVEAESGFLK HAAMTLQRGG DGTKLLTEIA QHLRELRHRD TATEVADA

Best Arabidopsis Sequence Match ( AT1G74830.1 )
(BLAST)

001: MYIQLLCFFL FLFLLLQATM SKRSFKKFVE QELGSLPHFL IYTVLEWSLI VFLFIDGVIA FLSNQFAKFF DLNIPCLLCT RIDHILVPRD PQFYYNESIC
101: DSHKKKVSSL AYCHVHKKLS EIKHMCEGCL LSFATEKDSD CDTYKSLIGI LHKDLELLID DERDLPLAFK KDDNLVQTTK NLVDYKTNNI KNDSLKQHCS
201: CCGELLKIKS EKLPKNNNSF LAPAPSPRVS HNKLSENESE FKDMDVDRTP SFVRGGNKFF GIPLSDSAQN SPRWSVRSLK KSVLNKTENA SDTTDPTGES
301: ILNQLKKEVR LDKKSLIDLY MELDEERSAS AVAANEAMAM ITRLQAEKAA VQMEALQYQR MMDEQAEYDQ EALQSMSSEL AKREEEMKEL EAEFEVYREK
401: YGCLTDQEDA REEFHKQNGN ASAYDDCQET KPVSDLAVSS SNQQENGENI DQNGQSKRSE ESTAENVVSA DEEKGSESKE GIVKELSEIT ERLSTLQSNG
501: DLLKHIADVL DVSEGEAILL QISQNLHMLR SFVAMPSESM NL

Arabidopsis Description

MYOB6Probable myosin-binding protein 6 [Source:UniProtKB/Swiss-Prot;Acc:F4HVS6]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.