Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400028965 | Potato | nucleus | 95.81 | 95.81 |
| Solyc11g020850.1.1 | Tomato | nucleus | 83.89 | 72.38 |
| Solyc11g045470.1.1 | Tomato | cytosol | 9.05 | 48.81 |
| CDX88641 | Canola | nucleus | 12.14 | 45.08 |
| VIT_11s0037g00610.t01 | Wine grape | nucleus | 46.14 | 44.56 |
| Bra006798.1-P | Field mustard | nucleus | 28.26 | 41.83 |
| CDY50792 | Canola | nucleus | 32.89 | 40.49 |
| CDY51277 | Canola | nucleus | 32.45 | 39.95 |
| Bra002693.1-P | Field mustard | nucleus | 32.23 | 39.67 |
| AT5G57830.1 | Thale cress | nucleus | 33.77 | 39.53 |
| CDY32744 | Canola | nucleus | 31.57 | 39.07 |
| Bra020409.1-P | Field mustard | nucleus | 27.15 | 38.68 |
| Bra002694.1-P | Field mustard | nucleus | 31.35 | 38.59 |
| CDY02772 | Canola | nucleus | 31.13 | 38.52 |
| Bra006800.1-P | Field mustard | cytosol | 13.69 | 38.27 |
| CDY11846 | Canola | nucleus | 19.43 | 36.97 |
| KRH63109 | Soybean | nucleus | 37.31 | 36.66 |
| CDX88643 | Canola | nucleus | 19.21 | 36.55 |
| KRH72337 | Soybean | nucleus | 37.53 | 36.25 |
| KRH03013 | Soybean | nucleus | 37.09 | 35.44 |
| KRH37764 | Soybean | nucleus | 35.54 | 35.15 |
| KRH12784 | Soybean | nucleus | 35.1 | 34.87 |
| KRH55008 | Soybean | cytosol | 12.36 | 34.78 |
| CDY28219 | Canola | cytosol | 22.3 | 34.35 |
| CDX68698 | Canola | cytosol | 21.41 | 32.99 |
| CDX76832 | Canola | nucleus | 22.08 | 31.06 |
| CDY34794 | Canola | nucleus | 22.3 | 30.98 |
| Bra011226.1-P | Field mustard | cytosol | 22.08 | 30.4 |
| Bra039233.1-P | Field mustard | nucleus | 21.85 | 30.37 |
| AT4G30830.1 | Thale cress | nucleus | 24.28 | 30.3 |
| CDX72271 | Canola | nucleus | 25.61 | 30.05 |
| AT2G24140.2 | Thale cress | nucleus | 20.31 | 28.4 |
| CDY13389 | Canola | nucleus | 24.28 | 27.36 |
| Os08t0269000-01 | Rice | cytosol, golgi, nucleus | 15.89 | 24.83 |
| TraesCS5D01G410200.1 | Wheat | nucleus | 19.43 | 23.22 |
| TraesCS5A01G400200.1 | Wheat | nucleus | 19.43 | 23.22 |
| TraesCS5B01G405000.1 | Wheat | nucleus | 18.98 | 22.81 |
| GSMUA_Achr10P... | Banana | nucleus | 23.62 | 22.2 |
| TraesCS7D01G282800.1 | Wheat | nucleus | 20.31 | 21.1 |
| TraesCS7B01G199800.1 | Wheat | nucleus | 20.31 | 20.77 |
| TraesCS7A01G285400.1 | Wheat | nucleus | 20.31 | 20.77 |
| Zm00001d024102_P002 | Maize | nucleus | 16.11 | 20.62 |
| HORVU5Hr1G097200.5 | Barley | cytosol | 19.21 | 20.33 |
| OQU80230 | Sorghum | cytosol | 17.88 | 20.25 |
| Os08t0442350-01 | Rice | nucleus | 21.85 | 19.88 |
| Solyc10g081620.1.1 | Tomato | cytosol, plastid | 22.08 | 19.38 |
| Solyc12g009900.1.1 | Tomato | cytosol | 25.83 | 18.37 |
| OQU80548 | Sorghum | nucleus | 20.75 | 17.8 |
| Zm00001d032145_P001 | Maize | nucleus | 20.75 | 15.19 |
| Solyc12g027730.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 13.69 | 11.95 |
| Solyc11g045480.1.1 | Tomato | mitochondrion | 5.08 | 11.33 |
| Solyc03g113600.2.1 | Tomato | golgi | 14.57 | 11.04 |
| Solyc12g098380.1.1 | Tomato | extracellular, plasma membrane, vacuole | 17.66 | 10.74 |
| Solyc06g071190.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 14.35 | 10.17 |
| Solyc04g007870.2.1 | Tomato | endoplasmic reticulum, golgi | 16.11 | 8.77 |
| Solyc01g097040.2.1 | Tomato | golgi, plasma membrane, plastid | 14.13 | 7.03 |
| CDY31127 | Canola | cytosol | 9.71 | 6.77 |
| Solyc09g066140.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 13.47 | 5.1 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 0.22 | 0.51 |
Protein Annotations
| EnsemblPlants:Solyc07g005910.2.1 | EnsemblPlantsGene:Solyc07g005910.2 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil | PANTHER:PTHR31422 |
| PANTHER:PTHR31422:SF1 | PFAM:PF04576 | PFscan:PS51775 | SEG:seg | UniParc:UPI000276C1AB | UniProt:K4CB62 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7:+:748702..750452
Molecular Weight (calculated)
51291.1 Da
IEP (calculated)
4.669
GRAVY (calculated)
-0.739
Length
453 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSYMPQVD VASLKETLCA QQQLLQKLYG ELDEEREASS SAASEALSMI LRLQGEKAAV RMEAEQYKRL AEEKMCHAEE SLAIFEDLFY GKEMEIAALE
101: YQVQAYRYKL LSMGCVDPGV GEFKYPENLL QRNENLAGEM NLQALGRRNS APPFPLKIPK RGAMEIDDSS SEIDSNSKTV EEYTGQEMNE QQLDTEKKTD
201: ISISTTGSIN SYWQQIRKLD DRVKDITGVS YANFRSETRS PSPLSQRSIK ISKSENEWYQ PPNLHVSKSE NDTPADSGCS PNVLDVFEVP RADKDTIDIG
301: LPPKHDRKMV SHNDERLERP DSAQQEAVKS SVRDEADLLK KYFVSAQREN KLRRASEAAA ITCHLAISRP TTSISETSES HQPNRTSEIV EVGREASRYE
401: MARDEELKLL HDIKEQLNLM HSEIQSLKSD KLPPSDDEPS LLLLSEAMTH FWL
101: YQVQAYRYKL LSMGCVDPGV GEFKYPENLL QRNENLAGEM NLQALGRRNS APPFPLKIPK RGAMEIDDSS SEIDSNSKTV EEYTGQEMNE QQLDTEKKTD
201: ISISTTGSIN SYWQQIRKLD DRVKDITGVS YANFRSETRS PSPLSQRSIK ISKSENEWYQ PPNLHVSKSE NDTPADSGCS PNVLDVFEVP RADKDTIDIG
301: LPPKHDRKMV SHNDERLERP DSAQQEAVKS SVRDEADLLK KYFVSAQREN KLRRASEAAA ITCHLAISRP TTSISETSES HQPNRTSEIV EVGREASRYE
401: MARDEELKLL HDIKEQLNLM HSEIQSLKSD KLPPSDDEPS LLLLSEAMTH FWL
001: MVERTMSLGV GGNGETSGVR ETMWAQQELL QKINQELDAE REASSSAASE ALSMILRLQG EKAALEMEAS QYKRMAEEKM CHAETSLVLF EDLIYQKEME
101: IASLEFQVQA YRCKLLSLGC SDPAVIENKF PETLIFSGEN SRGNQKRKMK RNLSSPFDGI SSERSLLLSD VNGESFEEKK GLVESSSVSP REDLNAYWEQ
201: IRRIDEHVRE ISDSRDTQKA SKFPLIRRES ISHALVSQVS NTILESAKSD VSSIMEMMKN PERFSVKDAS LETPILSPKN VQDIFEVPRT KESLTIISEE
301: EEAEERNVRG KMVTSNYDRK VSKPPRDTSI KGEHLSLLKE IREQLNVMQS EMRSLRSELH HQSKPVSNPE EDLVLNSIQE AMIHFWL
101: IASLEFQVQA YRCKLLSLGC SDPAVIENKF PETLIFSGEN SRGNQKRKMK RNLSSPFDGI SSERSLLLSD VNGESFEEKK GLVESSSVSP REDLNAYWEQ
201: IRRIDEHVRE ISDSRDTQKA SKFPLIRRES ISHALVSQVS NTILESAKSD VSSIMEMMKN PERFSVKDAS LETPILSPKN VQDIFEVPRT KESLTIISEE
301: EEAEERNVRG KMVTSNYDRK VSKPPRDTSI KGEHLSLLKE IREQLNVMQS EMRSLRSELH HQSKPVSNPE EDLVLNSIQE AMIHFWL
Arabidopsis Description
Protein of unknown function, DUF593 [Source:TAIR;Acc:AT5G57830]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.