Factsheet for Bra006798.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88643	Canola	nucleus	77.12	99.16
Bra006800.1-P	Field mustard	cytosol	48.04	90.74
Bra020409.1-P	Field mustard	nucleus	70.92	68.24
AT5G57830.1	Thale cress	nucleus	81.05	64.08
Bra002693.1-P	Field mustard	nucleus	76.8	63.86
Bra002694.1-P	Field mustard	nucleus	75.49	62.77
VIT_11s0037g00610.t01	Wine grape	nucleus	48.69	31.77
Bra039233.1-P	Field mustard	nucleus	31.37	29.45
PGSC0003DMT400023950	Potato	nucleus	41.18	28.31
Solyc07g005910.2.1	Tomato	nucleus	41.83	28.26
PGSC0003DMT400028965	Potato	nucleus	41.5	28.04
Bra034886.1-P	Field mustard	cytosol	11.44	27.34
Bra011226.1-P	Field mustard	cytosol	27.45	25.53
KRH63109	Soybean	nucleus	37.25	24.73
KRH72337	Soybean	nucleus	37.25	24.31
KRH37764	Soybean	nucleus	35.62	23.8
Solyc11g020850.1.1	Tomato	nucleus	40.2	23.43
KRH03013	Soybean	nucleus	35.95	23.21
KRH12784	Soybean	nucleus	34.31	23.03
KRH55008	Soybean	cytosol	11.76	22.36
Os08t0269000-01	Rice	cytosol, golgi, nucleus	17.97	18.97
TraesCS5B01G405000.1	Wheat	nucleus	22.55	18.3
TraesCS5D01G410200.1	Wheat	nucleus	22.55	18.21
Bra028728.1-P	Field mustard	nucleus	24.18	18.18
TraesCS5A01G400200.1	Wheat	nucleus	22.22	17.94
Zm00001d024102_P002	Maize	nucleus	19.93	17.23
TraesCS7D01G282800.1	Wheat	nucleus	23.2	16.28
GSMUA_Achr10P...	Banana	nucleus	25.16	15.98
HORVU5Hr1G097200.5	Barley	cytosol	22.22	15.89
TraesCS7B01G199800.1	Wheat	nucleus	22.88	15.8
TraesCS7A01G285400.1	Wheat	nucleus	22.55	15.58
OQU80230	Sorghum	cytosol	20.26	15.5
Bra032692.1-P	Field mustard	extracellular, plasma membrane	13.07	15.33
Bra009206.1-P	Field mustard	nucleus	21.24	15.22
Bra014792.1-P	Field mustard	cytosol	19.61	15.08
Os08t0442350-01	Rice	nucleus	24.51	15.06
Bra007093.1-P	Field mustard	nucleus	19.61	14.78
OQU80548	Sorghum	nucleus	25.16	14.58
Bra034805.1-P	Field mustard	nucleus	20.91	14.32
Solyc12g009900.1.1	Tomato	cytosol	28.76	13.81
PGSC0003DMT400020469	Potato	cytosol	29.09	12.82
Bra038684.1-P	Field mustard	nucleus	16.67	12.66
Zm00001d032145_P001	Maize	nucleus	23.53	11.63
Bra031059.1-P	Field mustard	endoplasmic reticulum, vacuole	15.36	9.2
Bra025705.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	15.36	9.07
Bra032725.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	16.34	9.06
Bra015360.1-P	Field mustard	endoplasmic reticulum, extracellular	15.36	9.0
Bra003783.1-P	Field mustard	extracellular, plasma membrane	13.07	8.44
Bra015891.1-P	Field mustard	endoplasmic reticulum, golgi	14.38	8.1
Bra008601.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	16.99	7.54
Bra018297.1-P	Field mustard	endoplasmic reticulum, extracellular	13.4	5.99
Bra016190.1-P	Field mustard	mitochondrion	16.34	5.74
Bra021657.1-P	Field mustard	endoplasmic reticulum	13.4	5.53
Bra018599.1-P	Field mustard	extracellular, vacuole	13.4	4.28
Bra030742.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid, vacuole	12.09	3.21

Protein Annotations

EnsemblPlants:Bra006798.1	EnsemblPlants:Bra006798.1-P	EnsemblPlantsGene:Bra006798	InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil
PANTHER:PTHR31422	PANTHER:PTHR31422:SF1	PFAM:PF04576	PFscan:PS51775	SEG:seg	UniParc:UPI000254038B
UniProt:M4CRF7	MapMan:35.1	:	:	:	:

Description

AT5G57830 (E=4e-044) | unknown protein

Coordinates

chrA03:+:5077014..5078184

Molecular Weight (calculated)

34937.7 Da

IEP (calculated)

5.720

GRAVY (calculated)

-0.565

Length

306 amino acids

Sequence
(BLAST)

001: MVERTMSLGV GVNKETLRAQ QELLQKITHE LDAEREASST AASEALSMIL RLQGEKAALE MEASQYKRMS EEKMCHAETS LTLFEDLIYR KEMEMASLEF
101: QVQAYRCKLL SLGCADVQAK EKKGVESSSL SPRQDLSACW EEIRRIDDHV REVSESRDVA KGSKWSLLRC ESISHALVSQ VSNTVFESAK SDVSSIMEMI
201: KNPERFSASD EVPRTKESLT IISEERNVGG KMVSSDYKRK VSKPPKDTSI EAEHMSLLKE IREQISEMQS EMRSLRSELH KTRLVSHREE DRAINSIQEV
301: MIHFWL

Best Arabidopsis Sequence Match ( AT5G57830.1 )
(BLAST)

001: MVERTMSLGV GGNGETSGVR ETMWAQQELL QKINQELDAE REASSSAASE ALSMILRLQG EKAALEMEAS QYKRMAEEKM CHAETSLVLF EDLIYQKEME
101: IASLEFQVQA YRCKLLSLGC SDPAVIENKF PETLIFSGEN SRGNQKRKMK RNLSSPFDGI SSERSLLLSD VNGESFEEKK GLVESSSVSP REDLNAYWEQ
201: IRRIDEHVRE ISDSRDTQKA SKFPLIRRES ISHALVSQVS NTILESAKSD VSSIMEMMKN PERFSVKDAS LETPILSPKN VQDIFEVPRT KESLTIISEE
301: EEAEERNVRG KMVTSNYDRK VSKPPRDTSI KGEHLSLLKE IREQLNVMQS EMRSLRSELH HQSKPVSNPE EDLVLNSIQE AMIHFWL

Arabidopsis Description

Protein of unknown function, DUF593 [Source:TAIR;Acc:AT5G57830]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.