Factsheet for Bra034805.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08489	Canola	nucleus	84.12	97.16
Bra038684.1-P	Field mustard	nucleus	61.52	68.24
AT3G11850.2	Thale cress	nucleus	69.35	61.51
Bra009206.1-P	Field mustard	nucleus	56.15	58.78
Bra028728.1-P	Field mustard	nucleus	51.68	56.76
VIT_08s0032g00720.t01	Wine grape	plastid	55.03	47.31
KRH68055	Soybean	cytosol	48.99	46.79
Bra014792.1-P	Field mustard	cytosol	39.15	43.97
Bra007093.1-P	Field mustard	nucleus	37.58	41.38
GSMUA_Achr8P26680_001	Banana	cytosol	26.62	39.27
GSMUA_Achr1P14210_001	Banana	cytosol	31.1	38.94
GSMUA_Achr2P12800_001	Banana	cytosol, nucleus, plasma membrane	38.26	38.0
GSMUA_Achr8P04680_001	Banana	cytosol, mitochondrion	31.32	37.33
GSMUA_Achr3P15020_001	Banana	nucleus	37.58	37.25
KRG96316	Soybean	cytosol	45.64	35.17
GSMUA_Achr4P22730_001	Banana	nucleus, plastid	37.14	34.8
Zm00001d033504_P001	Maize	nucleus	34.0	30.58
OQU91257	Sorghum	nucleus	34.23	29.94
TraesCS5D01G380300.1	Wheat	cytosol	26.4	29.65
TraesCS1D01G145300.1	Wheat	cytosol	24.83	29.21
Os03t0650800-00	Rice	nucleus	32.66	29.2
Zm00001d013658_P001	Maize	nucleus	32.44	29.06
TraesCS1B01G165300.1	Wheat	plastid	31.1	29.02
TraesCS4A01G159000.1	Wheat	cytosol	28.41	28.93
OQU79118	Sorghum	plastid	15.66	28.81
TraesCS5B01G373100.1	Wheat	nucleus	32.21	28.8
Zm00001d023648_P003	Maize	plastid	30.2	28.48
TraesCS1A01G147200.1	Wheat	plastid	30.2	28.18
Bra034886.1-P	Field mustard	cytosol	8.05	28.12
KXG28744	Sorghum	cytosol	27.74	27.37
TraesCS5A01G370700.1	Wheat	nucleus	20.36	27.33
Zm00001d007503_P001	Maize	nucleus	27.07	26.54
Os12t0488700-00	Rice	cytosol	29.98	26.43
HORVU4Hr1G041430.2	Barley	cytosol	24.83	26.24
HORVU0Hr1G000300.2	Barley	cytosol	23.27	23.69
HORVU5Hr1G092270.4	Barley	cytosol, plastid	21.25	22.95
Bra006798.1-P	Field mustard	nucleus	14.32	20.91
Bra039233.1-P	Field mustard	nucleus	14.54	19.94
Bra002694.1-P	Field mustard	nucleus	16.11	19.57
Bra002693.1-P	Field mustard	nucleus	16.11	19.57
Bra032692.1-P	Field mustard	extracellular, plasma membrane	11.19	19.16
Bra020409.1-P	Field mustard	nucleus	13.42	18.87
Bra006800.1-P	Field mustard	cytosol	6.26	17.28
Bra011226.1-P	Field mustard	cytosol	12.3	16.72
Bra015360.1-P	Field mustard	endoplasmic reticulum, extracellular	15.66	13.41
Bra032725.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	15.21	12.32
Bra003783.1-P	Field mustard	extracellular, plasma membrane	12.53	11.81
Bra025705.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	13.65	11.78
Bra008601.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	17.9	11.59
Bra031059.1-P	Field mustard	endoplasmic reticulum, vacuole	13.2	11.55
Bra015891.1-P	Field mustard	endoplasmic reticulum, golgi	13.2	10.87
Bra016190.1-P	Field mustard	mitochondrion	17.67	9.07
Bra018297.1-P	Field mustard	endoplasmic reticulum, extracellular	10.51	6.86
Bra021657.1-P	Field mustard	endoplasmic reticulum	10.51	6.33
Bra018599.1-P	Field mustard	extracellular, vacuole	12.98	6.05
Bra030742.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid, vacuole	12.75	4.95

Protein Annotations

EnsemblPlants:Bra034805.1	EnsemblPlants:Bra034805.1-P	EnsemblPlantsGene:Bra034805	InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil
PANTHER:PTHR31422	PANTHER:PTHR31422:SF0	PFAM:PF04576	PFscan:PS51775	UniParc:UPI0002547556	UniProt:M4F159
MapMan:35.1	:	:	:	:	:

Description

AT5G06560 (E=7e-072) | unknown protein

Coordinates

chrA05:+:21503682..21505547

Molecular Weight (calculated)

50905.2 Da

IEP (calculated)

5.432

GRAVY (calculated)

-0.782

Length

447 amino acids

Sequence
(BLAST)

001: MESPSTKDLI QCCDCGCHSS PRSFHRSVKR RHDELLDHDE SNNPKVHIEN ECELLRETVT SQQQSIQELY EELEKERNAA ASAADESMNV MQRLQNEKAE
101: LQMELRQYKL YVGEKMEHDL QEMVALEELV NQREQTIMAL TCEAQAYKHR MMSYGLTEGE AEGDKSGYNS SDGYDDLTAY EYPPLKCNVV ENHDPLGGDV
201: YVADDGKYPP VVSPLKSLDQ RISEMETNPG FAELDGGFSG GVKEKMVVGG QSPRPQRHFR RMSTKEVRPD AYVESPKKVA NVSSYTENVN AKDDSSDIGD
301: DRVYTIDSVT EQKVEAETSD GMDLGDPDIT KLYMRLQALE ADRESMKQAL VSMRTEKAQM VLLKEIAQHL SKEVVPQRRL PLRKASTGGP LPFTPVFKWI
401: SSFVSWRRKA RRSKYMYGMS ANNMGLQMLL EKVPRSRKWR CLRSTQV

Best Arabidopsis Sequence Match ( AT3G11850.2 )
(BLAST)

001: MESPIKCCDC GCDCCSSSPG SWIRSVKKRR HDELQTEKRF SIPELDDLDM FSNPRVQIEN ECELLRETVS NQQQTIQDLY HELEQERIAS STAADETVKM
101: IQTLEREKAK IDLELKQLQR SVDETLNYEN QEIEALENMV YQRDQTIQAL TFETQAYKHR MMSFGLTEAE ADGERSLLSR NPSMIDFSSE YDCPTQDYPP
201: LKCNINENQD PLEADIYVAD DENYPPADSP HGRVHLKTLD RRLSQMETNP SFTQLNRGRD VSEKGMVGES PRRQRHFRRI SPTGSSSSHL GASKELRPDV
301: FVDSPRSQSY SSKKMEDVSY TENNNAKDDL SEIGDDMSDR VYTIDSVHHS SVAHSGGVAE QKIEDGASDG NVVFPREHTD LGDPDITKLY MRLQALEADR
401: ESMKHALLSM RTEKAQMVLL KEIAQHLSKE VVPQRRLPLR KASIAGPLTF TPVFKWITSF VSWKRKARRS KYMYGMSGNN IGLQMLLEKV PRSRKWRCLR
501: STQV

Arabidopsis Description

F26K24.14 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF14]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.