Factsheet for GSMUA_Achr4P22730_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P12800_001	Banana	cytosol, nucleus, plasma membrane	57.65	61.11
GSMUA_Achr8P26680_001	Banana	cytosol	28.72	45.21
GSMUA_Achr1P14210_001	Banana	cytosol	32.49	43.42
GSMUA_Achr8P04680_001	Banana	cytosol, mitochondrion	33.96	43.2
Bra009206.1-P	Field mustard	nucleus	37.74	42.15
Bra028728.1-P	Field mustard	nucleus	35.85	42.01
Solyc11g045480.1.1	Tomato	mitochondrion	17.61	41.38
KRH71751	Soybean	nucleus	42.35	41.22
KRH32933	Soybean	nucleus	42.14	41.02
CDY07525	Canola	peroxisome	8.18	40.62
GSMUA_Achr3P15020_001	Banana	nucleus	37.53	39.69
PGSC0003DMT400022326	Potato	nucleus	40.67	39.11
VIT_08s0032g00720.t01	Wine grape	plastid	42.56	39.04
KRH68055	Soybean	cytosol	37.95	38.68
PGSC0003DMT400072288	Potato	plastid	40.88	37.79
Bra034805.1-P	Field mustard	nucleus	34.8	37.14
AT5G06560.1	Thale cress	nucleus	40.04	36.87
AT3G11850.2	Thale cress	nucleus	34.17	32.34
Bra038684.1-P	Field mustard	nucleus	27.25	32.26
KRG96316	Soybean	cytosol	35.43	29.14
CDY07526	Canola	nucleus	17.4	28.82
GSMUA_Achr10P...	Banana	nucleus	17.82	17.63
GSMUA_Achr6P06580_001	Banana	nucleus	10.48	16.72
GSMUA_Achr1P05380_001	Banana	golgi, plasma membrane	15.3	12.44
GSMUA_AchrUn_...	Banana	golgi, vacuole	15.09	11.29
GSMUA_Achr4P17820_001	Banana	golgi	16.35	10.58
GSMUA_Achr3P17210_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	13.42	10.47
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	15.72	9.48
GSMUA_Achr7P01610_001	Banana	golgi, mitochondrion	15.3	9.17
GSMUA_Achr6P17030_001	Banana	endoplasmic reticulum, golgi	16.98	8.86
GSMUA_Achr6P07650_001	Banana	golgi, plasma membrane	16.56	8.4

Protein Annotations

EnsemblPlants:GSMUA_Achr4P22730_001	EnsemblPlants:GSMUA_Achr4T22730_001	EnsemblPlantsGene:GSMUA_Achr4G22730_001	InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil
PANTHER:PTHR31422	PANTHER:PTHR31422:SF0	PFAM:PF04576	PFscan:PS51775	SEG:seg	UniParc:UPI00029690A3
UniProt:M0SR85	MapMan:35.1	:	:	:	:

Description

Putative DUF593 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G22730_001]

Coordinates

chr4:+:23018792..23023800

Molecular Weight (calculated)

52996.7 Da

IEP (calculated)

4.910

GRAVY (calculated)

-0.496

Length

477 amino acids

Sequence
(BLAST)

001: MDLDTLSPPG PSSSSSFSAA AAGRLCPCAC PFCCRPSSPS WRRSMKRRLD PDAADHGPAR VEVEDEVAAL REAVASQQET IQELCAELDE ERNAACSAAS
101: EAMSMILRLQ REKAEAQMEA RQFKRFAEEK MDHDQQELIA LEDLLFKREE AVQSLTFQIQ AYRHRLLGYG IDPGAVDVAP SGGSVNDEPE TPQSNESPTF
201: EYTPLKCTLT NGALPDTSSM LEKGIIQEPP GSSSHFRRSS THSCDSVMGM TSQEPMKEGE FPASMDRPLD DSDDTDDMSD RVYTIDSVHG VPMVHSSEDG
301: MEKGKRGEID GGAEGGSPDI TNLYTRLQAL EADRESMRQA IMSMQTEKAQ LLLLRHIAQQ LHKELRSKIK FVGLDENREK EGTSKSIVLA PMVRDNGLPS
401: SVYDARVYRC LEVKRFLLSC LFQWIMSFIV WRKKASRIKY TFGSSNNVGL LLLLDNSPRI SNWSWCPCGL QVNHGLV

Best Arabidopsis Sequence Match ( AT5G06560.1 )
(BLAST)

001: MDLAIVSSPT RDVVRCCDCG CDCSLNGASP GSLLRSVKRK YEEFENEKLF HIPELELDLS SNAKVQIENE LELLRETVSS QQQSIQDLYE ELDEERNAAS
101: TAASEAMSMI LRLQRDKAEL QMELRQFKRF AEEKMEHDQQ ELLDLEDLIY KREQTIQALT FEAQAYKHRM MSFGFTEAEV ETEKNMLSRN PSMIENDYQY
201: DLPTSDYPPI KCNVNENPGP LEADIDVDDV EKYPLADSPH PLKTLERRIS QMERNPSFTQ PTGDVSGGRH YTEKNVVGQS PRHQRHFRRV STGSASSLLG
301: TTREKRLDFS NDSPRSNNGS FRKMEDPPYA AGNSFARDKG DSSEIGDNDM NDRVYTIDSV HHSVSHSGTA EQKFKNDTAD GYAMSPREIS NQPDLGDPEI
401: SKLYMRLQAL EADRESMRQA IMSMRTEKAQ MVLLKEIAQH LSKDVVPERR LPLRKTSIIG AFNFISVFKW ITSFVFWRRK ARRSKYMNGV QGNNMGLQML
501: LEKTPRIRQW RCLSSTQV

Arabidopsis Description

MYOB7Myosin-binding protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG14]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.