Factsheet for PGSC0003DMT400022326

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g045470.1.1	Tomato	cytosol	16.33	96.43
PGSC0003DMT400072288	Potato	plastid	73.19	70.35
KRH71751	Soybean	nucleus	55.44	56.12
KRH32933	Soybean	nucleus	53.43	54.08
GSMUA_Achr8P26680_001	Banana	cytosol	30.65	50.16
GSMUA_Achr1P14210_001	Banana	cytosol	33.67	46.78
GSMUA_Achr8P04680_001	Banana	cytosol, mitochondrion	34.88	46.13
GSMUA_Achr3P15020_001	Banana	nucleus	41.94	46.12
GSMUA_Achr2P12800_001	Banana	cytosol, nucleus, plasma membrane	38.51	42.44
GSMUA_Achr4P22730_001	Banana	nucleus, plastid	39.11	40.67
Zm00001d033504_P001	Maize	nucleus	33.47	33.4
TraesCS4A01G159000.1	Wheat	cytosol	29.03	32.8
Os03t0650800-00	Rice	nucleus	33.06	32.8
Zm00001d023648_P003	Maize	plastid	31.05	32.49
Zm00001d013658_P001	Maize	nucleus	32.66	32.46
OQU91257	Sorghum	nucleus	33.27	32.29
TraesCS1B01G165300.1	Wheat	plastid	31.05	32.15
OQU79118	Sorghum	plastid	15.73	32.1
TraesCS1D01G145300.1	Wheat	cytosol	24.4	31.84
TraesCS5B01G373100.1	Wheat	nucleus	32.06	31.8
TraesCS1A01G147200.1	Wheat	plastid	30.65	31.73
TraesCS5D01G380300.1	Wheat	cytosol	25.2	31.41
Os12t0488700-00	Rice	cytosol	31.45	30.77
KXG28744	Sorghum	cytosol	27.62	30.24
TraesCS5A01G370700.1	Wheat	nucleus	19.76	29.43
HORVU4Hr1G041430.2	Barley	cytosol	24.8	29.08
Zm00001d007503_P001	Maize	nucleus	26.41	28.73
HORVU0Hr1G000300.2	Barley	cytosol	23.59	26.65
HORVU5Hr1G092270.4	Barley	cytosol, plastid	20.97	25.12
PGSC0003DMT400028965	Potato	nucleus	18.95	20.75
PGSC0003DMT400023950	Potato	nucleus	18.55	20.67
PGSC0003DMT400011603	Potato	nucleus	17.74	17.25
PGSC0003DMT400020469	Potato	cytosol	21.77	15.56
PGSC0003DMT400030876	Potato	endoplasmic reticulum, extracellular	14.52	13.9
PGSC0003DMT400062848	Potato	golgi	16.33	13.52
PGSC0003DMT400083120	Potato	endoplasmic reticulum	14.52	12.04
PGSC0003DMT400075922	Potato	endoplasmic reticulum, golgi	15.93	9.21
PGSC0003DMT400070777	Potato	golgi, plasma membrane, plastid	14.92	8.59
PGSC0003DMT400080686	Potato	endoplasmic reticulum, golgi, plastid	17.74	7.65

Protein Annotations

EnsemblPlants:PGSC0003DMT400022326	EnsemblPlantsGene:PGSC0003DMG400008664	EntrezGene:102601106	InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil
PANTHER:PTHR31422	PANTHER:PTHR31422:SF0	PFAM:PF04576	PFscan:PS51775	PGSC:PGSC0003DMG400008664	RefSeq:XP_006362296.1
RefSeq:XP_006362297.1	SEG:seg	UniParc:UPI000295BD97	UniProt:M1AGJ6	MapMan:35.1	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400008664]

Coordinates

chr11:+:33081512..33085805

Molecular Weight (calculated)

56832.3 Da

IEP (calculated)

4.926

GRAVY (calculated)

-0.578

Length

496 amino acids

Sequence
(BLAST)

001: MDSESMIPST SVVKCCDCEC NCSITNSTFS GNWIRTVKRK FDEYDEIEKK FVIPGLILPQ TARIDMGNEC IALREMVCGQ QETIQELSVE LEEEREAASS
101: AANEAMSMIL RLQREKAESQ MEFRQFKMFT EEKMAHDQQE IMALEDFLYK REQVIQSLTC EVQMYKHRML SYGLLESEVE YDGEKENGHF SRNNSVGESS
201: DGRFDIPSYD YPPLKCTINE NQVNTEVDDE AVDVEKYAFG EAPRSCDHLR YLEKRINQLE TTPSSRTDGE VFNNNILEKA IVAQSPFVPN KEICSDFISG
301: SPKFNGNVRK AENSQTEEYA NLRKVDESSD VGDEMSDRVY TIDSIHQGAG YNGNSETKGS VHTPRDSLNH TDFGDPEVTK LYLRLQALEA DRESMRQAII
401: SMRTDKAQLI LLKEIAQQLC KEVSPERRTP VRKTSVIKSF SFISIFKWIM SFVLWRRKAH RCKYLFGLTA NRVGLLMLLD KGPRVGQWRC LSSTQV

Best Arabidopsis Sequence Match ( AT5G06560.1 )
(BLAST)

001: MDLAIVSSPT RDVVRCCDCG CDCSLNGASP GSLLRSVKRK YEEFENEKLF HIPELELDLS SNAKVQIENE LELLRETVSS QQQSIQDLYE ELDEERNAAS
101: TAASEAMSMI LRLQRDKAEL QMELRQFKRF AEEKMEHDQQ ELLDLEDLIY KREQTIQALT FEAQAYKHRM MSFGFTEAEV ETEKNMLSRN PSMIENDYQY
201: DLPTSDYPPI KCNVNENPGP LEADIDVDDV EKYPLADSPH PLKTLERRIS QMERNPSFTQ PTGDVSGGRH YTEKNVVGQS PRHQRHFRRV STGSASSLLG
301: TTREKRLDFS NDSPRSNNGS FRKMEDPPYA AGNSFARDKG DSSEIGDNDM NDRVYTIDSV HHSVSHSGTA EQKFKNDTAD GYAMSPREIS NQPDLGDPEI
401: SKLYMRLQAL EADRESMRQA IMSMRTEKAQ MVLLKEIAQH LSKDVVPERR LPLRKTSIIG AFNFISVFKW ITSFVFWRRK ARRSKYMNGV QGNNMGLQML
501: LEKTPRIRQW RCLSSTQV

Arabidopsis Description

MYOB7Myosin-binding protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG14]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.