Factsheet for TraesCS5D01G380300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G373100.1	Wheat	nucleus	95.73	76.2
HORVU5Hr1G092270.4	Barley	cytosol, plastid	78.39	75.36
Zm00001d013658_P001	Maize	nucleus	66.58	53.11
Os03t0650800-00	Rice	nucleus	66.33	52.8
OQU91257	Sorghum	nucleus	67.09	52.25
Zm00001d033504_P001	Maize	nucleus	63.32	50.7
GSMUA_Achr8P26680_001	Banana	cytosol	29.65	38.94
Solyc11g045480.1.1	Tomato	mitochondrion	18.84	36.95
CDY07525	Canola	peroxisome	8.79	36.46
GSMUA_Achr1P14210_001	Banana	cytosol	31.41	35.01
TraesCS1D01G145300.1	Wheat	cytosol	27.89	29.21
GSMUA_Achr8P04680_001	Banana	cytosol, mitochondrion	26.63	28.27
Bra028728.1-P	Field mustard	nucleus	28.89	28.26
GSMUA_Achr3P15020_001	Banana	nucleus	31.91	28.16
Bra009206.1-P	Field mustard	nucleus	29.4	27.4
Bra034805.1-P	Field mustard	nucleus	29.65	26.4
KRH71751	Soybean	nucleus	32.41	26.33
Bra038684.1-P	Field mustard	nucleus	26.63	26.3
KRH32933	Soybean	nucleus	31.66	25.71
VIT_08s0032g00720.t01	Wine grape	plastid	33.42	25.58
KRH68055	Soybean	cytosol	29.65	25.21
PGSC0003DMT400022326	Potato	nucleus	31.41	25.2
PGSC0003DMT400072288	Potato	plastid	31.16	24.03
AT5G06560.1	Thale cress	nucleus	31.16	23.94
AT3G11850.2	Thale cress	nucleus	28.89	22.82
KRG96316	Soybean	cytosol	27.14	18.62
CDY07526	Canola	nucleus	10.05	13.89
TraesCS5D01G410200.1	Wheat	nucleus	12.31	12.93
TraesCS2D01G272500.1	Wheat	plastid	13.82	11.34
TraesCS7D01G282800.1	Wheat	nucleus	11.31	10.32
TraesCS1D01G135800.1	Wheat	cytosol, golgi, mitochondrion, plastid	10.55	6.74
TraesCS5D01G451800.1	Wheat	endoplasmic reticulum	10.55	6.51
TraesCS4D01G218100.3	Wheat	mitochondrion	13.57	6.41
TraesCS4D01G278300.1	Wheat	golgi, vacuole	10.55	5.58
TraesCS4D01G041500.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	12.31	5.44
TraesCS3D01G309900.1	Wheat	golgi	10.05	4.6

Protein Annotations

EnsemblPlants:TraesCS5D01G380300.1	EnsemblPlantsGene:TraesCS5D01G380300	InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil	PANTHER:PTHR31422
PANTHER:PTHR31422:SF16	PFAM:PF04576	PFscan:PS51775	SEG:seg	MapMan:35.1	:

Description

No Description!

Coordinates

chr5D:-:450689657..450692521

Molecular Weight (calculated)

44234.0 Da

IEP (calculated)

4.512

GRAVY (calculated)

-0.609

Length

398 amino acids

Sequence
(BLAST)

001: MAMMLRLQRE KAEVQMELRQ FRRFADEKMA LDAAEIDHLR GLVARRARHL ARVRSRLHAY QQTCLRLGIP LPDADDEAEG RGRGRGDGGD GFLEGEGEGE
101: DGDYYPELRC YNGEYYYDDG LEGSEEDAVG ADLERRICLL EHGQDGDILG QPSLEEEEDE GAHLYADEAL LQPAGQETSG FSADEVLHEE TVEHCDDDDE
201: LPESPIAGYG VEEGGSDDDD SGSGSDRVYM IDKVHQGAAA PTARVLDKYE DEALEPDIKT LYMRLEALEA DRESMRQALL GMRTEKAQLM LLREIAQQLA
301: KDAAPVGTGA GFVPVAHHLP RKQAVGVADT TVREDKKTAL AGTFSKPVLF KWAIALFCSW KKKPSQSRYT FGLSSNNVGL LILLDKCPRI QKTLMRRK

Best Arabidopsis Sequence Match ( AT5G06560.1 )
(BLAST)

001: MDLAIVSSPT RDVVRCCDCG CDCSLNGASP GSLLRSVKRK YEEFENEKLF HIPELELDLS SNAKVQIENE LELLRETVSS QQQSIQDLYE ELDEERNAAS
101: TAASEAMSMI LRLQRDKAEL QMELRQFKRF AEEKMEHDQQ ELLDLEDLIY KREQTIQALT FEAQAYKHRM MSFGFTEAEV ETEKNMLSRN PSMIENDYQY
201: DLPTSDYPPI KCNVNENPGP LEADIDVDDV EKYPLADSPH PLKTLERRIS QMERNPSFTQ PTGDVSGGRH YTEKNVVGQS PRHQRHFRRV STGSASSLLG
301: TTREKRLDFS NDSPRSNNGS FRKMEDPPYA AGNSFARDKG DSSEIGDNDM NDRVYTIDSV HHSVSHSGTA EQKFKNDTAD GYAMSPREIS NQPDLGDPEI
401: SKLYMRLQAL EADRESMRQA IMSMRTEKAQ MVLLKEIAQH LSKDVVPERR LPLRKTSIIG AFNFISVFKW ITSFVFWRRK ARRSKYMNGV QGNNMGLQML
501: LEKTPRIRQW RCLSSTQV

Arabidopsis Description

MYOB7Myosin-binding protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG14]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.