Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G380300.1 | Wheat | cytosol | 76.2 | 95.73 |
| TraesCS5A01G370700.1 | Wheat | nucleus | 61.6 | 92.49 |
| HORVU5Hr1G092270.4 | Barley | cytosol, plastid | 66.2 | 79.95 |
| Os03t0650800-00 | Rice | nucleus | 67.0 | 67.0 |
| OQU91257 | Sorghum | nucleus | 66.0 | 64.58 |
| Zm00001d013658_P001 | Maize | nucleus | 63.6 | 63.73 |
| Zm00001d033504_P001 | Maize | nucleus | 63.2 | 63.58 |
| GSMUA_Achr8P26680_001 | Banana | cytosol | 23.2 | 38.28 |
| GSMUA_Achr8P04680_001 | Banana | cytosol, mitochondrion | 28.0 | 37.33 |
| Solyc11g045480.1.1 | Tomato | mitochondrion | 14.8 | 36.45 |
| GSMUA_Achr3P15020_001 | Banana | nucleus | 32.4 | 35.92 |
| CDY07525 | Canola | peroxisome | 6.8 | 35.42 |
| GSMUA_Achr1P14210_001 | Banana | cytosol | 25.0 | 35.01 |
| Bra009206.1-P | Field mustard | nucleus | 29.2 | 34.19 |
| Bra028728.1-P | Field mustard | nucleus | 27.6 | 33.91 |
| VIT_08s0032g00720.t01 | Wine grape | plastid | 34.8 | 33.46 |
| KRH68055 | Soybean | cytosol | 31.0 | 33.12 |
| KRH71751 | Soybean | nucleus | 32.4 | 33.06 |
| KRH32933 | Soybean | nucleus | 31.8 | 32.45 |
| Bra034805.1-P | Field mustard | nucleus | 28.8 | 32.21 |
| PGSC0003DMT400022326 | Potato | nucleus | 31.8 | 32.06 |
| PGSC0003DMT400072288 | Potato | plastid | 32.2 | 31.2 |
| Bra038684.1-P | Field mustard | nucleus | 25.0 | 31.02 |
| TraesCS1B01G165300.1 | Wheat | plastid | 29.0 | 30.27 |
| AT5G06560.1 | Thale cress | nucleus | 31.2 | 30.12 |
| AT3G11850.2 | Thale cress | nucleus | 28.6 | 28.37 |
| KRG96316 | Soybean | cytosol | 28.8 | 24.83 |
| CDY07526 | Canola | nucleus | 14.0 | 24.31 |
| TraesCS5B01G405000.1 | Wheat | nucleus | 13.8 | 18.3 |
| TraesCS2B01G291300.1 | Wheat | plastid | 14.8 | 15.26 |
| TraesCS7B01G199800.1 | Wheat | nucleus | 12.8 | 14.45 |
| TraesCS1B01G153100.1 | Wheat | cytosol, golgi, mitochondrion, plastid | 12.8 | 10.27 |
| TraesCS5B01G448800.1 | Wheat | mitochondrion | 13.0 | 9.97 |
| TraesCS4B01G217800.2 | Wheat | mitochondrion | 16.4 | 9.7 |
| TraesCS4B01G279900.1 | Wheat | golgi, vacuole | 13.4 | 8.42 |
| TraesCS4B01G044000.1 | Wheat | plastid | 14.2 | 7.89 |
| TraesCS3B01G343400.3 | Wheat | golgi, mitochondrion | 13.0 | 7.39 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G373100.1 | EnsemblPlantsGene:TraesCS5B01G373100 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil | PANTHER:PTHR31422 |
| PANTHER:PTHR31422:SF16 | PFAM:PF04576 | PFscan:PS51775 | SEG:seg | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr5B:-:550849323..550852447
Molecular Weight (calculated)
54507.5 Da
IEP (calculated)
4.446
GRAVY (calculated)
-0.660
Length
500 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDDDHDPDS PPRPCCSSPS AAVRWRRSVK RKLGEETRGG GGGGDGEGEE GAGARVEAEE ETAALREALA AAQATAAALR GEVEEERLAA ASAASEAMAM
101: MLRLQREKAE VQMELRQFRR FADEKMALDA AEIDHLRGLV ARRARHLARA RSRLHAYQQT CLRLGIPLPD ADDEAEAEGR GRGDGGDGFL EGDGDGEGED
201: GDYYPELRCY NGEYYYDDGL EGSEEDAVGA DLERRICLLE HGQDGDVLGQ PSLEEEEDEG AHLYADEALL EPAGQETSGF SADEVLHEET VEERSHPCDD
301: DELPESPIAG YGVEEGGSDD DGSGSGSDRV YMIDKVHQGA AAPTARVLDK YEAEALEPDI KTLYMRLEAL EADRESMRQA LLGMRTEKAQ LMLLREIAQQ
401: LAKDAAPVGT GVGFVPAVRH LPRKQAVGVA DTTVREDKKT APAGTFSKPL LFKWAIALFC SRKKKPSQSR YTFGLSSNNV GLLILLDKCP RIQKTLMRRK
101: MLRLQREKAE VQMELRQFRR FADEKMALDA AEIDHLRGLV ARRARHLARA RSRLHAYQQT CLRLGIPLPD ADDEAEAEGR GRGDGGDGFL EGDGDGEGED
201: GDYYPELRCY NGEYYYDDGL EGSEEDAVGA DLERRICLLE HGQDGDVLGQ PSLEEEEDEG AHLYADEALL EPAGQETSGF SADEVLHEET VEERSHPCDD
301: DELPESPIAG YGVEEGGSDD DGSGSGSDRV YMIDKVHQGA AAPTARVLDK YEAEALEPDI KTLYMRLEAL EADRESMRQA LLGMRTEKAQ LMLLREIAQQ
401: LAKDAAPVGT GVGFVPAVRH LPRKQAVGVA DTTVREDKKT APAGTFSKPL LFKWAIALFC SRKKKPSQSR YTFGLSSNNV GLLILLDKCP RIQKTLMRRK
001: MESPIKCCDC GCDCCSSSPG SWIRSVKKRR HDELQTEKRF SIPELDDLDM FSNPRVQIEN ECELLRETVS NQQQTIQDLY HELEQERIAS STAADETVKM
101: IQTLEREKAK IDLELKQLQR SVDETLNYEN QEIEALENMV YQRDQTIQAL TFETQAYKHR MMSFGLTEAE ADGERSLLSR NPSMIDFSSE YDCPTQDYPP
201: LKCNINENQD PLEADIYVAD DENYPPADSP HGRVHLKTLD RRLSQMETNP SFTQLNRGRD VSEKGMVGES PRRQRHFRRI SPTGSSSSHL GASKELRPDV
301: FVDSPRSQSY SSKKMEDVSY TENNNAKDDL SEIGDDMSDR VYTIDSVHHS SVAHSGGVAE QKIEDGASDG NVVFPREHTD LGDPDITKLY MRLQALEADR
401: ESMKHALLSM RTEKAQMVLL KEIAQHLSKE VVPQRRLPLR KASIAGPLTF TPVFKWITSF VSWKRKARRS KYMYGMSGNN IGLQMLLEKV PRSRKWRCLR
501: STQV
101: IQTLEREKAK IDLELKQLQR SVDETLNYEN QEIEALENMV YQRDQTIQAL TFETQAYKHR MMSFGLTEAE ADGERSLLSR NPSMIDFSSE YDCPTQDYPP
201: LKCNINENQD PLEADIYVAD DENYPPADSP HGRVHLKTLD RRLSQMETNP SFTQLNRGRD VSEKGMVGES PRRQRHFRRI SPTGSSSSHL GASKELRPDV
301: FVDSPRSQSY SSKKMEDVSY TENNNAKDDL SEIGDDMSDR VYTIDSVHHS SVAHSGGVAE QKIEDGASDG NVVFPREHTD LGDPDITKLY MRLQALEADR
401: ESMKHALLSM RTEKAQMVLL KEIAQHLSKE VVPQRRLPLR KASIAGPLTF TPVFKWITSF VSWKRKARRS KYMYGMSGNN IGLQMLLEKV PRSRKWRCLR
501: STQV
Arabidopsis Description
F26K24.14 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF14]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.