Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G285400.1 | Wheat | nucleus | 98.42 | 98.42 |
| TraesCS7D01G282800.1 | Wheat | nucleus | 96.84 | 98.39 |
| Os08t0442350-01 | Rice | nucleus | 60.5 | 53.82 |
| OQU80548 | Sorghum | nucleus | 58.47 | 49.05 |
| Zm00001d032145_P001 | Maize | nucleus | 48.98 | 35.06 |
| CDX68698 | Canola | cytosol | 16.25 | 24.49 |
| CDY28219 | Canola | cytosol | 16.03 | 24.15 |
| Bra006798.1-P | Field mustard | nucleus | 15.8 | 22.88 |
| Bra002693.1-P | Field mustard | nucleus | 18.96 | 22.83 |
| Bra002694.1-P | Field mustard | nucleus | 18.96 | 22.83 |
| CDY51277 | Canola | nucleus | 18.96 | 22.83 |
| CDY34794 | Canola | nucleus | 16.7 | 22.7 |
| CDX76832 | Canola | nucleus | 16.48 | 22.67 |
| AT4G30830.1 | Thale cress | nucleus | 18.51 | 22.59 |
| CDY50792 | Canola | nucleus | 18.74 | 22.55 |
| CDY02772 | Canola | nucleus | 18.51 | 22.4 |
| KRH72337 | Soybean | nucleus | 23.48 | 22.17 |
| Bra039233.1-P | Field mustard | nucleus | 16.25 | 22.09 |
| VIT_11s0037g00610.t01 | Wine grape | nucleus | 23.25 | 21.96 |
| CDY32744 | Canola | nucleus | 18.06 | 21.86 |
| KRH03013 | Soybean | nucleus | 23.25 | 21.73 |
| AT5G57830.1 | Thale cress | nucleus | 18.74 | 21.45 |
| Bra020409.1-P | Field mustard | nucleus | 15.35 | 21.38 |
| CDX88641 | Canola | nucleus | 5.87 | 21.31 |
| KRH55008 | Soybean | cytosol | 7.67 | 21.12 |
| Bra011226.1-P | Field mustard | cytosol | 15.58 | 20.97 |
| PGSC0003DMT400023950 | Potato | nucleus | 20.54 | 20.45 |
| AT2G24140.2 | Thale cress | nucleus | 14.9 | 20.37 |
| Solyc07g005910.2.1 | Tomato | nucleus | 20.77 | 20.31 |
| CDX72271 | Canola | nucleus | 17.38 | 19.95 |
| KRH37764 | Soybean | nucleus | 20.32 | 19.65 |
| PGSC0003DMT400028965 | Potato | nucleus | 20.09 | 19.65 |
| CDX88643 | Canola | nucleus | 10.38 | 19.33 |
| CDY11846 | Canola | nucleus | 10.38 | 19.33 |
| KRH12784 | Soybean | nucleus | 19.86 | 19.3 |
| TraesCS5B01G405000.1 | Wheat | nucleus | 16.25 | 19.1 |
| KRH63109 | Soybean | nucleus | 19.64 | 18.87 |
| GSMUA_Achr10P... | Banana | nucleus | 20.09 | 18.46 |
| CDY13389 | Canola | nucleus | 16.7 | 18.41 |
| Bra006800.1-P | Field mustard | cytosol | 6.55 | 17.9 |
| Solyc11g020850.1.1 | Tomato | nucleus | 19.86 | 16.76 |
| TraesCS1B01G165300.1 | Wheat | plastid | 14.67 | 13.57 |
| TraesCS5B01G373100.1 | Wheat | nucleus | 14.45 | 12.8 |
| Solyc12g009900.1.1 | Tomato | cytosol | 16.48 | 11.46 |
| PGSC0003DMT400020469 | Potato | cytosol | 16.7 | 10.66 |
| TraesCS2B01G291300.1 | Wheat | plastid | 10.84 | 9.9 |
| TraesCS1B01G153100.1 | Wheat | cytosol, golgi, mitochondrion, plastid | 11.96 | 8.51 |
| TraesCS5B01G448800.1 | Wheat | mitochondrion | 10.84 | 7.36 |
| TraesCS4B01G217800.2 | Wheat | mitochondrion | 13.32 | 6.98 |
| TraesCS4B01G279900.1 | Wheat | golgi, vacuole | 11.96 | 6.66 |
| CDY31127 | Canola | cytosol | 9.71 | 6.62 |
| TraesCS3B01G343400.3 | Wheat | golgi, mitochondrion | 12.64 | 6.37 |
| TraesCS4B01G044000.1 | Wheat | plastid | 11.06 | 5.44 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G199800.1 | EnsemblPlantsGene:TraesCS7B01G199800 | InterPro:GTD-bd | InterPro:IPR007656 | PANTHER:PTHR31422 | PANTHER:PTHR31422:SF1 |
| PFAM:PF04576 | PFscan:PS51775 | SEG:seg | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr7B:-:361567895..361573198
Molecular Weight (calculated)
49766.9 Da
IEP (calculated)
6.724
GRAVY (calculated)
-0.718
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPFTKLAEN ETAQLQRAVF AQYIMMKKLF MELEEEREAS SSAASAALSM IRKLQKEKEA ERMEACQYRR MAEERMNHSD KALEVVKEVM QHKELEIYYL
101: RSQLQVYKQR LLGVGIDDCD IADETITKNI PLFGSRDVEN LCYTIKRNFS LPTFQLSKRF AEMDMNKNNG SVASGRSRLG VYMHNSSENE LEQVSSDLKA
201: IGSKESLAAD MDSTEKHGEE PKPPSNSGTE HSCPSEGSSR SSPFLMAGHH TDICSQRATP VGKDVQDTLH PDPLGSLRPD NEMDNTVAHH IGHADTLKHP
301: ELSKAPAEYS CTPTKHSIST KESETPHAVA LRDKGSYVLS KFSATRKVGS MNNVDRHVRV AAASSTPRAG VERTRSRLKR VQSEKMIELN DPKKNKEQII
401: MLKEVYEQLN MIEAHMRPSA SQETPRNDQS LDSVMEAALS FSI
101: RSQLQVYKQR LLGVGIDDCD IADETITKNI PLFGSRDVEN LCYTIKRNFS LPTFQLSKRF AEMDMNKNNG SVASGRSRLG VYMHNSSENE LEQVSSDLKA
201: IGSKESLAAD MDSTEKHGEE PKPPSNSGTE HSCPSEGSSR SSPFLMAGHH TDICSQRATP VGKDVQDTLH PDPLGSLRPD NEMDNTVAHH IGHADTLKHP
301: ELSKAPAEYS CTPTKHSIST KESETPHAVA LRDKGSYVLS KFSATRKVGS MNNVDRHVRV AAASSTPRAG VERTRSRLKR VQSEKMIELN DPKKNKEQII
401: MLKEVYEQLN MIEAHMRPSA SQETPRNDQS LDSVMEAALS FSI
001: MMLLRGSSDS SSSNAKILVE NECAALLEAL SSQRETVKDL HLELEEERNA AASAANETMS MILRLQREKA EIQMEARQFK MFAQEKMTHD QEKLSVLENL
101: LYEKEQAIEA LTYEVEAYKH RLLSYGVSEA EIHDQILGFG RDSSTVGFDV YPCEYTSLEC SVDENPSGPD GNFEIEEKVM VGQSPRWPYY DPNSPLGTAK
201: DIKGASFADS PMSSSSDRVY TIDSIHVGVS EVKIDDEPNK MSKGKLNGDH WNSPRYQEPF TTQQGVNEPD IEKLYTRLQA LEADRESLRQ IIVSMRTDKA
301: QLVLLKEIAQ HLTKETGATS RRNPVSKMPS LKVFSVVTVF KWIVSFVSWK RKARQNKYVY ELSANNMGML MILGEGSGTR RWRCLTSSHV
101: LYEKEQAIEA LTYEVEAYKH RLLSYGVSEA EIHDQILGFG RDSSTVGFDV YPCEYTSLEC SVDENPSGPD GNFEIEEKVM VGQSPRWPYY DPNSPLGTAK
201: DIKGASFADS PMSSSSDRVY TIDSIHVGVS EVKIDDEPNK MSKGKLNGDH WNSPRYQEPF TTQQGVNEPD IEKLYTRLQA LEADRESLRQ IIVSMRTDKA
301: QLVLLKEIAQ HLTKETGATS RRNPVSKMPS LKVFSVVTVF KWIVSFVSWK RKARQNKYVY ELSANNMGML MILGEGSGTR RWRCLTSSHV
Arabidopsis Description
Uncharacterized protein T5N23_100 [Source:UniProtKB/TrEMBL;Acc:Q9M1S6]
SUBAcon: [peroxisome,plastid,nucleus]
SUBAcon: [peroxisome,plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.