Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G410200.1 | Wheat | nucleus | 96.02 | 95.51 |
| TraesCS5A01G400200.1 | Wheat | nucleus | 94.16 | 93.67 |
| HORVU5Hr1G097200.5 | Barley | cytosol | 92.31 | 81.31 |
| Zm00001d024102_P002 | Maize | nucleus | 51.99 | 55.37 |
| Os08t0269000-01 | Rice | cytosol, golgi, nucleus | 38.99 | 50.69 |
| OQU80230 | Sorghum | cytosol | 52.52 | 49.5 |
| CDX88641 | Canola | nucleus | 9.55 | 29.51 |
| Bra006800.1-P | Field mustard | cytosol | 10.34 | 24.07 |
| Bra020409.1-P | Field mustard | nucleus | 19.36 | 22.96 |
| Bra006798.1-P | Field mustard | nucleus | 18.3 | 22.55 |
| CDY51277 | Canola | nucleus | 21.49 | 22.01 |
| Bra002693.1-P | Field mustard | nucleus | 21.49 | 22.01 |
| CDY50792 | Canola | nucleus | 21.22 | 21.74 |
| Bra002694.1-P | Field mustard | nucleus | 20.95 | 21.47 |
| CDX88643 | Canola | nucleus | 13.53 | 21.43 |
| CDY34794 | Canola | nucleus | 18.3 | 21.17 |
| VIT_11s0037g00610.t01 | Wine grape | nucleus | 26.26 | 21.11 |
| CDX68698 | Canola | cytosol | 16.45 | 21.09 |
| CDY28219 | Canola | cytosol | 16.45 | 21.09 |
| AT5G57830.1 | Thale cress | nucleus | 21.49 | 20.93 |
| CDX76832 | Canola | nucleus | 17.77 | 20.81 |
| CDY11846 | Canola | nucleus | 13.0 | 20.59 |
| CDY02772 | Canola | nucleus | 19.89 | 20.49 |
| CDY32744 | Canola | nucleus | 19.89 | 20.49 |
| KRH72337 | Soybean | nucleus | 25.46 | 20.47 |
| KRH03013 | Soybean | nucleus | 25.46 | 20.25 |
| Bra039233.1-P | Field mustard | nucleus | 17.51 | 20.25 |
| AT2G24140.2 | Thale cress | nucleus | 17.24 | 20.06 |
| KRH37764 | Soybean | nucleus | 23.61 | 19.43 |
| AT4G30830.1 | Thale cress | nucleus | 18.3 | 19.01 |
| Solyc07g005910.2.1 | Tomato | nucleus | 22.81 | 18.98 |
| KRH63109 | Soybean | nucleus | 23.08 | 18.87 |
| KRH12784 | Soybean | nucleus | 22.81 | 18.86 |
| Bra011226.1-P | Field mustard | cytosol | 16.45 | 18.84 |
| PGSC0003DMT400028965 | Potato | nucleus | 22.28 | 18.54 |
| PGSC0003DMT400023950 | Potato | nucleus | 21.49 | 18.2 |
| CDX72271 | Canola | nucleus | 17.51 | 17.1 |
| CDY13389 | Canola | nucleus | 17.77 | 16.67 |
| TraesCS1B01G165300.1 | Wheat | plastid | 20.69 | 16.28 |
| TraesCS7B01G199800.1 | Wheat | nucleus | 19.1 | 16.25 |
| KRH55008 | Soybean | cytosol | 6.9 | 16.15 |
| Solyc11g020850.1.1 | Tomato | nucleus | 21.22 | 15.24 |
| TraesCS5B01G373100.1 | Wheat | nucleus | 18.3 | 13.8 |
| TraesCS2B01G291300.1 | Wheat | plastid | 15.12 | 11.75 |
| Solyc12g009900.1.1 | Tomato | cytosol | 17.24 | 10.2 |
| PGSC0003DMT400020469 | Potato | cytosol | 17.51 | 9.51 |
| TraesCS1B01G153100.1 | Wheat | cytosol, golgi, mitochondrion, plastid | 12.73 | 7.7 |
| CDY31127 | Canola | cytosol | 12.2 | 7.08 |
| TraesCS4B01G217800.2 | Wheat | mitochondrion | 15.65 | 6.98 |
| TraesCS5B01G448800.1 | Wheat | mitochondrion | 11.94 | 6.9 |
| TraesCS4B01G279900.1 | Wheat | golgi, vacuole | 14.32 | 6.78 |
| TraesCS4B01G044000.1 | Wheat | plastid | 15.12 | 6.33 |
| TraesCS3B01G343400.3 | Wheat | golgi, mitochondrion | 14.32 | 6.14 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 0.27 | 0.51 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G405000.1 | EnsemblPlantsGene:TraesCS5B01G405000 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil | PANTHER:PTHR31422 |
| PANTHER:PTHR31422:SF17 | PFAM:PF04576 | PFscan:PS51775 | SEG:seg | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr5B:-:580732056..580734188
Molecular Weight (calculated)
41247.7 Da
IEP (calculated)
4.977
GRAVY (calculated)
-0.546
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGDEDEGEM EALREALRQQ SLAVEMLKAE LEEERQAASS GADEALAMIL RLQGEKAAVR MEADQFRRVA EERILHDEDS LAFLKAVVFS QEMDITSLKN
101: RLLVVCGSNG PYAPPPGRDG VIDLPWLRRL AQKDVSSGRN ASLPAARLEE LCSDLDASED VGDSRPARTL SDIGEVIRRE KEWVRSNVSH QALPPRLHRS
201: SSHCLPRAPS YTAQCGMPNV HDKFEAPESV ASHAPPRSSR RSSPEIISEE DDVISSSTRR GDCNDPKPGD ERTDGAIADL GAGIDEIKSS VQTLATELGR
301: MRETSMSRGD AQMQVLGEIC AKLDAMRPMT ISKQQNAVHG GKKHSSREVG SSSKGPVALP QSELLMNHFI EAMMYIP
101: RLLVVCGSNG PYAPPPGRDG VIDLPWLRRL AQKDVSSGRN ASLPAARLEE LCSDLDASED VGDSRPARTL SDIGEVIRRE KEWVRSNVSH QALPPRLHRS
201: SSHCLPRAPS YTAQCGMPNV HDKFEAPESV ASHAPPRSSR RSSPEIISEE DDVISSSTRR GDCNDPKPGD ERTDGAIADL GAGIDEIKSS VQTLATELGR
301: MRETSMSRGD AQMQVLGEIC AKLDAMRPMT ISKQQNAVHG GKKHSSREVG SSSKGPVALP QSELLMNHFI EAMMYIP
001: MVERSRSFRI PGAETNDLRI ALYERKEVIE RLQEELNAER EASETSANEA MSMILRLQGE KAELAMEADQ YKRMVEEQMS HAEMSFALLE DVIYQKEIEV
101: TALAYQVEVY RSQLLSLGFN DLKSLDVKLQ EDDDQDENML KMNDFSLSDR SQTPSPELVT DLSIPEEKEV IEQSLESQKS SLDVYWEQIK KLNEQVKELT
201: GFRDSMRDQH RTSVSESRGE EDFASSSNFQ EVTQERKKEA KGLSKTTDDT MMIKVSKQTK MEKKPSKQTR DRSGKRNRAE YQAELQRLRQ RVERLERGKS
301: NTEPETSGVI KQEEISLLKE VKEELSSVQS SDVKKSLNTM ENLQPWVDPT IISVQEAMLY FWL
101: TALAYQVEVY RSQLLSLGFN DLKSLDVKLQ EDDDQDENML KMNDFSLSDR SQTPSPELVT DLSIPEEKEV IEQSLESQKS SLDVYWEQIK KLNEQVKELT
201: GFRDSMRDQH RTSVSESRGE EDFASSSNFQ EVTQERKKEA KGLSKTTDDT MMIKVSKQTK MEKKPSKQTR DRSGKRNRAE YQAELQRLRQ RVERLERGKS
301: NTEPETSGVI KQEEISLLKE VKEELSSVQS SDVKKSLNTM ENLQPWVDPT IISVQEAMLY FWL
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q1PE31]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.