Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G405000.1 | Wheat | nucleus | 81.31 | 92.31 |
| TraesCS5D01G410200.1 | Wheat | nucleus | 79.91 | 90.24 |
| TraesCS5A01G400200.1 | Wheat | nucleus | 79.67 | 89.97 |
| Zm00001d024102_P002 | Maize | nucleus | 46.73 | 56.5 |
| Os08t0269000-01 | Rice | cytosol, golgi, nucleus | 35.28 | 52.07 |
| OQU80230 | Sorghum | cytosol | 47.9 | 51.25 |
| CDX88641 | Canola | nucleus | 8.18 | 28.69 |
| Bra006800.1-P | Field mustard | cytosol | 9.11 | 24.07 |
| Bra006798.1-P | Field mustard | nucleus | 15.89 | 22.22 |
| Bra020409.1-P | Field mustard | nucleus | 16.36 | 22.01 |
| Bra002694.1-P | Field mustard | nucleus | 18.46 | 21.47 |
| Bra002693.1-P | Field mustard | nucleus | 18.22 | 21.2 |
| CDY51277 | Canola | nucleus | 18.22 | 21.2 |
| CDX68698 | Canola | cytosol | 14.49 | 21.09 |
| CDY28219 | Canola | cytosol | 14.49 | 21.09 |
| CDX88643 | Canola | nucleus | 11.68 | 21.01 |
| CDY50792 | Canola | nucleus | 17.99 | 20.92 |
| VIT_11s0037g00610.t01 | Wine grape | nucleus | 22.66 | 20.68 |
| KRH72337 | Soybean | nucleus | 22.2 | 20.26 |
| Bra039233.1-P | Field mustard | nucleus | 15.42 | 20.25 |
| AT5G57830.1 | Thale cress | nucleus | 18.22 | 20.16 |
| KRH03013 | Soybean | nucleus | 22.2 | 20.04 |
| CDY34794 | Canola | nucleus | 15.19 | 19.94 |
| CDY32744 | Canola | nucleus | 16.82 | 19.67 |
| CDY02772 | Canola | nucleus | 16.82 | 19.67 |
| CDX76832 | Canola | nucleus | 14.72 | 19.57 |
| PGSC0003DMT400023950 | Potato | nucleus | 20.33 | 19.55 |
| Bra011226.1-P | Field mustard | cytosol | 14.95 | 19.45 |
| CDY11846 | Canola | nucleus | 10.75 | 19.33 |
| KRH37764 | Soybean | nucleus | 20.56 | 19.21 |
| Solyc07g005910.2.1 | Tomato | nucleus | 20.33 | 19.21 |
| PGSC0003DMT400028965 | Potato | nucleus | 20.09 | 18.98 |
| KRH63109 | Soybean | nucleus | 20.33 | 18.87 |
| AT2G24140.2 | Thale cress | nucleus | 14.25 | 18.83 |
| AT4G30830.1 | Thale cress | nucleus | 15.89 | 18.73 |
| KRH12784 | Soybean | nucleus | 19.86 | 18.64 |
| CDX72271 | Canola | nucleus | 14.95 | 16.58 |
| CDY13389 | Canola | nucleus | 15.19 | 16.17 |
| HORVU4Hr1G041430.2 | Barley | cytosol | 15.65 | 15.84 |
| Solyc11g020850.1.1 | Tomato | nucleus | 19.16 | 15.62 |
| KRH55008 | Soybean | cytosol | 5.84 | 15.53 |
| HORVU0Hr1G000300.2 | Barley | cytosol | 15.89 | 15.49 |
| HORVU2Hr1G066690.6 | Barley | cytosol, mitochondrion | 12.38 | 11.96 |
| Solyc12g009900.1.1 | Tomato | cytosol | 15.65 | 10.52 |
| PGSC0003DMT400020469 | Potato | cytosol | 15.89 | 9.8 |
| HORVU1Hr1G035080.2 | Barley | cytosol, golgi, mitochondrion, plastid | 10.98 | 7.53 |
| HORVU5Hr1G092270.4 | Barley | cytosol, plastid | 7.24 | 7.49 |
| HORVU0Hr1G033330.3 | Barley | cytosol | 13.79 | 6.97 |
| HORVU4Hr1G074110.1 | Barley | golgi | 12.38 | 6.82 |
| CDY31127 | Canola | cytosol | 10.28 | 6.77 |
| HORVU4Hr1G007120.2 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 13.79 | 6.56 |
| HORVU4Hr1G061850.1 | Barley | plastid | 14.02 | 6.44 |
| HORVU3Hr1G075790.2 | Barley | golgi, mitochondrion | 12.62 | 6.14 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 0.23 | 0.51 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G097200.5 | EnsemblPlantsGene:HORVU5Hr1G097200 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil | PANTHER:PTHR31422 |
| PANTHER:PTHR31422:SF17 | PFAM:PF04576 | PFscan:PS51775 | SEG:seg | UniParc:UPI000B464135 | UniProt:A0A287SFC4 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:603593532..603596168
Molecular Weight (calculated)
47362.8 Da
IEP (calculated)
5.261
GRAVY (calculated)
-0.422
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGDDEDDGE MEALREALRQ QSLAVEMLKA ELEEERQAAS SGADEALAMI LRLQGEKAAV RMEADQFRRV AEERILHDED SLAFLKAVVF SQEMDITSLK
101: NRLLVVCGSN GPQAPAPGRD GVIDLPWLRR LAQKDVSSGR NASLPAARLE ELCSDLDASE DVGDSRPART VSDIGEVIRR EKEWVRSNVS HHALPRLHRS
201: SSHRLPRAPS YSAQCGIPNV HDKFEAPESV ASHAPPRSSR RSSPEIISEE DDVISSSTRR GDCNDPKPSD ERANGAIADL GAGIDEIKSS VQTLATELSR
301: TRQTSMSRGD AQMQVLAEIC AKLDAMRPMS KQQNAVHGGN KHSSREVGSS SKVVVAVPQG ELLMDHFIEG NDVHTIRFVK GDALYWFWSW RIDCKIVDFV
401: CVSFPLSLFP PRRWCVHESL CDIIVVFY
101: NRLLVVCGSN GPQAPAPGRD GVIDLPWLRR LAQKDVSSGR NASLPAARLE ELCSDLDASE DVGDSRPART VSDIGEVIRR EKEWVRSNVS HHALPRLHRS
201: SSHRLPRAPS YSAQCGIPNV HDKFEAPESV ASHAPPRSSR RSSPEIISEE DDVISSSTRR GDCNDPKPSD ERANGAIADL GAGIDEIKSS VQTLATELSR
301: TRQTSMSRGD AQMQVLAEIC AKLDAMRPMS KQQNAVHGGN KHSSREVGSS SKVVVAVPQG ELLMDHFIEG NDVHTIRFVK GDALYWFWSW RIDCKIVDFV
401: CVSFPLSLFP PRRWCVHESL CDIIVVFY
001: MVERSRSFRI PGAETNDLRI ALYERKEVIE RLQEELNAER EASETSANEA MSMILRLQGE KAELAMEADQ YKRMVEEQMS HAEMSFALLE DVIYQKEIEV
101: TALAYQVEVY RSQLLSLGFN DLKSLDVKLQ EDDDQDENML KMNDFSLSDR SQTPSPELVT DLSIPEEKEV IEQSLESQKS SLDVYWEQIK KLNEQVKELT
201: GFRDSMRDQH RTSVSESRGE EDFASSSNFQ EVTQERKKEA KGLSKTTDDT MMIKVSKQTK MEKKPSKQTR DRSGKRNRAE YQAELQRLRQ RVERLERGKS
301: NTEPETSGVI KQEEISLLKE VKEELSSVQS SDVKKSLNTM ENLQPWVDPT IISVQEAMLY FWL
101: TALAYQVEVY RSQLLSLGFN DLKSLDVKLQ EDDDQDENML KMNDFSLSDR SQTPSPELVT DLSIPEEKEV IEQSLESQKS SLDVYWEQIK KLNEQVKELT
201: GFRDSMRDQH RTSVSESRGE EDFASSSNFQ EVTQERKKEA KGLSKTTDDT MMIKVSKQTK MEKKPSKQTR DRSGKRNRAE YQAELQRLRQ RVERLERGKS
301: NTEPETSGVI KQEEISLLKE VKEELSSVQS SDVKKSLNTM ENLQPWVDPT IISVQEAMLY FWL
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q1PE31]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.