Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68698 | Canola | cytosol | 90.14 | 90.14 |
| Bra011226.1-P | Field mustard | cytosol | 94.9 | 84.8 |
| AT4G30830.1 | Thale cress | nucleus | 75.85 | 61.43 |
| CDX72271 | Canola | nucleus | 78.91 | 60.1 |
| CDY13389 | Canola | nucleus | 77.55 | 56.72 |
| CDY34794 | Canola | nucleus | 53.4 | 48.16 |
| CDX76832 | Canola | nucleus | 52.04 | 47.52 |
| CDX88641 | Canola | nucleus | 11.56 | 27.87 |
| CDY50792 | Canola | nucleus | 33.67 | 26.9 |
| CDY51277 | Canola | nucleus | 33.33 | 26.63 |
| VIT_11s0037g00610.t01 | Wine grape | nucleus | 42.18 | 26.44 |
| CDY02772 | Canola | nucleus | 31.63 | 25.41 |
| CDY32744 | Canola | nucleus | 31.63 | 25.41 |
| KRH55008 | Soybean | cytosol | 13.61 | 24.84 |
| KRH37764 | Soybean | nucleus | 35.37 | 22.71 |
| Solyc07g005910.2.1 | Tomato | nucleus | 34.35 | 22.3 |
| CDY11846 | Canola | nucleus | 18.03 | 22.27 |
| CDX88643 | Canola | nucleus | 18.03 | 22.27 |
| KRH12784 | Soybean | nucleus | 34.01 | 21.93 |
| PGSC0003DMT400028965 | Potato | nucleus | 33.67 | 21.85 |
| PGSC0003DMT400023950 | Potato | nucleus | 32.65 | 21.57 |
| KRH63109 | Soybean | nucleus | 33.33 | 21.26 |
| KRH72337 | Soybean | nucleus | 33.67 | 21.11 |
| KRH03013 | Soybean | nucleus | 32.65 | 20.25 |
| Os08t0269000-01 | Rice | cytosol, golgi, nucleus | 18.03 | 18.28 |
| Solyc11g020850.1.1 | Tomato | nucleus | 32.31 | 18.1 |
| TraesCS5D01G410200.1 | Wheat | nucleus | 21.77 | 16.89 |
| TraesCS5A01G400200.1 | Wheat | nucleus | 21.43 | 16.62 |
| TraesCS5B01G405000.1 | Wheat | nucleus | 21.09 | 16.45 |
| Zm00001d024102_P002 | Maize | nucleus | 19.39 | 16.1 |
| TraesCS7D01G282800.1 | Wheat | nucleus | 23.81 | 16.05 |
| TraesCS7B01G199800.1 | Wheat | nucleus | 24.15 | 16.03 |
| TraesCS7A01G285400.1 | Wheat | nucleus | 24.15 | 16.03 |
| Os08t0442350-01 | Rice | nucleus | 26.87 | 15.86 |
| GSMUA_Achr10P... | Banana | nucleus | 25.17 | 15.35 |
| CDY14078 | Canola | nucleus | 20.07 | 15.29 |
| CDY02887 | Canola | cytosol, nucleus, peroxisome | 19.05 | 14.78 |
| CDX98935 | Canola | nucleus | 20.41 | 14.71 |
| CDY04993 | Canola | nucleus | 20.41 | 14.63 |
| CDX76130 | Canola | cytosol | 19.73 | 14.57 |
| HORVU5Hr1G097200.5 | Barley | cytosol | 21.09 | 14.49 |
| CDY47332 | Canola | extracellular, plasma membrane | 12.59 | 14.18 |
| CDY01114 | Canola | extracellular, plasma membrane | 12.59 | 14.18 |
| CDX70091 | Canola | nucleus | 20.41 | 14.05 |
| OQU80230 | Sorghum | cytosol | 19.05 | 14.0 |
| CDY67532 | Canola | nucleus | 19.73 | 13.91 |
| CDX67607 | Canola | peroxisome | 19.73 | 13.81 |
| CDX78259 | Canola | nucleus | 19.05 | 13.79 |
| OQU80548 | Sorghum | nucleus | 24.49 | 13.64 |
| CDX73453 | Canola | nucleus | 19.05 | 13.53 |
| CDY09477 | Canola | nucleus | 8.5 | 13.44 |
| CDY07526 | Canola | nucleus | 12.93 | 13.19 |
| CDY08489 | Canola | nucleus | 17.01 | 12.92 |
| CDY01064 | Canola | nucleus | 19.39 | 12.78 |
| Solyc12g009900.1.1 | Tomato | cytosol | 27.55 | 12.72 |
| CDY70407 | Canola | peroxisome | 15.31 | 12.2 |
| PGSC0003DMT400020469 | Potato | cytosol | 26.19 | 11.1 |
| Zm00001d032145_P001 | Maize | nucleus | 22.45 | 10.66 |
| CDX89779 | Canola | endoplasmic reticulum, extracellular | 16.33 | 9.21 |
| CDY01147 | Canola | extracellular, golgi, vacuole | 17.01 | 9.04 |
| CDY18267 | Canola | endoplasmic reticulum, plasma membrane | 15.99 | 9.02 |
| CDX68162 | Canola | extracellular, plasma membrane, vacuole | 14.97 | 8.92 |
| CDY68842 | Canola | vacuole | 16.67 | 8.7 |
| CDX85859 | Canola | extracellular, plasma membrane, vacuole | 14.29 | 8.52 |
| CDY21687 | Canola | endoplasmic reticulum, vacuole | 13.61 | 7.83 |
| CDX96274 | Canola | mitochondrion | 19.39 | 7.74 |
| CDY26705 | Canola | endoplasmic reticulum, plasma membrane, plastid | 13.27 | 7.53 |
| CDY19266 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 13.27 | 7.49 |
| CDX81908 | Canola | endoplasmic reticulum, vacuole | 12.59 | 7.41 |
| CDY45396 | Canola | extracellular, golgi, vacuole | 13.61 | 7.38 |
| CDY11550 | Canola | mitochondrion | 19.05 | 7.02 |
| CDX73116 | Canola | extracellular, golgi, vacuole | 12.93 | 6.9 |
| CDY31127 | Canola | cytosol | 14.63 | 6.62 |
| CDY16985 | Canola | endoplasmic reticulum, golgi | 14.63 | 6.33 |
| CDX69426 | Canola | endoplasmic reticulum, golgi, plastid | 14.63 | 6.29 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 14.63 | 6.05 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 14.63 | 5.96 |
| CDY29652 | Canola | endoplasmic reticulum | 14.29 | 5.76 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 14.29 | 5.5 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 14.97 | 4.6 |
| CDX93536 | Canola | extracellular, vacuole | 14.97 | 4.56 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 13.27 | 4.46 |
| CDY07525 | Canola | peroxisome | 1.02 | 3.12 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY28219 | EnsemblPlantsGene:GSBRNA2T00039946001 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil | PANTHER:PTHR31422 |
| PANTHER:PTHR31422:SF1 | PFAM:PF04576 | PFscan:PS51775 | ProteinID:CDY28219 | ProteinID:CDY28219.1 | SEG:seg |
| UniParc:UPI0004EDBCDA | UniProt:A0A078GSN9 | MapMan:35.2 | : | : | : |
Description
BnaA01g06300DBnaA01g06300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GSN9]
Coordinates
chrLK032216:-:337488..338457
Molecular Weight (calculated)
34409.9 Da
IEP (calculated)
4.982
GRAVY (calculated)
-0.793
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MLERSHSLRI PGAETLDLRI ALYEHKEVIE RLQDELNAER EASSTSASEA LSMILRLQGE KAELAREAAQ YKRIAQEEMS HAEMWFAHLE DFIHQKENVI
101: TALEYQVEAY RSQLLSLGYS DLNSLDVKLQ ENDVRSQIPF PELVNDLSIP VEKEVIEESL DSKKSYFDVY WDHIKKLDEK VKELKTEDAL KMKVAKQTKM
201: KKKSTKQTRD RSGKRDRAEY QSEMQRLRER VEQLEKEKTK TEPETSGVIL MEMKEEVRSV QSSEEKRSNT MENLQPWIDP AIVSVQEAML NFWL
101: TALEYQVEAY RSQLLSLGYS DLNSLDVKLQ ENDVRSQIPF PELVNDLSIP VEKEVIEESL DSKKSYFDVY WDHIKKLDEK VKELKTEDAL KMKVAKQTKM
201: KKKSTKQTRD RSGKRDRAEY QSEMQRLRER VEQLEKEKTK TEPETSGVIL MEMKEEVRSV QSSEEKRSNT MENLQPWIDP AIVSVQEAML NFWL
001: MVERSRSFRI PGAETNDLRI ALYERKEVIE RLQEELNAER EASETSANEA MSMILRLQGE KAELAMEADQ YKRMVEEQMS HAEMSFALLE DVIYQKEIEV
101: TALAYQVEVY RSQLLSLGFN DLKSLDVKLQ EDDDQDENML KMNDFSLSDR SQTPSPELVT DLSIPEEKEV IEQSLESQKS SLDVYWEQIK KLNEQVKELT
201: GFRDSMRDQH RTSVSESRGE EDFASSSNFQ EVTQERKKEA KGLSKTTDDT MMIKVSKQTK MEKKPSKQTR DRSGKRNRAE YQAELQRLRQ RVERLERGKS
301: NTEPETSGVI KQEEISLLKE VKEELSSVQS SDVKKSLNTM ENLQPWVDPT IISVQEAMLY FWL
101: TALAYQVEVY RSQLLSLGFN DLKSLDVKLQ EDDDQDENML KMNDFSLSDR SQTPSPELVT DLSIPEEKEV IEQSLESQKS SLDVYWEQIK KLNEQVKELT
201: GFRDSMRDQH RTSVSESRGE EDFASSSNFQ EVTQERKKEA KGLSKTTDDT MMIKVSKQTK MEKKPSKQTR DRSGKRNRAE YQAELQRLRQ RVERLERGKS
301: NTEPETSGVI KQEEISLLKE VKEELSSVQS SDVKKSLNTM ENLQPWVDPT IISVQEAMLY FWL
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q1PE31]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.