Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08489 | Canola | nucleus | 82.06 | 94.57 |
| CDY67532 | Canola | nucleus | 70.4 | 75.3 |
| AT3G11850.2 | Thale cress | nucleus | 70.63 | 62.5 |
| CDX98935 | Canola | nucleus | 54.71 | 59.8 |
| CDX70091 | Canola | nucleus | 56.73 | 59.25 |
| CDY07525 | Canola | peroxisome | 12.56 | 58.33 |
| CDY14078 | Canola | nucleus | 50.45 | 58.29 |
| CDY04993 | Canola | nucleus | 52.02 | 56.59 |
| VIT_08s0032g00720.t01 | Wine grape | plastid | 56.28 | 48.27 |
| KRH68055 | Soybean | cytosol | 49.78 | 47.44 |
| CDX76130 | Canola | cytosol | 39.91 | 44.72 |
| CDY02887 | Canola | cytosol, nucleus, peroxisome | 36.32 | 42.74 |
| CDY70407 | Canola | peroxisome | 34.98 | 42.28 |
| CDX78259 | Canola | nucleus | 38.12 | 41.87 |
| CDX73453 | Canola | nucleus | 38.56 | 41.55 |
| CDX67607 | Canola | peroxisome | 38.79 | 41.19 |
| KRG96316 | Soybean | cytosol | 46.41 | 35.69 |
| CDY07526 | Canola | nucleus | 21.3 | 32.99 |
| CDX68698 | Canola | cytosol | 13.23 | 20.07 |
| CDX88641 | Canola | nucleus | 5.38 | 19.67 |
| CDY50792 | Canola | nucleus | 16.14 | 19.57 |
| CDY28219 | Canola | cytosol | 12.78 | 19.39 |
| CDY34794 | Canola | nucleus | 14.13 | 19.33 |
| CDY51277 | Canola | nucleus | 15.92 | 19.29 |
| CDX76832 | Canola | nucleus | 13.9 | 19.25 |
| CDY01114 | Canola | extracellular, plasma membrane | 11.21 | 19.16 |
| CDY47332 | Canola | extracellular, plasma membrane | 11.21 | 19.16 |
| CDY02772 | Canola | nucleus | 15.7 | 19.13 |
| CDX88643 | Canola | nucleus | 10.09 | 18.91 |
| CDY32744 | Canola | nucleus | 15.25 | 18.58 |
| CDY11846 | Canola | nucleus | 9.42 | 17.65 |
| CDX72271 | Canola | nucleus | 14.57 | 16.84 |
| CDY09477 | Canola | nucleus | 6.95 | 16.67 |
| CDY13389 | Canola | nucleus | 14.13 | 15.67 |
| CDX89779 | Canola | endoplasmic reticulum, extracellular | 15.47 | 13.24 |
| CDY18267 | Canola | endoplasmic reticulum, plasma membrane | 15.25 | 13.05 |
| CDY68842 | Canola | vacuole | 15.92 | 12.61 |
| CDY01147 | Canola | extracellular, golgi, vacuole | 15.47 | 12.48 |
| CDY26705 | Canola | endoplasmic reticulum, plasma membrane, plastid | 14.13 | 12.16 |
| CDY19266 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 14.13 | 12.09 |
| CDY16985 | Canola | endoplasmic reticulum, golgi | 17.71 | 11.63 |
| CDX69426 | Canola | endoplasmic reticulum, golgi, plastid | 17.71 | 11.55 |
| CDY21687 | Canola | endoplasmic reticulum, vacuole | 13.23 | 11.55 |
| CDX68162 | Canola | extracellular, plasma membrane, vacuole | 12.56 | 11.36 |
| CDX85859 | Canola | extracellular, plasma membrane, vacuole | 12.56 | 11.36 |
| CDX81908 | Canola | endoplasmic reticulum, vacuole | 12.56 | 11.22 |
| CDY45396 | Canola | extracellular, golgi, vacuole | 13.45 | 11.07 |
| CDX73116 | Canola | extracellular, golgi, vacuole | 13.23 | 10.71 |
| CDX96274 | Canola | mitochondrion | 16.82 | 10.19 |
| CDY11550 | Canola | mitochondrion | 16.82 | 9.4 |
| CDY31127 | Canola | cytosol | 12.11 | 8.31 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 10.76 | 6.75 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 10.76 | 6.66 |
| CDY29652 | Canola | endoplasmic reticulum | 10.54 | 6.45 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 12.56 | 6.41 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 10.31 | 6.03 |
| CDX93536 | Canola | extracellular, vacuole | 12.78 | 5.91 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 12.33 | 5.75 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 0.67 | 1.52 |
Protein Annotations
| EnsemblPlants:CDY01064 | EnsemblPlantsGene:GSBRNA2T00111104001 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil | PANTHER:PTHR31422 |
| PANTHER:PTHR31422:SF0 | PFAM:PF04576 | PFscan:PS51775 | ProteinID:CDY01064 | ProteinID:CDY01064.1 | SEG:seg |
| UniParc:UPI0004EBE0C4 | MapMan:35.1 | : | : | : | : |
Description
BnaC05g41360D
Coordinates
chrLK031923:-:971828..975870
Molecular Weight (calculated)
50624.0 Da
IEP (calculated)
6.010
GRAVY (calculated)
-0.767
Length
446 amino acids
Sequence
(BLAST)
(BLAST)
001: MESPSKDLIQ CCDCGCHSSP RSFHRSVKRR HDESNNPKVH IENECELLRE TVTSQQQSIQ ELYDELEKER NAAASAADES MNVMQRLQNE KAELQMELRQ
101: YKLYVGEKME HDLQEMLALE ELVNQREQTI MALTCEAQAY KHRMMSYGLT EGEAEGGKSG NSSDGYDLTA YDYPPLKCNV VENHDPLGAD VYVADDGKYP
201: PVVSPLKSLD QRISEMETNP GFAELDGGFS GVKEKMVVGG QSPRPQRHFR RMSTKEVRPD AYVESPKKVA NVSSYTENVN AKDDDSSDIG GDDMSDRVYT
301: IDSVHHGVTE QKLEAETSDG MDLGDPDITK LYMRLQALEA DRESMKQALV SMRTDKAQMV LLKEIAQHLS KEVVPQRRLP LRKASTGGPL PFTPVFKWIS
401: SFVSWRRKAR RSKYMYGMSA NNMGLQMLLE KVPRSRKWRC LRSTQV
101: YKLYVGEKME HDLQEMLALE ELVNQREQTI MALTCEAQAY KHRMMSYGLT EGEAEGGKSG NSSDGYDLTA YDYPPLKCNV VENHDPLGAD VYVADDGKYP
201: PVVSPLKSLD QRISEMETNP GFAELDGGFS GVKEKMVVGG QSPRPQRHFR RMSTKEVRPD AYVESPKKVA NVSSYTENVN AKDDDSSDIG GDDMSDRVYT
301: IDSVHHGVTE QKLEAETSDG MDLGDPDITK LYMRLQALEA DRESMKQALV SMRTDKAQMV LLKEIAQHLS KEVVPQRRLP LRKASTGGPL PFTPVFKWIS
401: SFVSWRRKAR RSKYMYGMSA NNMGLQMLLE KVPRSRKWRC LRSTQV
001: MESPIKCCDC GCDCCSSSPG SWIRSVKKRR HDELQTEKRF SIPELDDLDM FSNPRVQIEN ECELLRETVS NQQQTIQDLY HELEQERIAS STAADETVKM
101: IQTLEREKAK IDLELKQLQR SVDETLNYEN QEIEALENMV YQRDQTIQAL TFETQAYKHR MMSFGLTEAE ADGERSLLSR NPSMIDFSSE YDCPTQDYPP
201: LKCNINENQD PLEADIYVAD DENYPPADSP HGRVHLKTLD RRLSQMETNP SFTQLNRGRD VSEKGMVGES PRRQRHFRRI SPTGSSSSHL GASKELRPDV
301: FVDSPRSQSY SSKKMEDVSY TENNNAKDDL SEIGDDMSDR VYTIDSVHHS SVAHSGGVAE QKIEDGASDG NVVFPREHTD LGDPDITKLY MRLQALEADR
401: ESMKHALLSM RTEKAQMVLL KEIAQHLSKE VVPQRRLPLR KASIAGPLTF TPVFKWITSF VSWKRKARRS KYMYGMSGNN IGLQMLLEKV PRSRKWRCLR
501: STQV
101: IQTLEREKAK IDLELKQLQR SVDETLNYEN QEIEALENMV YQRDQTIQAL TFETQAYKHR MMSFGLTEAE ADGERSLLSR NPSMIDFSSE YDCPTQDYPP
201: LKCNINENQD PLEADIYVAD DENYPPADSP HGRVHLKTLD RRLSQMETNP SFTQLNRGRD VSEKGMVGES PRRQRHFRRI SPTGSSSSHL GASKELRPDV
301: FVDSPRSQSY SSKKMEDVSY TENNNAKDDL SEIGDDMSDR VYTIDSVHHS SVAHSGGVAE QKIEDGASDG NVVFPREHTD LGDPDITKLY MRLQALEADR
401: ESMKHALLSM RTEKAQMVLL KEIAQHLSKE VVPQRRLPLR KASIAGPLTF TPVFKWITSF VSWKRKARRS KYMYGMSGNN IGLQMLLEKV PRSRKWRCLR
501: STQV
Arabidopsis Description
F26K24.14 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF14]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.