Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73116 | Canola | extracellular, golgi, vacuole | 96.49 | 94.92 |
| Bra015891.1-P | Field mustard | endoplasmic reticulum, golgi | 94.1 | 93.92 |
| AT1G74830.1 | Thale cress | extracellular, golgi, vacuole | 80.44 | 80.44 |
| CDX68162 | Canola | extracellular, plasma membrane, vacuole | 71.59 | 78.7 |
| CDX85859 | Canola | extracellular, plasma membrane, vacuole | 71.59 | 78.7 |
| CDY26705 | Canola | endoplasmic reticulum, plasma membrane, plastid | 61.62 | 64.48 |
| CDY19266 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 60.7 | 63.15 |
| CDY21687 | Canola | endoplasmic reticulum, vacuole | 59.41 | 63.01 |
| CDX81908 | Canola | endoplasmic reticulum, vacuole | 57.56 | 62.53 |
| PGSC0003DMT400030876 | Potato | endoplasmic reticulum, extracellular | 44.1 | 46.14 |
| Solyc12g027730.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 44.1 | 46.05 |
| KRH54475 | Soybean | endoplasmic reticulum | 46.86 | 42.19 |
| KRH63445 | Soybean | endoplasmic reticulum | 47.6 | 41.95 |
| PGSC0003DMT400062848 | Potato | golgi | 44.28 | 40.07 |
| Solyc03g113600.2.1 | Tomato | golgi | 43.91 | 39.8 |
| PGSC0003DMT400083120 | Potato | endoplasmic reticulum | 43.91 | 39.8 |
| VIT_17s0000g05320.t01 | Wine grape | endoplasmic reticulum, golgi | 45.57 | 39.77 |
| Solyc06g071190.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 45.39 | 38.5 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 9.96 | 27.27 |
| CDY09477 | Canola | nucleus | 7.75 | 22.58 |
| CDY47332 | Canola | extracellular, plasma membrane | 10.7 | 22.22 |
| CDY01114 | Canola | extracellular, plasma membrane | 10.7 | 22.22 |
| CDX69426 | Canola | endoplasmic reticulum, golgi, plastid | 24.35 | 19.3 |
| CDY16985 | Canola | endoplasmic reticulum, golgi | 23.8 | 19.0 |
| CDY14078 | Canola | nucleus | 12.36 | 17.36 |
| CDX88641 | Canola | nucleus | 3.87 | 17.21 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 22.32 | 16.78 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 21.96 | 16.74 |
| CDX96274 | Canola | mitochondrion | 22.69 | 16.71 |
| CDY29652 | Canola | endoplasmic reticulum | 21.22 | 15.78 |
| CDY70407 | Canola | peroxisome | 10.7 | 15.72 |
| CDX98935 | Canola | nucleus | 11.81 | 15.69 |
| CDY04993 | Canola | nucleus | 11.81 | 15.61 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 24.91 | 15.45 |
| CDX78259 | Canola | nucleus | 11.44 | 15.27 |
| CDX70091 | Canola | nucleus | 11.99 | 15.22 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 21.4 | 15.2 |
| CDY11550 | Canola | mitochondrion | 22.32 | 15.16 |
| CDY02887 | Canola | cytosol, nucleus, peroxisome | 10.52 | 15.04 |
| CDY08489 | Canola | nucleus | 10.7 | 14.99 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 26.38 | 14.94 |
| CDX93536 | Canola | extracellular, vacuole | 26.38 | 14.83 |
| CDX67607 | Canola | peroxisome | 11.44 | 14.76 |
| CDX73453 | Canola | nucleus | 11.25 | 14.73 |
| CDY13389 | Canola | nucleus | 10.7 | 14.43 |
| CDX76832 | Canola | nucleus | 8.49 | 14.29 |
| CDX68698 | Canola | cytosol | 7.75 | 14.29 |
| CDY67532 | Canola | nucleus | 10.89 | 14.15 |
| CDY34794 | Canola | nucleus | 8.49 | 14.11 |
| CDY18267 | Canola | endoplasmic reticulum, plasma membrane | 13.28 | 13.82 |
| CDY28219 | Canola | cytosol | 7.38 | 13.61 |
| CDX76130 | Canola | cytosol | 9.96 | 13.57 |
| CDY01064 | Canola | nucleus | 11.07 | 13.45 |
| CDX89779 | Canola | endoplasmic reticulum, extracellular | 12.92 | 13.44 |
| CDX72271 | Canola | nucleus | 9.41 | 13.21 |
| CDY07526 | Canola | nucleus | 7.01 | 13.19 |
| CDY02772 | Canola | nucleus | 8.49 | 12.57 |
| CDY50792 | Canola | nucleus | 8.49 | 12.5 |
| CDY51277 | Canola | nucleus | 8.49 | 12.5 |
| CDY31127 | Canola | cytosol | 14.94 | 12.46 |
| CDY01147 | Canola | extracellular, golgi, vacuole | 12.55 | 12.3 |
| CDY32744 | Canola | nucleus | 8.3 | 12.3 |
| CDY68842 | Canola | vacuole | 12.55 | 12.08 |
| CDX88643 | Canola | nucleus | 5.17 | 11.76 |
| CDY11846 | Canola | nucleus | 4.98 | 11.34 |
| CDY07525 | Canola | peroxisome | 1.48 | 8.33 |
Protein Annotations
| MapMan:20.2.4.3 | GO:A0A078I653 | UniProt:A0A078I653 | EnsemblPlants:CDY45396 | ProteinID:CDY45396 | ProteinID:CDY45396.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0017022 | EnsemblPlantsGene:GSBRNA2T00081906001 | InterPro:GTD-bd | InterPro:IPR007656 | PFAM:PF04576 |
| PFscan:PS51775 | PANTHER:PTHR31448 | PANTHER:PTHR31448:SF9 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0004EEF472 |
| SEG:seg | : | : | : | : | : |
Description
BnaA07g31760DBnaA07g31760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I653]
Coordinates
chrLK032624:-:33095..34875
Molecular Weight (calculated)
61870.9 Da
IEP (calculated)
4.431
GRAVY (calculated)
-0.494
Length
542 amino acids
Sequence
(BLAST)
(BLAST)
001: MITQLLCFFL FLFLLLQATM MFKRSFKNFV EQELGSFPRF LIYTVLEWIL ITALFIDGVL AFLSNQYARF FDLDAPCLLC TRIDHVLVPR DPHFYYNDSI
101: CDSHKKKVSS LAYCHVHKKL SEIKHMCEGC LLSFATEKES DCDTYKSLIG ILHKDLEVLI EDERDLPLGL KKQDDLVQTT TTHLIDYKTD SLKQHCSCCG
201: ELLKTKSEKF LKKNNSFLAP APSPRVSYNK LSEINESEFK DFDVEERTPS FVRGGNKFFG VPLSDSAQNS PRWSVRSLRK PSLDKLEIPD SNGESILNQL
301: KKEVRLDKKS LIDLYMELDE ERSASAVAAN NAMAMITKLQ AEKSAIQMEA LQYQRMMDEQ AEYDQEALQS MSSDLAKKEE EFKELEAEFE AYRERYGCLT
401: DDEASGDEFL EEQDEFLEEH GNARADDDCQ ETKPDSDFED CSSNQEEDVE NVDQNRSLQM KSSEESNTKN DASAEEEKAG GVSKEGIVKE LSEITERLSA
501: LQLDGELLKH IADVSEGEAM LLQISQNLHM LRSSFVAMPS ES
101: CDSHKKKVSS LAYCHVHKKL SEIKHMCEGC LLSFATEKES DCDTYKSLIG ILHKDLEVLI EDERDLPLGL KKQDDLVQTT TTHLIDYKTD SLKQHCSCCG
201: ELLKTKSEKF LKKNNSFLAP APSPRVSYNK LSEINESEFK DFDVEERTPS FVRGGNKFFG VPLSDSAQNS PRWSVRSLRK PSLDKLEIPD SNGESILNQL
301: KKEVRLDKKS LIDLYMELDE ERSASAVAAN NAMAMITKLQ AEKSAIQMEA LQYQRMMDEQ AEYDQEALQS MSSDLAKKEE EFKELEAEFE AYRERYGCLT
401: DDEASGDEFL EEQDEFLEEH GNARADDDCQ ETKPDSDFED CSSNQEEDVE NVDQNRSLQM KSSEESNTKN DASAEEEKAG GVSKEGIVKE LSEITERLSA
501: LQLDGELLKH IADVSEGEAM LLQISQNLHM LRSSFVAMPS ES
001: MYIQLLCFFL FLFLLLQATM SKRSFKKFVE QELGSLPHFL IYTVLEWSLI VFLFIDGVIA FLSNQFAKFF DLNIPCLLCT RIDHILVPRD PQFYYNESIC
101: DSHKKKVSSL AYCHVHKKLS EIKHMCEGCL LSFATEKDSD CDTYKSLIGI LHKDLELLID DERDLPLAFK KDDNLVQTTK NLVDYKTNNI KNDSLKQHCS
201: CCGELLKIKS EKLPKNNNSF LAPAPSPRVS HNKLSENESE FKDMDVDRTP SFVRGGNKFF GIPLSDSAQN SPRWSVRSLK KSVLNKTENA SDTTDPTGES
301: ILNQLKKEVR LDKKSLIDLY MELDEERSAS AVAANEAMAM ITRLQAEKAA VQMEALQYQR MMDEQAEYDQ EALQSMSSEL AKREEEMKEL EAEFEVYREK
401: YGCLTDQEDA REEFHKQNGN ASAYDDCQET KPVSDLAVSS SNQQENGENI DQNGQSKRSE ESTAENVVSA DEEKGSESKE GIVKELSEIT ERLSTLQSNG
501: DLLKHIADVL DVSEGEAILL QISQNLHMLR SFVAMPSESM NL
101: DSHKKKVSSL AYCHVHKKLS EIKHMCEGCL LSFATEKDSD CDTYKSLIGI LHKDLELLID DERDLPLAFK KDDNLVQTTK NLVDYKTNNI KNDSLKQHCS
201: CCGELLKIKS EKLPKNNNSF LAPAPSPRVS HNKLSENESE FKDMDVDRTP SFVRGGNKFF GIPLSDSAQN SPRWSVRSLK KSVLNKTENA SDTTDPTGES
301: ILNQLKKEVR LDKKSLIDLY MELDEERSAS AVAANEAMAM ITRLQAEKAA VQMEALQYQR MMDEQAEYDQ EALQSMSSEL AKREEEMKEL EAEFEVYREK
401: YGCLTDQEDA REEFHKQNGN ASAYDDCQET KPVSDLAVSS SNQQENGENI DQNGQSKRSE ESTAENVVSA DEEKGSESKE GIVKELSEIT ERLSTLQSNG
501: DLLKHIADVL DVSEGEAILL QISQNLHMLR SFVAMPSESM NL
Arabidopsis Description
MYOB6Probable myosin-binding protein 6 [Source:UniProtKB/Swiss-Prot;Acc:F4HVS6]
SUBAcon: [golgi,extracellular,vacuole]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.