Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 3
- extracellular 2
- vacuole 3
- plasma membrane 2
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031059.1-P | Field mustard | endoplasmic reticulum, vacuole | 95.39 | 93.15 |
| CDY21687 | Canola | endoplasmic reticulum, vacuole | 95.39 | 93.15 |
| CDY26705 | Canola | endoplasmic reticulum, plasma membrane, plastid | 81.16 | 78.19 |
| CDY19266 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 81.36 | 77.93 |
| AT1G18990.1 | Thale cress | endoplasmic reticulum, plasma membrane | 80.36 | 76.53 |
| CDX85859 | Canola | extracellular, plasma membrane, vacuole | 58.12 | 58.82 |
| CDX68162 | Canola | extracellular, plasma membrane, vacuole | 57.72 | 58.42 |
| CDY45396 | Canola | extracellular, golgi, vacuole | 62.53 | 57.56 |
| CDX73116 | Canola | extracellular, golgi, vacuole | 62.53 | 56.62 |
| PGSC0003DMT400030876 | Potato | endoplasmic reticulum, extracellular | 44.89 | 43.24 |
| Solyc12g027730.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 44.49 | 42.77 |
| KRH54475 | Soybean | endoplasmic reticulum | 48.5 | 40.2 |
| KRH63445 | Soybean | endoplasmic reticulum | 48.5 | 39.35 |
| PGSC0003DMT400062848 | Potato | golgi | 45.29 | 37.73 |
| VIT_17s0000g05320.t01 | Wine grape | endoplasmic reticulum, golgi | 46.49 | 37.36 |
| Solyc03g113600.2.1 | Tomato | golgi | 44.69 | 37.29 |
| PGSC0003DMT400083120 | Potato | endoplasmic reticulum | 44.49 | 37.12 |
| Solyc06g071190.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 45.29 | 35.37 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 10.82 | 27.27 |
| CDY09477 | Canola | nucleus | 8.82 | 23.66 |
| CDY47332 | Canola | extracellular, plasma membrane | 11.82 | 22.61 |
| CDY01114 | Canola | extracellular, plasma membrane | 11.82 | 22.61 |
| CDX69426 | Canola | endoplasmic reticulum, golgi, plastid | 25.85 | 18.86 |
| CDY16985 | Canola | endoplasmic reticulum, golgi | 25.25 | 18.56 |
| CDX88641 | Canola | nucleus | 4.41 | 18.03 |
| CDX96274 | Canola | mitochondrion | 25.05 | 16.98 |
| CDY14078 | Canola | nucleus | 13.03 | 16.84 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 23.25 | 16.32 |
| CDY29652 | Canola | endoplasmic reticulum | 23.25 | 15.91 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 27.86 | 15.9 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 22.85 | 15.81 |
| CDY11550 | Canola | mitochondrion | 25.05 | 15.66 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 23.45 | 15.33 |
| CDY02887 | Canola | cytosol, nucleus, peroxisome | 11.62 | 15.3 |
| CDY04993 | Canola | nucleus | 12.42 | 15.12 |
| CDX78259 | Canola | nucleus | 12.22 | 15.02 |
| CDX98935 | Canola | nucleus | 12.22 | 14.95 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 28.26 | 14.73 |
| CDX93536 | Canola | extracellular, vacuole | 28.46 | 14.73 |
| CDX70091 | Canola | nucleus | 12.42 | 14.52 |
| CDX73453 | Canola | nucleus | 12.02 | 14.49 |
| CDY70407 | Canola | peroxisome | 10.62 | 14.36 |
| CDX67607 | Canola | peroxisome | 12.02 | 14.29 |
| CDY08489 | Canola | nucleus | 10.82 | 13.95 |
| CDX76130 | Canola | cytosol | 11.02 | 13.82 |
| CDY18267 | Canola | endoplasmic reticulum, plasma membrane | 14.03 | 13.44 |
| CDY31127 | Canola | cytosol | 17.23 | 13.23 |
| CDY02772 | Canola | nucleus | 9.62 | 13.11 |
| CDY32744 | Canola | nucleus | 9.62 | 13.11 |
| CDX89779 | Canola | endoplasmic reticulum, extracellular | 13.63 | 13.05 |
| CDX76832 | Canola | nucleus | 8.42 | 13.04 |
| CDY11846 | Canola | nucleus | 6.21 | 13.03 |
| CDX88643 | Canola | nucleus | 6.21 | 13.03 |
| CDY34794 | Canola | nucleus | 8.42 | 12.88 |
| CDY07526 | Canola | nucleus | 7.41 | 12.85 |
| CDY50792 | Canola | nucleus | 9.42 | 12.77 |
| CDY51277 | Canola | nucleus | 9.42 | 12.77 |
| CDY13389 | Canola | nucleus | 10.22 | 12.69 |
| CDY28219 | Canola | cytosol | 7.41 | 12.59 |
| CDX68698 | Canola | cytosol | 7.41 | 12.59 |
| CDY01064 | Canola | nucleus | 11.22 | 12.56 |
| CDY67532 | Canola | nucleus | 10.42 | 12.47 |
| CDY01147 | Canola | extracellular, golgi, vacuole | 13.03 | 11.75 |
| CDX72271 | Canola | nucleus | 9.02 | 11.66 |
| CDY68842 | Canola | vacuole | 13.03 | 11.55 |
| CDY07525 | Canola | peroxisome | 1.4 | 7.29 |
Protein Annotations
| EnsemblPlants:CDX81908 | EnsemblPlantsGene:GSBRNA2T00136867001 | GO:A0A078D3N7 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil |
| PANTHER:PTHR31448 | PANTHER:PTHR31448:SF9 | PFAM:PF04576 | PFscan:PS51775 | ProteinID:CDX81908 | ProteinID:CDX81908.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EDFC80 | MapMan:20.2.4.3 | : | : |
Description
BnaC08g36930D
Coordinates
chrLK031826:-:1429599..1431240
Molecular Weight (calculated)
56859.9 Da
IEP (calculated)
4.520
GRAVY (calculated)
-0.633
Length
499 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNRSFKNFI EDELGTFPHL LIYAILEWII IILLFLDGLL AFSSNQFSKL FDLKTPCLLC TRLDHVLVPT NPDFYYNDSI CDSHKKNVSS LAYCHVHKKL
101: SEIKRMCEGC LLSFATEKET DVDTYKSLIG ILHKDLELLI DDEHQKAFPV TGSKLDLRAN NRLQEQQQRC SCCGELLKIK TEKQPNSNGN RSFFAAPSPS
201: PRVSFNQRTM DFSNLPEEEE AANNKDTLDR TPSFVRGGHN RFFSDSAQNS PRWSVRSMKR TLIDQTGPDA EVLDGDSILH HLNRQVRLDR KSLMDLYMEL
301: DEERSASAVA ANNAMAMITR LQAEKAAVQM EALQYQRMMD EQAEYDQEAV QSLSGLLVKR EEDMKELEAE VEAKGGEKHQ DGEGGEEEEF LDEENNETKQ
401: DSSSNHEEDL VQMKDSGEET KDNNGGMIIE EEKEKGSRKD MLVKEISEIT ERLHEIESKG ELLQHISEVL DVSEGEAILL QISQNLNMLR SFIEMPSES
101: SEIKRMCEGC LLSFATEKET DVDTYKSLIG ILHKDLELLI DDEHQKAFPV TGSKLDLRAN NRLQEQQQRC SCCGELLKIK TEKQPNSNGN RSFFAAPSPS
201: PRVSFNQRTM DFSNLPEEEE AANNKDTLDR TPSFVRGGHN RFFSDSAQNS PRWSVRSMKR TLIDQTGPDA EVLDGDSILH HLNRQVRLDR KSLMDLYMEL
301: DEERSASAVA ANNAMAMITR LQAEKAAVQM EALQYQRMMD EQAEYDQEAV QSLSGLLVKR EEDMKELEAE VEAKGGEKHQ DGEGGEEEEF LDEENNETKQ
401: DSSSNHEEDL VQMKDSGEET KDNNGGMIIE EEKEKGSRKD MLVKEISEIT ERLHEIESKG ELLQHISEVL DVSEGEAILL QISQNLNMLR SFIEMPSES
001: MSNRSFKNFI EEELGTFPQF LIYALLEWIL IIILFIDGFL AFFSNQIAKF FDLKIPCLLC TRLDHVLVSR NPDFYYNDSI CDAHKKNVSS LAYCHVHKKL
101: SEIKRMCEGC LLSFATEKET DVDTYKSLIG ILHKDLELLI DDERELQLAF PVAGSKKDEN FYQVENRTNN SNDRFQRQQR CSCCGQIMKL KSDKPKSNNQ
201: SFFGAPSPSP RVSFNQRTLD LSNIKYTDLP EDDDALNTKG ASLDAVDDRT PSFVKGGNKF FGIPLSDSAQ NSPRWSVRSM KKSFVDQNGL ESEVLDGDSI
301: LQHLNRQVRL DRKSLMDLYM ELDEERSASA VAANNAMAMI TRLQAEKAAV QMEALQYQRM MDEQAEYDQE ALQSMNGLLV KREEEMKELE AGIEVYRLRY
401: GLLREERGEA EEFLDEETKP VSDLPVCSSN HEEDLEQMKD SAEDSIGNNG VMIIEEEKEN GSRKDMLVKE ISEITERLNA IESKGELLQQ ISDVLDVSEG
501: EAILLQISQN LHMLRSFIEM PTES
101: SEIKRMCEGC LLSFATEKET DVDTYKSLIG ILHKDLELLI DDERELQLAF PVAGSKKDEN FYQVENRTNN SNDRFQRQQR CSCCGQIMKL KSDKPKSNNQ
201: SFFGAPSPSP RVSFNQRTLD LSNIKYTDLP EDDDALNTKG ASLDAVDDRT PSFVKGGNKF FGIPLSDSAQ NSPRWSVRSM KKSFVDQNGL ESEVLDGDSI
301: LQHLNRQVRL DRKSLMDLYM ELDEERSASA VAANNAMAMI TRLQAEKAAV QMEALQYQRM MDEQAEYDQE ALQSMNGLLV KREEEMKELE AGIEVYRLRY
401: GLLREERGEA EEFLDEETKP VSDLPVCSSN HEEDLEQMKD SAEDSIGNNG VMIIEEEKEN GSRKDMLVKE ISEITERLNA IESKGELLQQ ISDVLDVSEG
501: EAILLQISQN LHMLRSFIEM PTES
Arabidopsis Description
MYOB5Probable myosin-binding protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMC8]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.