Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07525 | Canola | peroxisome | 22.62 | 98.96 |
| CDY70407 | Canola | peroxisome | 77.14 | 87.8 |
| CDY07526 | Canola | nucleus | 57.86 | 84.38 |
| AT3G54740.3 | Thale cress | cytosol, nucleus, peroxisome | 81.43 | 78.08 |
| CDX76130 | Canola | cytosol | 71.43 | 75.38 |
| CDX78259 | Canola | nucleus | 72.38 | 74.88 |
| CDY02887 | Canola | cytosol, nucleus, peroxisome | 66.67 | 73.88 |
| CDX73453 | Canola | nucleus | 72.38 | 73.43 |
| CDY14078 | Canola | nucleus | 41.19 | 44.82 |
| CDY08489 | Canola | nucleus | 38.33 | 41.6 |
| CDY04993 | Canola | nucleus | 40.48 | 41.46 |
| CDX70091 | Canola | nucleus | 41.9 | 41.22 |
| CDX98935 | Canola | nucleus | 39.52 | 40.69 |
| CDY01064 | Canola | nucleus | 41.19 | 38.79 |
| CDY67532 | Canola | nucleus | 36.19 | 36.45 |
| CDX88641 | Canola | nucleus | 6.43 | 22.13 |
| CDX68698 | Canola | cytosol | 14.76 | 21.09 |
| CDY28219 | Canola | cytosol | 13.81 | 19.73 |
| CDY34794 | Canola | nucleus | 14.52 | 18.71 |
| CDX76832 | Canola | nucleus | 14.29 | 18.63 |
| CDY50792 | Canola | nucleus | 15.95 | 18.21 |
| CDY01114 | Canola | extracellular, plasma membrane | 11.19 | 18.01 |
| CDY47332 | Canola | extracellular, plasma membrane | 11.19 | 18.01 |
| CDY02772 | Canola | nucleus | 15.48 | 17.76 |
| CDY09477 | Canola | nucleus | 7.86 | 17.74 |
| CDY51277 | Canola | nucleus | 15.48 | 17.66 |
| CDX88643 | Canola | nucleus | 10.0 | 17.65 |
| CDX72271 | Canola | nucleus | 16.19 | 17.62 |
| CDY32744 | Canola | nucleus | 15.24 | 17.49 |
| CDY11846 | Canola | nucleus | 9.52 | 16.81 |
| CDY13389 | Canola | nucleus | 15.0 | 15.67 |
| CDX89779 | Canola | endoplasmic reticulum, extracellular | 17.14 | 13.82 |
| CDY01147 | Canola | extracellular, golgi, vacuole | 18.1 | 13.74 |
| CDY18267 | Canola | endoplasmic reticulum, plasma membrane | 16.9 | 13.63 |
| CDY68842 | Canola | vacuole | 17.38 | 12.97 |
| CDX68162 | Canola | extracellular, plasma membrane, vacuole | 14.29 | 12.17 |
| CDX85859 | Canola | extracellular, plasma membrane, vacuole | 14.29 | 12.17 |
| CDX81908 | Canola | endoplasmic reticulum, vacuole | 14.29 | 12.02 |
| CDY26705 | Canola | endoplasmic reticulum, plasma membrane, plastid | 14.76 | 11.97 |
| CDY21687 | Canola | endoplasmic reticulum, vacuole | 14.52 | 11.94 |
| CDY19266 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 14.76 | 11.9 |
| CDY45396 | Canola | extracellular, golgi, vacuole | 14.76 | 11.44 |
| CDX73116 | Canola | extracellular, golgi, vacuole | 14.29 | 10.89 |
| CDX96274 | Canola | mitochondrion | 19.05 | 10.87 |
| CDY16985 | Canola | endoplasmic reticulum, golgi | 16.43 | 10.16 |
| CDY11550 | Canola | mitochondrion | 19.05 | 10.03 |
| CDX69426 | Canola | endoplasmic reticulum, golgi, plastid | 15.95 | 9.8 |
| CDY31127 | Canola | cytosol | 14.52 | 9.38 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 14.76 | 7.09 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 15.48 | 6.79 |
| CDX93536 | Canola | extracellular, vacuole | 15.48 | 6.74 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 11.19 | 6.61 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 11.19 | 6.52 |
| CDY29652 | Canola | endoplasmic reticulum | 11.19 | 6.45 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 10.95 | 6.03 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 0.48 | 1.01 |
Protein Annotations
| EnsemblPlants:CDX67607 | EnsemblPlantsGene:GSBRNA2T00098754001 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil | PANTHER:PTHR31422 |
| PANTHER:PTHR31422:SF0 | PFAM:PF04576 | PFscan:PS51775 | ProteinID:CDX67607 | ProteinID:CDX67607.1 | SEG:seg |
| UniParc:UPI0004EEC6A8 | MapMan:35.1 | : | : | : | : |
Description
BnaA07g16470D
Coordinates
chrLK031787:+:1200749..1202321
Molecular Weight (calculated)
47696.9 Da
IEP (calculated)
5.294
GRAVY (calculated)
-0.470
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSEQSFPPR DVVKCCDFVC DYSLGACTTT VKRKFNEEGN LMLLLSRRSS DSFSTAKLLV ESQCAALLED LSSQRKIVKD LHLELEEERN AAASAANETM
101: SMILRLQREK AEIQMEARQF KGFAEEKMTH DQEKLKVLEE LLYEKDQAIE ALSYEVEAYK DSLLSCGITE AEMQDQVLGF EAYPCEYTLK CSVDDENPSG
201: PDGDVEVVEK VMVGQSPRWP YYDPNSPLEA AKEIKGADSP MSCSSDRVYT IDSVLVGVSE VKIDNEPSKM SKGELKGDHW NSPRYQEPVV MTQHGVNEPD
301: IEKLYTRLQA LEADRESLRH TIVSMRTDKA QLVLLKEIAQ HLSKESVTTK RRHLVSKMPS FKAFCVVTVF KWIVSFVSWR RKAKQNKYVY NLSANNMGML
401: MILGEGSRTR RWSCLTSSHV
101: SMILRLQREK AEIQMEARQF KGFAEEKMTH DQEKLKVLEE LLYEKDQAIE ALSYEVEAYK DSLLSCGITE AEMQDQVLGF EAYPCEYTLK CSVDDENPSG
201: PDGDVEVVEK VMVGQSPRWP YYDPNSPLEA AKEIKGADSP MSCSSDRVYT IDSVLVGVSE VKIDNEPSKM SKGELKGDHW NSPRYQEPVV MTQHGVNEPD
301: IEKLYTRLQA LEADRESLRH TIVSMRTDKA QLVLLKEIAQ HLSKESVTTK RRHLVSKMPS FKAFCVVTVF KWIVSFVSWR RKAKQNKYVY NLSANNMGML
401: MILGEGSRTR RWSCLTSSHV
001: MDSELSFSSR DVVNCCEYGC DYSLGACSSD PLARTVKRKF NEFKEGNNMM LLRGSSDSSS SNAKILVENE CAALLEALSS QRETVKDLHL ELEEERNAAA
101: SAANETMSMI LRLQREKAEI QMEARQFKMF AQEKMTHDQE KLSVLENLLY EKEQAIEALT YEVEAYKHRL LSYGVSEAEI HDQILGFGRD SSTVGFDVYP
201: CEYTSLECSV DENPSGPDGN FEIEEKVMVG QSPRWPYYDP NSPLGTAKDI KGASFADSPM SSSSDRVYTI DSIHVGVSEV KIDDEPNKMS KGKLNGDHWN
301: SPRYQEPFTT QQGVNEPDIE KLYTRLQALE ADRESLRQII VSMRTDKAQL VLLKEIAQHL TKETGATSRR NPVSKMPSLK VFSVVTVFKW IVSFVSWKRK
401: ARQNKYVYEL SANNMGMLMI LGEGSGTRRW RCLTSSHV
101: SAANETMSMI LRLQREKAEI QMEARQFKMF AQEKMTHDQE KLSVLENLLY EKEQAIEALT YEVEAYKHRL LSYGVSEAEI HDQILGFGRD SSTVGFDVYP
201: CEYTSLECSV DENPSGPDGN FEIEEKVMVG QSPRWPYYDP NSPLGTAKDI KGASFADSPM SSSSDRVYTI DSIHVGVSEV KIDDEPNKMS KGKLNGDHWN
301: SPRYQEPFTT QQGVNEPDIE KLYTRLQALE ADRESLRQII VSMRTDKAQL VLLKEIAQHL TKETGATSRR NPVSKMPSLK VFSVVTVFKW IVSFVSWKRK
401: ARQNKYVYEL SANNMGMLMI LGEGSGTRRW RCLTSSHV
Arabidopsis Description
Uncharacterized protein T5N23_100 [Source:UniProtKB/TrEMBL;Acc:Q9M1S6]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.