Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28219 | Canola | cytosol | 90.14 | 90.14 |
| CDX72271 | Canola | nucleus | 78.57 | 59.84 |
| AT4G30830.1 | Thale cress | nucleus | 73.81 | 59.78 |
| CDY13389 | Canola | nucleus | 77.55 | 56.72 |
| CDY34794 | Canola | nucleus | 53.4 | 48.16 |
| CDX76832 | Canola | nucleus | 52.04 | 47.52 |
| CDX88641 | Canola | nucleus | 11.56 | 27.87 |
| CDY50792 | Canola | nucleus | 32.99 | 26.36 |
| CDY51277 | Canola | nucleus | 32.99 | 26.36 |
| VIT_11s0037g00610.t01 | Wine grape | nucleus | 40.82 | 25.59 |
| CDY32744 | Canola | nucleus | 31.29 | 25.14 |
| CDY02772 | Canola | nucleus | 31.29 | 25.14 |
| KRH55008 | Soybean | cytosol | 12.93 | 23.6 |
| KRH37764 | Soybean | nucleus | 36.05 | 23.14 |
| CDX88643 | Canola | nucleus | 18.37 | 22.69 |
| KRH12784 | Soybean | nucleus | 34.69 | 22.37 |
| CDY11846 | Canola | nucleus | 18.03 | 22.27 |
| KRH72337 | Soybean | nucleus | 35.03 | 21.96 |
| KRH63109 | Soybean | nucleus | 34.01 | 21.69 |
| PGSC0003DMT400023950 | Potato | nucleus | 32.65 | 21.57 |
| PGSC0003DMT400028965 | Potato | nucleus | 32.99 | 21.41 |
| Solyc07g005910.2.1 | Tomato | nucleus | 32.99 | 21.41 |
| KRH03013 | Soybean | nucleus | 34.35 | 21.31 |
| Os08t0269000-01 | Rice | cytosol, golgi, nucleus | 18.37 | 18.62 |
| Solyc11g020850.1.1 | Tomato | nucleus | 32.31 | 18.1 |
| Zm00001d024102_P002 | Maize | nucleus | 21.09 | 17.51 |
| TraesCS5D01G410200.1 | Wheat | nucleus | 21.77 | 16.89 |
| TraesCS5A01G400200.1 | Wheat | nucleus | 21.43 | 16.62 |
| TraesCS5B01G405000.1 | Wheat | nucleus | 21.09 | 16.45 |
| TraesCS7D01G282800.1 | Wheat | nucleus | 24.15 | 16.28 |
| Os08t0442350-01 | Rice | nucleus | 27.55 | 16.27 |
| TraesCS7B01G199800.1 | Wheat | nucleus | 24.49 | 16.25 |
| TraesCS7A01G285400.1 | Wheat | nucleus | 24.49 | 16.25 |
| CDY02887 | Canola | cytosol, nucleus, peroxisome | 20.41 | 15.83 |
| CDX76130 | Canola | cytosol | 21.09 | 15.58 |
| CDY14078 | Canola | nucleus | 20.41 | 15.54 |
| OQU80230 | Sorghum | cytosol | 20.75 | 15.25 |
| CDY04993 | Canola | nucleus | 21.09 | 15.12 |
| CDX78259 | Canola | nucleus | 20.41 | 14.78 |
| CDX67607 | Canola | peroxisome | 21.09 | 14.76 |
| CDX73453 | Canola | nucleus | 20.75 | 14.73 |
| GSMUA_Achr10P... | Banana | nucleus | 24.15 | 14.73 |
| CDX98935 | Canola | nucleus | 20.41 | 14.71 |
| CDY01114 | Canola | extracellular, plasma membrane | 12.93 | 14.56 |
| CDY47332 | Canola | extracellular, plasma membrane | 12.93 | 14.56 |
| HORVU5Hr1G097200.5 | Barley | cytosol | 21.09 | 14.49 |
| OQU80548 | Sorghum | nucleus | 25.51 | 14.2 |
| CDX70091 | Canola | nucleus | 20.41 | 14.05 |
| CDY67532 | Canola | nucleus | 19.73 | 13.91 |
| CDY08489 | Canola | nucleus | 18.03 | 13.7 |
| CDY07526 | Canola | nucleus | 13.27 | 13.54 |
| CDY01064 | Canola | nucleus | 20.07 | 13.23 |
| CDY70407 | Canola | peroxisome | 15.99 | 12.74 |
| Solyc12g009900.1.1 | Tomato | cytosol | 27.21 | 12.56 |
| CDY09477 | Canola | nucleus | 7.82 | 12.37 |
| PGSC0003DMT400020469 | Potato | cytosol | 25.17 | 10.66 |
| Zm00001d032145_P001 | Maize | nucleus | 22.45 | 10.66 |
| CDX89779 | Canola | endoplasmic reticulum, extracellular | 16.33 | 9.21 |
| CDY18267 | Canola | endoplasmic reticulum, plasma membrane | 15.99 | 9.02 |
| CDY01147 | Canola | extracellular, golgi, vacuole | 16.67 | 8.86 |
| CDX68162 | Canola | extracellular, plasma membrane, vacuole | 14.63 | 8.72 |
| CDX85859 | Canola | extracellular, plasma membrane, vacuole | 14.63 | 8.72 |
| CDY68842 | Canola | vacuole | 16.33 | 8.53 |
| CDY21687 | Canola | endoplasmic reticulum, vacuole | 13.61 | 7.83 |
| CDY45396 | Canola | extracellular, golgi, vacuole | 14.29 | 7.75 |
| CDY26705 | Canola | endoplasmic reticulum, plasma membrane, plastid | 13.27 | 7.53 |
| CDY19266 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 13.27 | 7.49 |
| CDX81908 | Canola | endoplasmic reticulum, vacuole | 12.59 | 7.41 |
| CDX73116 | Canola | extracellular, golgi, vacuole | 13.61 | 7.26 |
| CDX96274 | Canola | mitochondrion | 18.03 | 7.2 |
| CDY11550 | Canola | mitochondrion | 18.03 | 6.64 |
| CDY31127 | Canola | cytosol | 13.95 | 6.31 |
| CDY16985 | Canola | endoplasmic reticulum, golgi | 13.95 | 6.04 |
| CDX69426 | Canola | endoplasmic reticulum, golgi, plastid | 13.95 | 5.99 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 13.95 | 5.77 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 13.95 | 5.69 |
| CDY29652 | Canola | endoplasmic reticulum | 13.61 | 5.49 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 13.61 | 5.24 |
| CDY07525 | Canola | peroxisome | 1.7 | 5.21 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 14.29 | 4.39 |
| CDX93536 | Canola | extracellular, vacuole | 14.29 | 4.36 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 12.59 | 4.23 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX68698 | EnsemblPlantsGene:GSBRNA2T00130378001 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil | PANTHER:PTHR31422 |
| PANTHER:PTHR31422:SF1 | PFAM:PF04576 | PFscan:PS51775 | ProteinID:CDX68698 | ProteinID:CDX68698.1 | SEG:seg |
| UniParc:UPI0004EDB4C9 | MapMan:35.2 | : | : | : | : |
Description
BnaC01g07550D
Coordinates
chrLK031789:-:799410..800508
Molecular Weight (calculated)
34220.8 Da
IEP (calculated)
5.031
GRAVY (calculated)
-0.652
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MLERSHSLRI HGAETLDLRL ALYECKEVTE TLQDELNAER EASATSASEA LSMILRLQGE KAELAREAGQ YKRIAQEEMS HAEMWFAHLE DFIHQKELVI
101: TALEYQVEAY RSQLLSLGYS DLSSLDVKLQ ENDVRSQIPF PELVNDLSVP VEKEVIEESV DSQKSYFDVY WDHIKKMDEK VKEFKTEDAL MMKVAMKTKM
201: KKKSTKQTRD RSGKRDRAEY QAELQRLRQR VDQLERERTK TVPETSGVIL KEMKEEVSCV HSSEVKRSNT MENLQPWIDP AIVSVQEAML NFWL
101: TALEYQVEAY RSQLLSLGYS DLSSLDVKLQ ENDVRSQIPF PELVNDLSVP VEKEVIEESV DSQKSYFDVY WDHIKKMDEK VKEFKTEDAL MMKVAMKTKM
201: KKKSTKQTRD RSGKRDRAEY QAELQRLRQR VDQLERERTK TVPETSGVIL KEMKEEVSCV HSSEVKRSNT MENLQPWIDP AIVSVQEAML NFWL
001: MVERSRSFRI PGAETNDLRI ALYERKEVIE RLQEELNAER EASETSANEA MSMILRLQGE KAELAMEADQ YKRMVEEQMS HAEMSFALLE DVIYQKEIEV
101: TALAYQVEVY RSQLLSLGFN DLKSLDVKLQ EDDDQDENML KMNDFSLSDR SQTPSPELVT DLSIPEEKEV IEQSLESQKS SLDVYWEQIK KLNEQVKELT
201: GFRDSMRDQH RTSVSESRGE EDFASSSNFQ EVTQERKKEA KGLSKTTDDT MMIKVSKQTK MEKKPSKQTR DRSGKRNRAE YQAELQRLRQ RVERLERGKS
301: NTEPETSGVI KQEEISLLKE VKEELSSVQS SDVKKSLNTM ENLQPWVDPT IISVQEAMLY FWL
101: TALAYQVEVY RSQLLSLGFN DLKSLDVKLQ EDDDQDENML KMNDFSLSDR SQTPSPELVT DLSIPEEKEV IEQSLESQKS SLDVYWEQIK KLNEQVKELT
201: GFRDSMRDQH RTSVSESRGE EDFASSSNFQ EVTQERKKEA KGLSKTTDDT MMIKVSKQTK MEKKPSKQTR DRSGKRNRAE YQAELQRLRQ RVERLERGKS
301: NTEPETSGVI KQEEISLLKE VKEELSSVQS SDVKKSLNTM ENLQPWVDPT IISVQEAMLY FWL
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q1PE31]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.