Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 6
- endoplasmic reticulum 5
- vacuole 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003783.1-P | Field mustard | extracellular, plasma membrane | 92.49 | 96.2 |
| CDX85859 | Canola | extracellular, plasma membrane, vacuole | 92.49 | 92.49 |
| AT1G74830.1 | Thale cress | extracellular, golgi, vacuole | 80.32 | 73.06 |
| CDY45396 | Canola | extracellular, golgi, vacuole | 78.7 | 71.59 |
| CDX73116 | Canola | extracellular, golgi, vacuole | 79.11 | 70.78 |
| CDY26705 | Canola | endoplasmic reticulum, plasma membrane, plastid | 61.46 | 58.49 |
| CDY21687 | Canola | endoplasmic reticulum, vacuole | 59.84 | 57.73 |
| CDX81908 | Canola | endoplasmic reticulum, vacuole | 58.42 | 57.72 |
| CDY19266 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 60.45 | 57.2 |
| PGSC0003DMT400030876 | Potato | endoplasmic reticulum, extracellular | 43.61 | 41.51 |
| Solyc12g027730.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 43.2 | 41.04 |
| KRH54475 | Soybean | endoplasmic reticulum | 49.49 | 40.53 |
| KRH63445 | Soybean | endoplasmic reticulum | 50.1 | 40.16 |
| PGSC0003DMT400062848 | Potato | golgi | 45.03 | 37.06 |
| VIT_17s0000g05320.t01 | Wine grape | endoplasmic reticulum, golgi | 46.25 | 36.72 |
| Solyc03g113600.2.1 | Tomato | golgi | 44.42 | 36.62 |
| PGSC0003DMT400083120 | Potato | endoplasmic reticulum | 43.81 | 36.12 |
| Solyc06g071190.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 45.44 | 35.05 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 10.14 | 25.25 |
| CDY47332 | Canola | extracellular, plasma membrane | 12.78 | 24.14 |
| CDY01114 | Canola | extracellular, plasma membrane | 12.78 | 24.14 |
| CDY09477 | Canola | nucleus | 8.92 | 23.66 |
| CDX69426 | Canola | endoplasmic reticulum, golgi, plastid | 25.36 | 18.27 |
| CDY16985 | Canola | endoplasmic reticulum, golgi | 24.95 | 18.11 |
| CDY14078 | Canola | nucleus | 12.98 | 16.58 |
| CDX96274 | Canola | mitochondrion | 23.73 | 15.9 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 22.52 | 15.61 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 22.72 | 15.53 |
| CDX98935 | Canola | nucleus | 12.58 | 15.2 |
| CDY70407 | Canola | peroxisome | 11.36 | 15.18 |
| CDY04993 | Canola | nucleus | 12.58 | 15.12 |
| CDY29652 | Canola | endoplasmic reticulum | 22.31 | 15.09 |
| CDX78259 | Canola | nucleus | 12.37 | 15.02 |
| CDY28219 | Canola | cytosol | 8.92 | 14.97 |
| CDY11550 | Canola | mitochondrion | 23.94 | 14.79 |
| CDY02887 | Canola | cytosol, nucleus, peroxisome | 11.36 | 14.78 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.17 | 14.76 |
| CDX88641 | Canola | nucleus | 3.65 | 14.75 |
| CDY34794 | Canola | nucleus | 9.74 | 14.72 |
| CDX68698 | Canola | cytosol | 8.72 | 14.63 |
| CDX76832 | Canola | nucleus | 9.53 | 14.6 |
| CDX70091 | Canola | nucleus | 12.58 | 14.52 |
| CDX73453 | Canola | nucleus | 12.17 | 14.49 |
| CDY13389 | Canola | nucleus | 11.76 | 14.43 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 22.11 | 14.29 |
| CDX67607 | Canola | peroxisome | 12.17 | 14.29 |
| CDY08489 | Canola | nucleus | 11.16 | 14.21 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 26.77 | 13.79 |
| CDX93536 | Canola | extracellular, vacuole | 26.77 | 13.69 |
| CDY18267 | Canola | endoplasmic reticulum, plasma membrane | 14.4 | 13.63 |
| CDX89779 | Canola | endoplasmic reticulum, extracellular | 14.2 | 13.44 |
| CDX76130 | Canola | cytosol | 10.75 | 13.32 |
| CDY01147 | Canola | extracellular, golgi, vacuole | 14.6 | 13.02 |
| CDX72271 | Canola | nucleus | 10.14 | 12.95 |
| CDY67532 | Canola | nucleus | 10.95 | 12.95 |
| CDY07526 | Canola | nucleus | 7.51 | 12.85 |
| CDY01064 | Canola | nucleus | 11.36 | 12.56 |
| CDY68842 | Canola | vacuole | 14.2 | 12.43 |
| CDY31127 | Canola | cytosol | 16.02 | 12.15 |
| CDY02772 | Canola | nucleus | 8.72 | 11.75 |
| CDY32744 | Canola | nucleus | 8.52 | 11.48 |
| CDY51277 | Canola | nucleus | 8.32 | 11.14 |
| CDY50792 | Canola | nucleus | 8.32 | 11.14 |
| CDX88643 | Canola | nucleus | 5.07 | 10.5 |
| CDY11846 | Canola | nucleus | 4.87 | 10.08 |
| CDY07525 | Canola | peroxisome | 1.62 | 8.33 |
Protein Annotations
| EnsemblPlants:CDX68162 | EnsemblPlantsGene:GSBRNA2T00099416001 | GO:A0A078BVF9 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil |
| PANTHER:PTHR31448 | PANTHER:PTHR31448:SF9 | PFAM:PF04576 | PFscan:PS51775 | ProteinID:CDX68162 | ProteinID:CDX68162.1 |
| SEG:seg | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0004EDD020 | MapMan:20.2.4.3 | : |
Description
BnaA07g22020D
Coordinates
chrLK031787:+:4196068..4197549
Molecular Weight (calculated)
55867.9 Da
IEP (calculated)
4.598
GRAVY (calculated)
-0.265
Length
493 amino acids
Sequence
(BLAST)
(BLAST)
001: MIIQLLCFFL FLFLLLQVTM LKRSFKNFVE QELGSLPQFL IYTLLELTLI TILFIDGALA FISNQYARFF ELNTPCLLCT RIDHVLVPRN PHFYYNDSIC
101: DSHKKKVSSL AYCHVHKKLS EIKHMCEGCL LSFATEKESD CDTYKSLIGI LHKDLELLID EQVLALALKK EDDLVQTTTN LVDYKTNNNI SLKQHCSCCG
201: DLLKNNSSFL APAPSPRVPY NKLSENESEF RVLDVDRTLS GVRGGNKFFG TPLRKLPLDK TENISDMADS NGESILNQLK KEDCLEKKSL MDLYMELDEE
301: RSASAVAANN AMAMITKLQA EKATVQMEAL QCQRMMDEQA EYDQEALQSL SSELAKREED MKELEDELEA YRETYGCLTD KDDVRGEFLE EHVNANVVCY
401: SNHEDNGANI DQSGSCKSEE LRFLGQMKGA ESKEGIVKEL TEITERLSAL QSNGELLKHI ADVLEVSEGE AILMQISQNL HMLRSFVAMP SES
101: DSHKKKVSSL AYCHVHKKLS EIKHMCEGCL LSFATEKESD CDTYKSLIGI LHKDLELLID EQVLALALKK EDDLVQTTTN LVDYKTNNNI SLKQHCSCCG
201: DLLKNNSSFL APAPSPRVPY NKLSENESEF RVLDVDRTLS GVRGGNKFFG TPLRKLPLDK TENISDMADS NGESILNQLK KEDCLEKKSL MDLYMELDEE
301: RSASAVAANN AMAMITKLQA EKATVQMEAL QCQRMMDEQA EYDQEALQSL SSELAKREED MKELEDELEA YRETYGCLTD KDDVRGEFLE EHVNANVVCY
401: SNHEDNGANI DQSGSCKSEE LRFLGQMKGA ESKEGIVKEL TEITERLSAL QSNGELLKHI ADVLEVSEGE AILMQISQNL HMLRSFVAMP SES
001: MYIQLLCFFL FLFLLLQATM SKRSFKKFVE QELGSLPHFL IYTVLEWSLI VFLFIDGVIA FLSNQFAKFF DLNIPCLLCT RIDHILVPRD PQFYYNESIC
101: DSHKKKVSSL AYCHVHKKLS EIKHMCEGCL LSFATEKDSD CDTYKSLIGI LHKDLELLID DERDLPLAFK KDDNLVQTTK NLVDYKTNNI KNDSLKQHCS
201: CCGELLKIKS EKLPKNNNSF LAPAPSPRVS HNKLSENESE FKDMDVDRTP SFVRGGNKFF GIPLSDSAQN SPRWSVRSLK KSVLNKTENA SDTTDPTGES
301: ILNQLKKEVR LDKKSLIDLY MELDEERSAS AVAANEAMAM ITRLQAEKAA VQMEALQYQR MMDEQAEYDQ EALQSMSSEL AKREEEMKEL EAEFEVYREK
401: YGCLTDQEDA REEFHKQNGN ASAYDDCQET KPVSDLAVSS SNQQENGENI DQNGQSKRSE ESTAENVVSA DEEKGSESKE GIVKELSEIT ERLSTLQSNG
501: DLLKHIADVL DVSEGEAILL QISQNLHMLR SFVAMPSESM NL
101: DSHKKKVSSL AYCHVHKKLS EIKHMCEGCL LSFATEKDSD CDTYKSLIGI LHKDLELLID DERDLPLAFK KDDNLVQTTK NLVDYKTNNI KNDSLKQHCS
201: CCGELLKIKS EKLPKNNNSF LAPAPSPRVS HNKLSENESE FKDMDVDRTP SFVRGGNKFF GIPLSDSAQN SPRWSVRSLK KSVLNKTENA SDTTDPTGES
301: ILNQLKKEVR LDKKSLIDLY MELDEERSAS AVAANEAMAM ITRLQAEKAA VQMEALQYQR MMDEQAEYDQ EALQSMSSEL AKREEEMKEL EAEFEVYREK
401: YGCLTDQEDA REEFHKQNGN ASAYDDCQET KPVSDLAVSS SNQQENGENI DQNGQSKRSE ESTAENVVSA DEEKGSESKE GIVKELSEIT ERLSTLQSNG
501: DLLKHIADVL DVSEGEAILL QISQNLHMLR SFVAMPSESM NL
Arabidopsis Description
MYOB6Probable myosin-binding protein 6 [Source:UniProtKB/Swiss-Prot;Acc:F4HVS6]
SUBAcon: [extracellular,golgi,vacuole]
SUBAcon: [extracellular,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.