Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 6
- extracellular 6
- vacuole 5
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85859 | Canola | extracellular, plasma membrane, vacuole | 73.62 | 80.93 |
| Bra003783.1-P | Field mustard | extracellular, plasma membrane | 70.66 | 80.8 |
| CDY45396 | Canola | extracellular, golgi, vacuole | 80.44 | 80.44 |
| CDX68162 | Canola | extracellular, plasma membrane, vacuole | 73.06 | 80.32 |
| CDX73116 | Canola | extracellular, golgi, vacuole | 80.81 | 79.49 |
| Bra015891.1-P | Field mustard | endoplasmic reticulum, golgi | 78.04 | 77.9 |
| AT1G18990.1 | Thale cress | endoplasmic reticulum, plasma membrane | 64.02 | 66.22 |
| PGSC0003DMT400030876 | Potato | endoplasmic reticulum, extracellular | 44.65 | 46.72 |
| Solyc12g027730.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 43.91 | 45.86 |
| KRH54475 | Soybean | endoplasmic reticulum | 49.26 | 44.35 |
| KRH63445 | Soybean | endoplasmic reticulum | 49.45 | 43.58 |
| PGSC0003DMT400083120 | Potato | endoplasmic reticulum | 44.65 | 40.47 |
| Solyc03g113600.2.1 | Tomato | golgi | 44.1 | 39.97 |
| PGSC0003DMT400062848 | Potato | golgi | 44.1 | 39.9 |
| VIT_17s0000g05320.t01 | Wine grape | endoplasmic reticulum, golgi | 45.57 | 39.77 |
| Solyc06g071190.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 45.76 | 38.81 |
| AT4G13160.1 | Thale cress | endoplasmic reticulum | 11.07 | 21.28 |
| AT5G16720.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 25.83 | 20.74 |
| AT1G70750.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion | 22.14 | 16.02 |
| AT2G30690.2 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 22.14 | 15.79 |
| AT2G24140.2 | Thale cress | nucleus | 8.67 | 14.51 |
| AT4G30830.1 | Thale cress | nucleus | 9.41 | 14.05 |
| AT5G06560.1 | Thale cress | nucleus | 12.92 | 13.51 |
| AT3G54740.3 | Thale cress | cytosol, nucleus, peroxisome | 10.89 | 13.47 |
| AT1G04890.1 | Thale cress | mitochondrion | 10.15 | 13.38 |
| AT4G13630.1 | Thale cress | extracellular, golgi | 13.84 | 13.18 |
| AT5G57830.1 | Thale cress | nucleus | 8.86 | 12.4 |
| AT1G08800.1 | Thale cress | extracellular, vacuole | 25.46 | 12.4 |
| AT3G11850.2 | Thale cress | nucleus | 10.7 | 11.51 |
Protein Annotations
| MapMan:20.2.4.3 | EntrezGene:843822 | ProteinID:AAD55293.1 | ProteinID:AAG51939.1 | ProteinID:AEE35636.1 | EMBL:AK118172 |
| ArrayExpress:AT1G74830 | EnsemblPlantsGene:AT1G74830 | RefSeq:AT1G74830 | TAIR:AT1G74830 | RefSeq:AT1G74830-TAIR-G | EnsemblPlants:AT1G74830.1 |
| TAIR:AT1G74830.1 | ncoils:Coil | UniProt:F4HVS6 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0017022 | InterPro:GTD-bd |
| InterPro:IPR007656 | RefSeq:NP_177621.2 | PFAM:PF04576 | PFscan:PS51775 | PANTHER:PTHR31448 | PANTHER:PTHR31448:SF9 |
| SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI000019719A | SEG:seg | : | : |
Description
MYOB6Probable myosin-binding protein 6 [Source:UniProtKB/Swiss-Prot;Acc:F4HVS6]
Coordinates
chr1:-:28113194..28115281
Molecular Weight (calculated)
61610.9 Da
IEP (calculated)
4.693
GRAVY (calculated)
-0.481
Length
542 amino acids
Sequence
(BLAST)
(BLAST)
001: MYIQLLCFFL FLFLLLQATM SKRSFKKFVE QELGSLPHFL IYTVLEWSLI VFLFIDGVIA FLSNQFAKFF DLNIPCLLCT RIDHILVPRD PQFYYNESIC
101: DSHKKKVSSL AYCHVHKKLS EIKHMCEGCL LSFATEKDSD CDTYKSLIGI LHKDLELLID DERDLPLAFK KDDNLVQTTK NLVDYKTNNI KNDSLKQHCS
201: CCGELLKIKS EKLPKNNNSF LAPAPSPRVS HNKLSENESE FKDMDVDRTP SFVRGGNKFF GIPLSDSAQN SPRWSVRSLK KSVLNKTENA SDTTDPTGES
301: ILNQLKKEVR LDKKSLIDLY MELDEERSAS AVAANEAMAM ITRLQAEKAA VQMEALQYQR MMDEQAEYDQ EALQSMSSEL AKREEEMKEL EAEFEVYREK
401: YGCLTDQEDA REEFHKQNGN ASAYDDCQET KPVSDLAVSS SNQQENGENI DQNGQSKRSE ESTAENVVSA DEEKGSESKE GIVKELSEIT ERLSTLQSNG
501: DLLKHIADVL DVSEGEAILL QISQNLHMLR SFVAMPSESM NL
101: DSHKKKVSSL AYCHVHKKLS EIKHMCEGCL LSFATEKDSD CDTYKSLIGI LHKDLELLID DERDLPLAFK KDDNLVQTTK NLVDYKTNNI KNDSLKQHCS
201: CCGELLKIKS EKLPKNNNSF LAPAPSPRVS HNKLSENESE FKDMDVDRTP SFVRGGNKFF GIPLSDSAQN SPRWSVRSLK KSVLNKTENA SDTTDPTGES
301: ILNQLKKEVR LDKKSLIDLY MELDEERSAS AVAANEAMAM ITRLQAEKAA VQMEALQYQR MMDEQAEYDQ EALQSMSSEL AKREEEMKEL EAEFEVYREK
401: YGCLTDQEDA REEFHKQNGN ASAYDDCQET KPVSDLAVSS SNQQENGENI DQNGQSKRSE ESTAENVVSA DEEKGSESKE GIVKELSEIT ERLSTLQSNG
501: DLLKHIADVL DVSEGEAILL QISQNLHMLR SFVAMPSESM NL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.