Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72271 | Canola | nucleus | 84.83 | 88.34 |
| CDY28219 | Canola | cytosol | 56.72 | 77.55 |
| CDX68698 | Canola | cytosol | 56.72 | 77.55 |
| AT4G30830.1 | Thale cress | nucleus | 66.67 | 73.83 |
| CDY34794 | Canola | nucleus | 45.02 | 55.52 |
| CDX76832 | Canola | nucleus | 43.53 | 54.35 |
| CDX88641 | Canola | nucleus | 10.7 | 35.25 |
| CDX88643 | Canola | nucleus | 17.41 | 29.41 |
| CDY11846 | Canola | nucleus | 17.16 | 28.99 |
| CDY50792 | Canola | nucleus | 26.12 | 28.53 |
| CDY02772 | Canola | nucleus | 25.87 | 28.42 |
| VIT_11s0037g00610.t01 | Wine grape | nucleus | 33.08 | 28.36 |
| CDY32744 | Canola | nucleus | 25.62 | 28.14 |
| CDY51277 | Canola | nucleus | 25.62 | 27.99 |
| KRH55008 | Soybean | cytosol | 10.7 | 26.71 |
| KRH37764 | Soybean | nucleus | 29.85 | 26.2 |
| KRH12784 | Soybean | nucleus | 29.1 | 25.66 |
| KRH63109 | Soybean | nucleus | 28.36 | 24.73 |
| Solyc07g005910.2.1 | Tomato | nucleus | 27.36 | 24.28 |
| PGSC0003DMT400028965 | Potato | nucleus | 27.11 | 24.06 |
| PGSC0003DMT400023950 | Potato | nucleus | 26.37 | 23.82 |
| KRH72337 | Soybean | nucleus | 27.11 | 23.24 |
| KRH03013 | Soybean | nucleus | 26.37 | 22.36 |
| Solyc11g020850.1.1 | Tomato | nucleus | 26.37 | 20.19 |
| Os08t0269000-01 | Rice | cytosol, golgi, nucleus | 13.93 | 19.31 |
| CDY01114 | Canola | extracellular, plasma membrane | 11.94 | 18.39 |
| CDY47332 | Canola | extracellular, plasma membrane | 11.94 | 18.39 |
| TraesCS5B01G405000.1 | Wheat | nucleus | 16.67 | 17.77 |
| TraesCS5A01G400200.1 | Wheat | nucleus | 16.67 | 17.68 |
| CDY14078 | Canola | nucleus | 16.92 | 17.62 |
| TraesCS5D01G410200.1 | Wheat | nucleus | 16.42 | 17.41 |
| Os08t0442350-01 | Rice | nucleus | 21.14 | 17.07 |
| TraesCS7D01G282800.1 | Wheat | nucleus | 18.41 | 16.97 |
| TraesCS7A01G285400.1 | Wheat | nucleus | 18.66 | 16.93 |
| TraesCS7B01G199800.1 | Wheat | nucleus | 18.41 | 16.7 |
| Zm00001d024102_P002 | Maize | nucleus | 14.68 | 16.67 |
| CDY02887 | Canola | cytosol, nucleus, peroxisome | 15.67 | 16.62 |
| CDX76130 | Canola | cytosol | 16.17 | 16.33 |
| CDX98935 | Canola | nucleus | 16.42 | 16.18 |
| CDY09477 | Canola | nucleus | 7.46 | 16.13 |
| CDY04993 | Canola | nucleus | 16.42 | 16.1 |
| GSMUA_Achr10P... | Banana | nucleus | 18.66 | 15.56 |
| CDX70091 | Canola | nucleus | 16.42 | 15.46 |
| CDX78259 | Canola | nucleus | 15.42 | 15.27 |
| OQU80230 | Sorghum | cytosol | 15.17 | 15.25 |
| HORVU5Hr1G097200.5 | Barley | cytosol | 16.17 | 15.19 |
| CDX67607 | Canola | peroxisome | 15.67 | 15.0 |
| CDX73453 | Canola | nucleus | 15.42 | 14.98 |
| OQU80548 | Sorghum | nucleus | 19.65 | 14.96 |
| Solyc12g009900.1.1 | Tomato | cytosol | 23.38 | 14.76 |
| CDY08489 | Canola | nucleus | 13.93 | 14.47 |
| CDY01064 | Canola | nucleus | 15.67 | 14.13 |
| CDY67532 | Canola | nucleus | 14.43 | 13.91 |
| CDY07526 | Canola | nucleus | 9.95 | 13.89 |
| CDY70407 | Canola | peroxisome | 12.19 | 13.28 |
| PGSC0003DMT400020469 | Potato | cytosol | 22.39 | 12.97 |
| CDX68162 | Canola | extracellular, plasma membrane, vacuole | 14.43 | 11.76 |
| Zm00001d032145_P001 | Maize | nucleus | 17.91 | 11.63 |
| CDX85859 | Canola | extracellular, plasma membrane, vacuole | 14.18 | 11.56 |
| CDY18267 | Canola | endoplasmic reticulum, plasma membrane | 14.93 | 11.52 |
| CDY01147 | Canola | extracellular, golgi, vacuole | 15.67 | 11.39 |
| CDX89779 | Canola | endoplasmic reticulum, extracellular | 14.68 | 11.32 |
| CDY68842 | Canola | vacuole | 15.17 | 10.83 |
| CDY45396 | Canola | extracellular, golgi, vacuole | 14.43 | 10.7 |
| CDY26705 | Canola | endoplasmic reticulum, plasma membrane, plastid | 13.43 | 10.42 |
| CDY21687 | Canola | endoplasmic reticulum, vacuole | 13.18 | 10.37 |
| CDX73116 | Canola | extracellular, golgi, vacuole | 14.18 | 10.34 |
| CDX81908 | Canola | endoplasmic reticulum, vacuole | 12.69 | 10.22 |
| CDY19266 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 13.18 | 10.17 |
| CDX96274 | Canola | mitochondrion | 16.17 | 8.83 |
| CDY16985 | Canola | endoplasmic reticulum, golgi | 14.43 | 8.54 |
| CDX69426 | Canola | endoplasmic reticulum, golgi, plastid | 14.43 | 8.48 |
| CDY11550 | Canola | mitochondrion | 15.92 | 8.02 |
| CDY31127 | Canola | cytosol | 11.44 | 7.08 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 12.19 | 6.89 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 12.19 | 6.8 |
| CDY29652 | Canola | endoplasmic reticulum | 11.94 | 6.58 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 11.94 | 6.29 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 13.68 | 5.75 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 12.44 | 5.72 |
| CDX93536 | Canola | extracellular, vacuole | 13.68 | 5.71 |
| CDY07525 | Canola | peroxisome | 1.24 | 5.21 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 1.99 | 4.04 |
Protein Annotations
| EnsemblPlants:CDY13389 | EnsemblPlantsGene:GSBRNA2T00077654001 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil | PANTHER:PTHR31422 |
| PANTHER:PTHR31422:SF1 | PFAM:PF04576 | PFscan:PS51775 | ProteinID:CDY13389 | ProteinID:CDY13389.1 | SEG:seg |
| UniParc:UPI0004EDFE5E | UniProt:A0A078FK88 | MapMan:35.2 | : | : | : |
Description
BnaA03g51070DBnaA03g51070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FK88]
Coordinates
chrLK032035:-:7861..9777
Molecular Weight (calculated)
45831.3 Da
IEP (calculated)
4.826
GRAVY (calculated)
-0.646
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MFTDTSLTAN QSLTRDKKKK SATVGPTGTN TWPSLPLFKD IKLVITLIGS ASSSITAPLL LQPLRDMVER SHSFKLPGAE INDLRMALYE RKEVVERLQD
101: ELDAEREASA TSASEAMSMI LRLQGEKAEL AMEAGQYKRI VEEEMSHAEM SFALLEDFIY QKEVEITALE HQVEVYRSQL MSLGYSDLIS LDDVKLQGSL
201: SDRSQTPSPE LVDDLSIPVE KEVIEQSLDS QKSSLDVYWE QIKKLDEQVK ELTHFRDSMQ YKSSMSESRV NKREEDVASS SKGLFKSEET LVIKVAKQTK
301: MDKKSPKQTR DRSGKRNRGE YQAELQRLRQ RVDRLERERT KTEPETSGVV KEEETSLVRE TKEEVSSVQS SEVKSSNTVE NLQPWIDPAI LSIQEAMLYF
401: WL
101: ELDAEREASA TSASEAMSMI LRLQGEKAEL AMEAGQYKRI VEEEMSHAEM SFALLEDFIY QKEVEITALE HQVEVYRSQL MSLGYSDLIS LDDVKLQGSL
201: SDRSQTPSPE LVDDLSIPVE KEVIEQSLDS QKSSLDVYWE QIKKLDEQVK ELTHFRDSMQ YKSSMSESRV NKREEDVASS SKGLFKSEET LVIKVAKQTK
301: MDKKSPKQTR DRSGKRNRGE YQAELQRLRQ RVDRLERERT KTEPETSGVV KEEETSLVRE TKEEVSSVQS SEVKSSNTVE NLQPWIDPAI LSIQEAMLYF
401: WL
001: MVERSRSFRI PGAETNDLRI ALYERKEVIE RLQEELNAER EASETSANEA MSMILRLQGE KAELAMEADQ YKRMVEEQMS HAEMSFALLE DVIYQKEIEV
101: TALAYQVEVY RSQLLSLGFN DLKSLDVKLQ EDDDQDENML KMNDFSLSDR SQTPSPELVT DLSIPEEKEV IEQSLESQKS SLDVYWEQIK KLNEQVKELT
201: GFRDSMRDQH RTSVSESRGE EDFASSSNFQ EVTQERKKEA KGLSKTTDDT MMIKVSKQTK MEKKPSKQTR DRSGKRNRAE YQAELQRLRQ RVERLERGKS
301: NTEPETSGVI KQEEISLLKE VKEELSSVQS SDVKKSLNTM ENLQPWVDPT IISVQEAMLY FWL
101: TALAYQVEVY RSQLLSLGFN DLKSLDVKLQ EDDDQDENML KMNDFSLSDR SQTPSPELVT DLSIPEEKEV IEQSLESQKS SLDVYWEQIK KLNEQVKELT
201: GFRDSMRDQH RTSVSESRGE EDFASSSNFQ EVTQERKKEA KGLSKTTDDT MMIKVSKQTK MEKKPSKQTR DRSGKRNRAE YQAELQRLRQ RVERLERGKS
301: NTEPETSGVI KQEEISLLKE VKEELSSVQS SDVKKSLNTM ENLQPWVDPT IISVQEAMLY FWL
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q1PE31]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.