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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 6
  • plasma membrane 4
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY01147 Canola extracellular, golgi, vacuole 84.19 85.71
AT4G13630.1 Thale cress extracellular, golgi 69.09 68.37
CDY01114 Canola extracellular, plasma membrane 19.18 41.38
CDY47332 Canola extracellular, plasma membrane 19.18 41.38
CDY18267 Canola endoplasmic reticulum, plasma membrane 30.55 33.01
CDX89779 Canola endoplasmic reticulum, extracellular 30.2 32.63
GSMUA_Achr6P06580_001 Banana nucleus 15.1 28.43
VIT_05s0029g00110.t01 Wine grape endoplasmic reticulum, golgi 38.9 27.48
GSMUA_Achr3P17210_001 Banana endoplasmic reticulum, plasma membrane, vacuole 27.35 25.2
TraesCS2D01G272500.1 Wheat plastid 20.43 23.71
TraesCS2B01G291300.1 Wheat plastid 20.25 23.51
TraesCS2A01G273300.1 Wheat plastid 20.07 23.3
CDX88641 Canola nucleus 4.97 22.95
Zm00001d032786_P001 Maize plastid 16.16 22.14
Zm00001d014088_P001 Maize plastid 19.01 21.62
OQU91677 Sorghum endoplasmic reticulum, golgi 18.12 21.25
CDY09477 Canola nucleus 6.57 19.89
CDY70407 Canola peroxisome 11.9 18.16
CDY07526 Canola nucleus 9.24 18.06
CDY14078 Canola nucleus 12.26 17.88
CDY08489 Canola nucleus 12.08 17.57
CDX78259 Canola nucleus 12.61 17.49
CDY02887 Canola cytosol, nucleus, peroxisome 11.72 17.41
CDX73453 Canola nucleus 12.79 17.39
CDX67607 Canola peroxisome 12.97 17.38
CDY04993 Canola nucleus 12.43 17.07
HORVU2Hr1G066690.6 Barley cytosol, mitochondrion 13.32 16.93
CDY34794 Canola nucleus 9.77 16.87
CDX76130 Canola cytosol 11.9 16.83
CDX98935 Canola nucleus 12.08 16.67
CDY28219 Canola cytosol 8.7 16.67
CDX70091 Canola nucleus 12.61 16.63
CDX76832 Canola nucleus 9.41 16.46
CDX68698 Canola cytosol 8.53 16.33
CDY01064 Canola nucleus 12.61 15.92
CDY32744 Canola nucleus 10.12 15.57
CDY02772 Canola nucleus 9.95 15.3
CDY13389 Canola nucleus 10.83 15.17
CDX72271 Canola nucleus 10.3 15.03
CDY67532 Canola nucleus 11.01 14.87
CDY51277 Canola nucleus 9.41 14.4
CDY50792 Canola nucleus 9.41 14.4
CDX88643 Canola nucleus 6.04 14.29
CDX68162 Canola extracellular, plasma membrane, vacuole 12.43 14.2
CDX85859 Canola extracellular, plasma membrane, vacuole 12.43 14.2
CDY11846 Canola nucleus 5.86 13.87
CDY21687 Canola endoplasmic reticulum, vacuole 12.08 13.31
CDX81908 Canola endoplasmic reticulum, vacuole 11.55 13.03
CDY26705 Canola endoplasmic reticulum, plasma membrane, plastid 11.55 12.55
CDY45396 Canola extracellular, golgi, vacuole 12.08 12.55
CDX73116 Canola extracellular, golgi, vacuole 12.26 12.52
CDY19266 Canola endoplasmic reticulum, nucleus, plasma membrane 11.55 12.48
CDX96274 Canola mitochondrion 15.63 11.96
CDY11550 Canola mitochondrion 15.45 10.9
CDX69426 Canola endoplasmic reticulum, golgi, plastid 12.61 10.38
CDY16985 Canola endoplasmic reticulum, golgi 12.43 10.31
CDY47125 Canola endoplasmic reticulum, plasma membrane 11.9 9.29
CDY29652 Canola endoplasmic reticulum 11.9 9.19
CDY10753 Canola endoplasmic reticulum, plasma membrane 11.55 9.14
CDY67896 Canola endoplasmic reticulum, vacuole 11.72 8.65
CDY31127 Canola cytosol 9.41 8.15
CDY32134 Canola endoplasmic reticulum, plasma membrane, vacuole 12.43 8.01
CDY31126 Canola endoplasmic reticulum, mitochondrion, plastid, vacuole 2.66 7.58
CDX93536 Canola extracellular, vacuole 12.08 7.05
CDX95032 Canola endoplasmic reticulum, vacuole 11.9 7.0
CDY07525 Canola peroxisome 0.89 5.21
Protein Annotations
EnsemblPlants:CDY68842EnsemblPlantsGene:GSBRNA2T00080412001InterPro:GTD-bdInterPro:IPR007656ncoils:CoilPANTHER:PTHR31422
PANTHER:PTHR31422:SF3PFAM:PF04576PFscan:PS51775ProteinID:CDY68842ProteinID:CDY68842.1SEG:seg
TMHMM:TMhelixUniParc:UPI0004EEBC19UniProt:A0A078JTT7MapMan:35.2::
Description
BnaAnng28530DBnaAnng28530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JTT7]
Coordinates
chrLK038109:+:1428..3997
Molecular Weight (calculated)
62964.4 Da
IEP (calculated)
5.495
GRAVY (calculated)
-0.617
Length
563 amino acids
Sequence
(BLAST)
001: MRCHEVKSWT FSGLVAAFLD LSVAFSLLCA SSLVYLTSKL LGVFGLNLPC PCDGLFSDPP HKNKCFQETL VNLPVKKISS VQRSVISTTP FDSLPFNEAN
101: GGECGGKKRK GERSRHVEFE KEVVFRTPEA ENASCFDLLT SQSLKKGTFK VKSKRLSFHR SPYGCQSKHS PQSPASVMEY LNDAEENHPL LVNSKDGGKD
201: LEDVPLKKKR TLSWAGEGTC TSPVDLTQKP IEQVLAEERA SRAALALELE KERNAAATAA DEALSMILRL QEEKASIEME ARQYQRMIEE KSAFDAEEMS
301: ILKEILLRRE REKHFLEKEV DTYRQMFLET EQPLPNTPDS KQPTEESQTP QQTTDSFGSE MFTNQMDSRI LDYENVDSPK PGEVANDGEM KQEGEEGTLF
401: SEPVAEFKKV GEDSGDIDCC VHDIHVVKDE DNKVQLNVPS DHVVRDLKLD RSQSVLGTSY GLPPACPQGR RIVSPNMRRN SMSAVDYERL KIESEVGLLR
501: GRLRAVQKGR DNISFSSKEQ SKSVLGDKTS RFWEARRSEP IDSSSPSSTM VKAMSMSLDL HSA
Best Arabidopsis Sequence Match ( AT4G13630.2 )
(BLAST)
001: MRCQEVKSWT FKGLVAAFID LSVAFSLLCA SFIVYVTSKF LGLFGLDLPC PCDGLYSECF QESLRNLPVK KISSVQRSVK NRTPFDSILY NGGKKRKCER
101: RRVQLEDEVS STTPSVGKFE NKASGFDLLT AQSLKKGSFK VKSKRLSFHR SPYGFKNHYQ SCLGLKSFEG SYDENDPLLV NSNDSGKALE DVSLRKSVSL
201: SSVGCGVGEG ACSSPGMVQR TVEMSEQVLG EERAARASLA LELEKERNAA ASAADEALGM ILRLQEEKAS IEMEARQYQR MIEEKSAFDA EEMSILKEIL
301: LRREREKHFL EKEVDTYRQM FLETEQPHNT PDSKPAQIER LQTPQQITEP WDDMETVNVS SGFEIFTNQM DNTECDQSRS EPFDALSDIE LKEREEGETL
401: YAELVSRTSD IAVSKKLCED PHDIDCHVHD IHVVTDEDNK GQLNVPSDHA TQDLKLDRSQ SVSDTSYAFP QGKSNMSTNM RRNSMSAIDY ERLKIESEVG
501: LLRGRLRAVQ KGREKISFSS KDQSKSQVQR CGDKTSRFWE ARRSGHLDSS SPSSTMVKAM SMPLDLHSA
Arabidopsis Description
Protein of unknown function, DUF593 [Source:TAIR;Acc:AT4G13630]
SUBAcon: [golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.