Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04993 | Canola | nucleus | 90.93 | 85.61 |
| CDX70091 | Canola | nucleus | 69.43 | 62.76 |
| CDX98935 | Canola | nucleus | 65.54 | 62.01 |
| CDY08489 | Canola | nucleus | 54.92 | 54.78 |
| AT5G06560.1 | Thale cress | nucleus | 72.8 | 54.25 |
| CDY07525 | Canola | peroxisome | 13.21 | 53.12 |
| CDY67532 | Canola | nucleus | 55.18 | 51.08 |
| CDY01064 | Canola | nucleus | 58.29 | 50.45 |
| VIT_08s0032g00720.t01 | Wine grape | plastid | 61.4 | 45.58 |
| KRH68055 | Soybean | cytosol | 51.81 | 42.73 |
| CDX76130 | Canola | cytosol | 43.78 | 42.46 |
| CDX78259 | Canola | nucleus | 43.52 | 41.38 |
| CDX67607 | Canola | peroxisome | 44.82 | 41.19 |
| CDY70407 | Canola | peroxisome | 39.12 | 40.92 |
| CDY02887 | Canola | cytosol, nucleus, peroxisome | 40.16 | 40.9 |
| CDX73453 | Canola | nucleus | 43.52 | 40.58 |
| KRG96316 | Soybean | cytosol | 48.19 | 32.07 |
| CDY07526 | Canola | nucleus | 23.58 | 31.6 |
| CDX88641 | Canola | nucleus | 7.77 | 24.59 |
| CDY50792 | Canola | nucleus | 20.47 | 21.47 |
| CDY51277 | Canola | nucleus | 20.21 | 21.2 |
| CDX88643 | Canola | nucleus | 12.95 | 21.01 |
| CDY32744 | Canola | nucleus | 19.43 | 20.49 |
| CDX68698 | Canola | cytosol | 15.54 | 20.41 |
| CDY02772 | Canola | nucleus | 19.17 | 20.22 |
| CDY11846 | Canola | nucleus | 12.44 | 20.17 |
| CDY28219 | Canola | cytosol | 15.29 | 20.07 |
| CDY47332 | Canola | extracellular, plasma membrane | 13.21 | 19.54 |
| CDY34794 | Canola | nucleus | 16.32 | 19.33 |
| CDX76832 | Canola | nucleus | 16.06 | 19.25 |
| CDY01114 | Canola | extracellular, plasma membrane | 12.95 | 19.16 |
| CDX72271 | Canola | nucleus | 17.36 | 17.36 |
| CDY09477 | Canola | nucleus | 8.29 | 17.2 |
| CDY13389 | Canola | nucleus | 17.62 | 16.92 |
| CDY26705 | Canola | endoplasmic reticulum, plasma membrane, plastid | 18.91 | 14.09 |
| CDX89779 | Canola | endoplasmic reticulum, extracellular | 18.91 | 14.01 |
| CDY19266 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 18.91 | 14.01 |
| CDY18267 | Canola | endoplasmic reticulum, plasma membrane | 18.65 | 13.82 |
| CDY21687 | Canola | endoplasmic reticulum, vacuole | 17.62 | 13.31 |
| CDX85859 | Canola | extracellular, plasma membrane, vacuole | 16.84 | 13.18 |
| CDX81908 | Canola | endoplasmic reticulum, vacuole | 16.84 | 13.03 |
| CDX68162 | Canola | extracellular, plasma membrane, vacuole | 16.58 | 12.98 |
| CDY45396 | Canola | extracellular, golgi, vacuole | 17.36 | 12.36 |
| CDY01147 | Canola | extracellular, golgi, vacuole | 17.62 | 12.3 |
| CDY68842 | Canola | vacuole | 17.88 | 12.26 |
| CDX73116 | Canola | extracellular, golgi, vacuole | 17.1 | 11.98 |
| CDY16985 | Canola | endoplasmic reticulum, golgi | 19.69 | 11.19 |
| CDX69426 | Canola | endoplasmic reticulum, golgi, plastid | 19.69 | 11.11 |
| CDX96274 | Canola | mitochondrion | 18.91 | 9.92 |
| CDY11550 | Canola | mitochondrion | 19.17 | 9.27 |
| CDY31127 | Canola | cytosol | 14.77 | 8.77 |
| CDY29652 | Canola | endoplasmic reticulum | 14.25 | 7.54 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 13.73 | 7.45 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 13.73 | 7.35 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 16.58 | 7.32 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 14.25 | 7.21 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 17.1 | 6.9 |
| CDX93536 | Canola | extracellular, vacuole | 17.1 | 6.85 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 1.04 | 2.02 |
Protein Annotations
| EnsemblPlants:CDY14078 | EnsemblPlantsGene:GSBRNA2T00078614001 | GO:A0A078FP27 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil | PANTHER:PTHR31422 | PANTHER:PTHR31422:SF0 | PFAM:PF04576 |
| PFscan:PS51775 | ProteinID:CDY14078 | ProteinID:CDY14078.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EC1D74 |
| UniProt:A0A078FP27 | MapMan:35.1 | : | : | : | : |
Description
BnaC02g01950DBnaC02g01950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FP27]
Coordinates
chrLK032040:+:318982..320322
Molecular Weight (calculated)
44724.7 Da
IEP (calculated)
5.021
GRAVY (calculated)
-0.713
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTLTCCDCG CEDCSSHKHD EFSNNEPRDA RDLSLSLSLS ISSNAKVQIE NECHLLRETV ASQRESIQDL YSELDEERNA ASTAANEAMS MILRLQREKA
101: EVEMELRQFK RFSEEKMEHD RQELLALEDL VYKREQTIQA LTFEAQAYRH RMMSYGFSED AEVDDDDVEK NVYDYYDYPP LKCSLNEVVV DDVEKYTLTD
201: SPRGGDNLRI SQSPKRHRHF RKVSTDFSVD SPRSNGEMHD RVYTIDSVHQ GGEEKVMDDG EMNQPGVGDP DIVKLYARMQ ALEADRESMR QAIVSMRTEK
301: AQMVLLKEIA QHLSKEVVLE RRQASIGGVF SFLSVFKWIT SFVFWRKKAR RSKYMNVVQA NNMGLEMLLE KTPRTRQWRC LSSTQV
101: EVEMELRQFK RFSEEKMEHD RQELLALEDL VYKREQTIQA LTFEAQAYRH RMMSYGFSED AEVDDDDVEK NVYDYYDYPP LKCSLNEVVV DDVEKYTLTD
201: SPRGGDNLRI SQSPKRHRHF RKVSTDFSVD SPRSNGEMHD RVYTIDSVHQ GGEEKVMDDG EMNQPGVGDP DIVKLYARMQ ALEADRESMR QAIVSMRTEK
301: AQMVLLKEIA QHLSKEVVLE RRQASIGGVF SFLSVFKWIT SFVFWRKKAR RSKYMNVVQA NNMGLEMLLE KTPRTRQWRC LSSTQV
001: MDLAIVSSPT RDVVRCCDCG CDCSLNGASP GSLLRSVKRK YEEFENEKLF HIPELELDLS SNAKVQIENE LELLRETVSS QQQSIQDLYE ELDEERNAAS
101: TAASEAMSMI LRLQRDKAEL QMELRQFKRF AEEKMEHDQQ ELLDLEDLIY KREQTIQALT FEAQAYKHRM MSFGFTEAEV ETEKNMLSRN PSMIENDYQY
201: DLPTSDYPPI KCNVNENPGP LEADIDVDDV EKYPLADSPH PLKTLERRIS QMERNPSFTQ PTGDVSGGRH YTEKNVVGQS PRHQRHFRRV STGSASSLLG
301: TTREKRLDFS NDSPRSNNGS FRKMEDPPYA AGNSFARDKG DSSEIGDNDM NDRVYTIDSV HHSVSHSGTA EQKFKNDTAD GYAMSPREIS NQPDLGDPEI
401: SKLYMRLQAL EADRESMRQA IMSMRTEKAQ MVLLKEIAQH LSKDVVPERR LPLRKTSIIG AFNFISVFKW ITSFVFWRRK ARRSKYMNGV QGNNMGLQML
501: LEKTPRIRQW RCLSSTQV
101: TAASEAMSMI LRLQRDKAEL QMELRQFKRF AEEKMEHDQQ ELLDLEDLIY KREQTIQALT FEAQAYKHRM MSFGFTEAEV ETEKNMLSRN PSMIENDYQY
201: DLPTSDYPPI KCNVNENPGP LEADIDVDDV EKYPLADSPH PLKTLERRIS QMERNPSFTQ PTGDVSGGRH YTEKNVVGQS PRHQRHFRRV STGSASSLLG
301: TTREKRLDFS NDSPRSNNGS FRKMEDPPYA AGNSFARDKG DSSEIGDNDM NDRVYTIDSV HHSVSHSGTA EQKFKNDTAD GYAMSPREIS NQPDLGDPEI
401: SKLYMRLQAL EADRESMRQA IMSMRTEKAQ MVLLKEIAQH LSKDVVPERR LPLRKTSIIG AFNFISVFKW ITSFVFWRRK ARRSKYMNGV QGNNMGLQML
501: LEKTPRIRQW RCLSSTQV
Arabidopsis Description
MYOB7Myosin-binding protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG14]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.