CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009206.1-P	Field mustard	nucleus	94.12	89.93
CDX70091	Canola	nucleus	94.12	89.93
CDY14078	Canola	nucleus	62.01	65.54
CDY04993	Canola	nucleus	64.22	63.9
AT5G06560.1	Thale cress	nucleus	79.41	62.55
CDY08489	Canola	nucleus	53.68	56.59
CDY01064	Canola	nucleus	59.8	54.71
CDY67532	Canola	nucleus	54.17	53.0
VIT_08s0032g00720.t01	Wine grape	plastid	62.5	49.04
KRH68055	Soybean	cytosol	53.68	46.79
CDY07525	Canola	peroxisome	10.78	45.83
CDX76130	Canola	cytosol	39.71	40.7
CDX78259	Canola	nucleus	39.46	39.66
CDY02887	Canola	cytosol, nucleus, peroxisome	36.76	39.58
CDX67607	Canola	peroxisome	40.69	39.52
CDY70407	Canola	peroxisome	35.54	39.3
CDX73453	Canola	nucleus	39.46	38.89
KRG96316	Soybean	cytosol	49.51	34.83
CDY07526	Canola	nucleus	22.79	32.29
CDX88641	Canola	nucleus	6.37	21.31
CDX68698	Canola	cytosol	14.71	20.41
CDY28219	Canola	cytosol	14.71	20.41
CDY47332	Canola	extracellular, plasma membrane	12.75	19.92
CDY01114	Canola	extracellular, plasma membrane	12.5	19.54
CDY34794	Canola	nucleus	15.44	19.33
CDX76832	Canola	nucleus	15.2	19.25
CDY50792	Canola	nucleus	16.91	18.75
CDY02772	Canola	nucleus	16.67	18.58
CDY51277	Canola	nucleus	16.67	18.48
CDY32744	Canola	nucleus	16.42	18.31
CDY09477	Canola	nucleus	7.84	17.2
CDX72271	Canola	nucleus	16.18	17.1
CDX88643	Canola	nucleus	9.8	16.81
CDY13389	Canola	nucleus	16.18	16.42
CDY11846	Canola	nucleus	9.31	15.97
CDX89779	Canola	endoplasmic reticulum, extracellular	16.67	13.05
CDX85859	Canola	extracellular, plasma membrane, vacuole	15.44	12.78
CDY26705	Canola	endoplasmic reticulum, plasma membrane, plastid	16.18	12.74
CDY18267	Canola	endoplasmic reticulum, plasma membrane	16.18	12.67
CDY19266	Canola	endoplasmic reticulum, nucleus, plasma membrane	16.18	12.67
CDX68162	Canola	extracellular, plasma membrane, vacuole	15.2	12.58
CDY16985	Canola	endoplasmic reticulum, golgi	20.83	12.52
CDX69426	Canola	endoplasmic reticulum, golgi, plastid	20.83	12.43
CDY21687	Canola	endoplasmic reticulum, vacuole	15.44	12.33
CDY01147	Canola	extracellular, golgi, vacuole	16.67	12.3
CDX81908	Canola	endoplasmic reticulum, vacuole	14.95	12.22
CDY68842	Canola	vacuole	16.67	12.08
CDY45396	Canola	extracellular, golgi, vacuole	15.69	11.81
CDX73116	Canola	extracellular, golgi, vacuole	15.69	11.62
CDX96274	Canola	mitochondrion	19.61	10.87
CDY11550	Canola	mitochondrion	19.61	10.03
CDY31127	Canola	cytosol	14.71	9.23
CDY32134	Canola	endoplasmic reticulum, plasma membrane, vacuole	16.18	7.55
CDY10753	Canola	endoplasmic reticulum, plasma membrane	12.99	7.45
CDY29652	Canola	endoplasmic reticulum	13.24	7.41
CDY47125	Canola	endoplasmic reticulum, plasma membrane	12.99	7.35
CDX95032	Canola	endoplasmic reticulum, vacuole	16.42	7.0
CDX93536	Canola	extracellular, vacuole	16.18	6.85
CDY67896	Canola	endoplasmic reticulum, vacuole	12.75	6.82
CDY31126	Canola	endoplasmic reticulum, mitochondrion, plastid, vacuole	0.98	2.02

Protein Annotations

EnsemblPlants:CDX98935	EnsemblPlantsGene:GSBRNA2T00107047001	GO:A0A078E9Z7	InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil
PANTHER:PTHR31422	PANTHER:PTHR31422:SF0	PFAM:PF04576	PFscan:PS51775	ProteinID:CDX98935	ProteinID:CDX98935.1
TMHMM:TMhelix	UniParc:UPI0004EE2943	MapMan:35.1	:	:	:

Description

BnaC09g49000D

Coordinates

chrLK031907:-:693246..695466

Molecular Weight (calculated)

47002.5 Da

IEP (calculated)

5.041

GRAVY (calculated)

-0.760

Length

408 amino acids

Sequence
(BLAST)

001: MDLVRCCDCG CDCSLNASWI RSVKRKHEEL ENYIPELDLD SSSSNAKVQI ENECELLRET VTSQQESIQE LYAELDEERN AASTAANEAM SMILKLQRDK
101: AEIQMELRQF KRFAEEKMEH DQQELLALED LVYKREQTVQ ALVCEAQGYK HRMMSYGVDD LNENPDLEAD VEDVEKYALT DSSPHGREDL KSLEQRISQM
201: ESFTPPHGDV SGGGRTYLEK EVVGQSPRRQ RHLRGGDLSE TGDNEMDDRV YTIDSIHHSV SQSDVSEQKF KDDGYGDKLN QPDDHSDPGI TKLYARLQAL
301: EADRESMRQA IVSMRTEKAQ MVLLKEIAQH LSKDIIPERR LPLQKASTVG AFSFISLFKW ITSFLFWRKR ARRSKYMNGM QGSTMGLQML LEKTPRIRQW
401: RCLSRTQV

Best Arabidopsis Sequence Match ( AT5G06560.1 )
(BLAST)

001: MDLAIVSSPT RDVVRCCDCG CDCSLNGASP GSLLRSVKRK YEEFENEKLF HIPELELDLS SNAKVQIENE LELLRETVSS QQQSIQDLYE ELDEERNAAS
101: TAASEAMSMI LRLQRDKAEL QMELRQFKRF AEEKMEHDQQ ELLDLEDLIY KREQTIQALT FEAQAYKHRM MSFGFTEAEV ETEKNMLSRN PSMIENDYQY
201: DLPTSDYPPI KCNVNENPGP LEADIDVDDV EKYPLADSPH PLKTLERRIS QMERNPSFTQ PTGDVSGGRH YTEKNVVGQS PRHQRHFRRV STGSASSLLG
301: TTREKRLDFS NDSPRSNNGS FRKMEDPPYA AGNSFARDKG DSSEIGDNDM NDRVYTIDSV HHSVSHSGTA EQKFKNDTAD GYAMSPREIS NQPDLGDPEI
401: SKLYMRLQAL EADRESMRQA IMSMRTEKAQ MVLLKEIAQH LSKDVVPERR LPLRKTSIIG AFNFISVFKW ITSFVFWRRK ARRSKYMNGV QGNNMGLQML
501: LEKTPRIRQW RCLSSTQV

Arabidopsis Description

MYOB7Myosin-binding protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG14]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.