Factsheet for Bra009206.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70091	Canola	nucleus	98.83	98.83
CDX98935	Canola	nucleus	89.93	94.12
Bra028728.1-P	Field mustard	nucleus	64.4	67.57
AT5G06560.1	Thale cress	nucleus	76.81	63.32
Bra034805.1-P	Field mustard	nucleus	58.78	56.15
VIT_08s0032g00720.t01	Wine grape	plastid	62.76	51.54
Bra038684.1-P	Field mustard	nucleus	48.24	51.12
KRH68055	Soybean	cytosol	53.16	48.5
GSMUA_Achr1P14210_001	Banana	cytosol	36.07	43.14
Bra014792.1-P	Field mustard	cytosol	40.05	42.96
GSMUA_Achr8P26680_001	Banana	cytosol	29.74	41.91
GSMUA_Achr2P12800_001	Banana	cytosol, nucleus, plasma membrane	43.56	41.33
Bra007093.1-P	Field mustard	nucleus	39.11	41.13
GSMUA_Achr3P15020_001	Banana	nucleus	43.33	41.02
GSMUA_Achr8P04680_001	Banana	cytosol, mitochondrion	35.83	40.8
GSMUA_Achr4P22730_001	Banana	nucleus, plastid	42.15	37.74
KRG96316	Soybean	cytosol	49.18	36.21
Zm00001d033504_P001	Maize	nucleus	37.7	32.39
OQU91257	Sorghum	nucleus	37.7	31.51
TraesCS4A01G159000.1	Wheat	cytosol	32.32	31.44
Zm00001d013658_P001	Maize	nucleus	36.53	31.26
TraesCS1A01G147200.1	Wheat	plastid	34.89	31.11
TraesCS1B01G165300.1	Wheat	plastid	34.89	31.11
TraesCS1D01G145300.1	Wheat	cytosol	27.63	31.05
Os03t0650800-00	Rice	nucleus	35.36	30.2
Zm00001d023648_P003	Maize	plastid	33.26	29.96
TraesCS5D01G380300.1	Wheat	cytosol	27.4	29.4
TraesCS5B01G373100.1	Wheat	nucleus	34.19	29.2
KXG28744	Sorghum	cytosol	30.91	29.14
Os12t0488700-00	Rice	cytosol	34.43	28.99
OQU79118	Sorghum	plastid	16.39	28.81
Bra034886.1-P	Field mustard	cytosol	8.43	28.12
Zm00001d007503_P001	Maize	nucleus	29.98	28.07
HORVU0Hr1G000300.2	Barley	cytosol	28.81	28.02
HORVU4Hr1G041430.2	Barley	cytosol	27.17	27.42
TraesCS5A01G370700.1	Wheat	nucleus	20.61	26.43
HORVU5Hr1G092270.4	Barley	cytosol, plastid	22.01	22.71
Bra006798.1-P	Field mustard	nucleus	15.22	21.24
Bra020409.1-P	Field mustard	nucleus	14.99	20.13
Bra002693.1-P	Field mustard	nucleus	17.1	19.84
Bra002694.1-P	Field mustard	nucleus	16.86	19.57
Bra032692.1-P	Field mustard	extracellular, plasma membrane	11.94	19.54
Bra039233.1-P	Field mustard	nucleus	14.52	19.02
Bra011226.1-P	Field mustard	cytosol	13.58	17.63
Bra006800.1-P	Field mustard	cytosol	6.56	17.28
Bra015360.1-P	Field mustard	endoplasmic reticulum, extracellular	16.86	13.79
Bra025705.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	15.69	12.93
Bra003783.1-P	Field mustard	extracellular, plasma membrane	14.29	12.87
Bra032725.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	16.63	12.86
Bra031059.1-P	Field mustard	endoplasmic reticulum, vacuole	14.99	12.52
Bra015891.1-P	Field mustard	endoplasmic reticulum, golgi	15.93	12.52
Bra008601.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	20.14	12.46
Bra016190.1-P	Field mustard	mitochondrion	18.97	9.3
Bra018297.1-P	Field mustard	endoplasmic reticulum, extracellular	12.65	7.88
Bra021657.1-P	Field mustard	endoplasmic reticulum	12.65	7.28
Bra018599.1-P	Field mustard	extracellular, vacuole	15.93	7.1
Bra030742.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid, vacuole	15.93	5.9

Protein Annotations

EnsemblPlants:Bra009206.1	EnsemblPlants:Bra009206.1-P	EnsemblPlantsGene:Bra009206	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil	PANTHER:PTHR31422	PANTHER:PTHR31422:SF0	PFAM:PF04576
PFscan:PS51775	TMHMM:TMhelix	UniParc:UPI00025451BC	UniProt:M4CYA9	MapMan:35.1	:

Description

AT3G54740 (E=4e-091) | unknown protein

Coordinates

chrA10:-:15636890..15638382

Molecular Weight (calculated)

49049.5 Da

IEP (calculated)

4.626

GRAVY (calculated)

-0.796

Length

427 amino acids

Sequence
(BLAST)

001: MDLVRCCDCG CDCSLNASWI RSVKRKHDEL ESYKPELDLD SSSSNAKVQI ENECELLRET VTSQQESIQE LYAELDEERN AASTAANEAM SMILKLQRDK
101: AEIQMELRQF KRFAEEKMEH DQQELLALED LVYKREQTIQ ALACEAQGYK HRMMSYGVDE SEFDGERNEF EYELPGYDYP PLKCSLNENP DLEADVEDVE
201: KYALTDSSPH GREDLKSLEQ RISQMESGDV SGGGRTYLEK EVVGQSPSSS RDQGPDLSET GDNEMDDRVY TIDSIHHSVS QSDVSEQKFK DDGYGEKLNQ
301: PDDHSDPGIT KLYARLQALE ADRESMRQAI VSMRTEKAQM VLLKEIAQHL SKDMVPERRL PLQKASAVGA FSFISLFKWI TSFLFWRKRA RRSKYMNGMQ
401: GSKMGLQMLL ETTPRIRQWR CLSRTQV

Best Arabidopsis Sequence Match ( AT5G06560.1 )
(BLAST)

001: MDLAIVSSPT RDVVRCCDCG CDCSLNGASP GSLLRSVKRK YEEFENEKLF HIPELELDLS SNAKVQIENE LELLRETVSS QQQSIQDLYE ELDEERNAAS
101: TAASEAMSMI LRLQRDKAEL QMELRQFKRF AEEKMEHDQQ ELLDLEDLIY KREQTIQALT FEAQAYKHRM MSFGFTEAEV ETEKNMLSRN PSMIENDYQY
201: DLPTSDYPPI KCNVNENPGP LEADIDVDDV EKYPLADSPH PLKTLERRIS QMERNPSFTQ PTGDVSGGRH YTEKNVVGQS PRHQRHFRRV STGSASSLLG
301: TTREKRLDFS NDSPRSNNGS FRKMEDPPYA AGNSFARDKG DSSEIGDNDM NDRVYTIDSV HHSVSHSGTA EQKFKNDTAD GYAMSPREIS NQPDLGDPEI
401: SKLYMRLQAL EADRESMRQA IMSMRTEKAQ MVLLKEIAQH LSKDVVPERR LPLRKTSIIG AFNFISVFKW ITSFVFWRRK ARRSKYMNGV QGNNMGLQML
501: LEKTPRIRQW RCLSSTQV

Arabidopsis Description

MYOB7Myosin-binding protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG14]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.