Factsheet for GSMUA_Achr3P15020_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P26680_001	Banana	cytosol	52.77	78.55
GSMUA_Achr1P14210_001	Banana	cytosol	56.76	71.71
GSMUA_Achr8P04680_001	Banana	cytosol, mitochondrion	59.42	71.47
GSMUA_Achr2P12800_001	Banana	cytosol, nucleus, plasma membrane	43.9	44.0
Bra009206.1-P	Field mustard	nucleus	41.02	43.33
PGSC0003DMT400022326	Potato	nucleus	46.12	41.94
KRH68055	Soybean	cytosol	43.24	41.67
VIT_08s0032g00720.t01	Wine grape	plastid	47.23	40.96
Solyc11g045480.1.1	Tomato	mitochondrion	18.4	40.89
Bra028728.1-P	Field mustard	nucleus	36.59	40.54
KRH71751	Soybean	nucleus	43.9	40.41
KRH32933	Soybean	nucleus	43.24	39.8
CDY07525	Canola	peroxisome	8.43	39.58
PGSC0003DMT400072288	Potato	plastid	44.35	38.76
AT5G06560.1	Thale cress	nucleus	43.46	37.84
Bra034805.1-P	Field mustard	nucleus	37.25	37.58
GSMUA_Achr4P22730_001	Banana	nucleus, plastid	39.69	37.53
TraesCS4A01G159000.1	Wheat	cytosol	34.81	35.76
Bra038684.1-P	Field mustard	nucleus	31.49	35.24
KXG28744	Sorghum	cytosol	34.37	34.22
AT3G11850.2	Thale cress	nucleus	37.92	33.93
Zm00001d023648_P003	Maize	plastid	35.26	33.54
Zm00001d033504_P001	Maize	nucleus	36.81	33.4
OQU91257	Sorghum	nucleus	37.69	33.27
Zm00001d007503_P001	Maize	nucleus	33.48	33.11
CDY07526	Canola	nucleus	21.06	32.99
Zm00001d013658_P001	Maize	nucleus	35.92	32.46
TraesCS5B01G373100.1	Wheat	nucleus	35.92	32.4
TraesCS1D01G145300.1	Wheat	cytosol	27.27	32.37
TraesCS1B01G165300.1	Wheat	plastid	34.37	32.36
TraesCS1A01G147200.1	Wheat	plastid	34.15	32.15
TraesCS5D01G380300.1	Wheat	cytosol	28.16	31.91
Os03t0650800-00	Rice	nucleus	35.26	31.8
HORVU4Hr1G041430.2	Barley	cytosol	29.71	31.68
KRG96316	Soybean	cytosol	40.58	31.55
Os12t0488700-00	Rice	cytosol	35.26	31.36
OQU79118	Sorghum	plastid	15.74	29.22
HORVU0Hr1G000300.2	Barley	cytosol	26.83	27.56
TraesCS5A01G370700.1	Wheat	nucleus	20.18	27.33
HORVU5Hr1G092270.4	Barley	cytosol, plastid	22.84	24.88
GSMUA_Achr6P06580_001	Banana	nucleus	11.75	17.73
GSMUA_Achr10P...	Banana	nucleus	16.19	15.15
GSMUA_Achr3P17210_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	17.96	13.26
GSMUA_Achr1P05380_001	Banana	golgi, plasma membrane	16.41	12.61
GSMUA_AchrUn_...	Banana	golgi, vacuole	16.41	11.6
GSMUA_Achr4P17820_001	Banana	golgi	17.29	10.58
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	16.85	9.61
GSMUA_Achr7P01610_001	Banana	golgi, mitochondrion	16.19	9.17
GSMUA_Achr6P17030_001	Banana	endoplasmic reticulum, golgi	18.4	9.08
GSMUA_Achr6P07650_001	Banana	golgi, plasma membrane	17.74	8.51

Protein Annotations

EnsemblPlants:GSMUA_Achr3P15020_001	EnsemblPlants:GSMUA_Achr3T15020_001	EnsemblPlantsGene:GSMUA_Achr3G15020_001	InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil
PANTHER:PTHR31422	PANTHER:PTHR31422:SF0	PFAM:PF04576	PFscan:PS51775	SEG:seg	UniParc:UPI000296D26E
UniProt:M0SER8	MapMan:35.1	:	:	:	:

Description

Putative DUF593 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G15020_001]

Coordinates

chr3:+:15534637..15536440

Molecular Weight (calculated)

50113.5 Da

IEP (calculated)

7.913

GRAVY (calculated)

-0.557

Length

451 amino acids

Sequence
(BLAST)

001: MPDGSGGGTD TVARTCASGC HCFSPSFVPS VAWNRSLKRK LDERDAEACS LSCVAKRGDE GEGEGGAGAS FARVDIGNEA AALREVLISH QQSVQKLLTE
101: LEEERSAAAS AATEAMSMIL RLQREKAEAQ MEARQFKRLA DEKMTHDQQE IASLEDLLFK REQAVQALSC EVQAYRHRLL SYGIGIDGDA PPSEPQTPDT
201: ATAASSVSQF DVLPRDYPPL RCNGDAAADL DKYPSGESPR ERLQRLEKRR IFQLERMPSS SFSHVMDKDV EFKKGDKFPA AMDCASDYGG RDDMSDRVYT
301: VDAVHGASDD YVSTPRELQN RRFVGGGGRV AQEAEIRKLC ARLEALEADR ESMRQSFISM GTDKAQMVLL KEIAQQMCKE VAPERKLIKK PPSNKRFSIV
401: SIIRSVISFV LWRRKSTRAR HTFGLPSSDA GLLLLLDKSP RMRHRRFLTR T

Best Arabidopsis Sequence Match ( AT5G06560.1 )
(BLAST)

001: MDLAIVSSPT RDVVRCCDCG CDCSLNGASP GSLLRSVKRK YEEFENEKLF HIPELELDLS SNAKVQIENE LELLRETVSS QQQSIQDLYE ELDEERNAAS
101: TAASEAMSMI LRLQRDKAEL QMELRQFKRF AEEKMEHDQQ ELLDLEDLIY KREQTIQALT FEAQAYKHRM MSFGFTEAEV ETEKNMLSRN PSMIENDYQY
201: DLPTSDYPPI KCNVNENPGP LEADIDVDDV EKYPLADSPH PLKTLERRIS QMERNPSFTQ PTGDVSGGRH YTEKNVVGQS PRHQRHFRRV STGSASSLLG
301: TTREKRLDFS NDSPRSNNGS FRKMEDPPYA AGNSFARDKG DSSEIGDNDM NDRVYTIDSV HHSVSHSGTA EQKFKNDTAD GYAMSPREIS NQPDLGDPEI
401: SKLYMRLQAL EADRESMRQA IMSMRTEKAQ MVLLKEIAQH LSKDVVPERR LPLRKTSIIG AFNFISVFKW ITSFVFWRRK ARRSKYMNGV QGNNMGLQML
501: LEKTPRIRQW RCLSSTQV

Arabidopsis Description

MYOB7Myosin-binding protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG14]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.