Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- cytosol 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G147200.1 | Wheat | plastid | 67.46 | 71.4 |
| TraesCS1B01G165300.1 | Wheat | plastid | 67.26 | 71.19 |
| Zm00001d023648_P003 | Maize | plastid | 65.48 | 70.04 |
| TraesCS1D01G145300.1 | Wheat | cytosol | 52.27 | 69.74 |
| OQU79118 | Sorghum | plastid | 33.14 | 69.14 |
| HORVU0Hr1G000300.2 | Barley | cytosol | 55.03 | 63.55 |
| GSMUA_Achr8P26680_001 | Banana | cytosol | 23.87 | 39.93 |
| GSMUA_Achr1P14210_001 | Banana | cytosol | 27.61 | 39.22 |
| GSMUA_Achr8P04680_001 | Banana | cytosol, mitochondrion | 27.81 | 37.6 |
| Bra028728.1-P | Field mustard | nucleus | 28.99 | 36.12 |
| GSMUA_Achr3P15020_001 | Banana | nucleus | 31.36 | 35.26 |
| Solyc11g045480.1.1 | Tomato | mitochondrion | 13.81 | 34.48 |
| Bra009206.1-P | Field mustard | nucleus | 28.99 | 34.43 |
| KRH68055 | Soybean | cytosol | 31.56 | 34.19 |
| CDY07525 | Canola | peroxisome | 6.31 | 33.33 |
| KRH32933 | Soybean | nucleus | 32.15 | 33.27 |
| VIT_08s0032g00720.t01 | Wine grape | plastid | 33.53 | 32.69 |
| KRH71751 | Soybean | nucleus | 31.36 | 32.45 |
| PGSC0003DMT400022326 | Potato | nucleus | 30.77 | 31.45 |
| AT5G06560.1 | Thale cress | nucleus | 31.95 | 31.27 |
| PGSC0003DMT400072288 | Potato | plastid | 31.76 | 31.2 |
| Os03t0650800-00 | Rice | nucleus | 29.59 | 30.0 |
| Bra034805.1-P | Field mustard | nucleus | 26.43 | 29.98 |
| AT3G11850.2 | Thale cress | nucleus | 27.42 | 27.58 |
| Bra038684.1-P | Field mustard | nucleus | 21.3 | 26.8 |
| KRG96316 | Soybean | cytosol | 29.19 | 25.52 |
| CDY07526 | Canola | nucleus | 13.81 | 24.31 |
| Os08t0269000-01 | Rice | cytosol, golgi, nucleus | 12.62 | 22.07 |
| Os03t0708700-00 | Rice | cytosol, nucleus | 14.2 | 16.48 |
| Os08t0442350-01 | Rice | nucleus | 13.02 | 13.25 |
| Os10t0414800-01 | Rice | mitochondrion, nucleus, plastid, vacuole | 12.62 | 10.7 |
| Os03t0259900-01 | Rice | mitochondrion | 15.98 | 9.0 |
| Os03t0799200-01 | Rice | golgi, vacuole | 12.62 | 8.8 |
| Os03t0164800-00 | Rice | golgi, mitochondrion | 12.62 | 8.79 |
Protein Annotations
| EnsemblPlants:Os12t0488700-00 | EnsemblPlantsGene:Os12g0488700 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:GTD-bd |
| InterPro:IPR007656 | ncoils:Coil | PANTHER:PTHR31422 | PANTHER:PTHR31422:SF0 | PFAM:PF04576 | PFscan:PS51775 |
| ProteinID:BAT17185.1 | SEG:seg | UniParc:UPI0000DD9EBA | UniProt:A0A0P0YAC9 | MapMan:35.1 | : |
Description
Protein of unknown function DUF593 domain containing protein. (Os12t0488700-00)
Coordinates
chr12:+:18308147..18310492
Molecular Weight (calculated)
53489.7 Da
IEP (calculated)
8.606
GRAVY (calculated)
-0.381
Length
507 amino acids
Sequence
(BLAST)
(BLAST)
001: MRTCHHLPPS TATATASAAA MADSGEPPPP LCPLCGHPAA SYTSSSSSSP SPSQPTARPP LKRKAPPEAP PAVVRVEIGD EAAALREALA RQHGALADLQ
101: AELDAERGAA AGAASEAMTM ILRLQREKAE AMMEARQFRR YAEEKMSHDA AELAALEDLL AKRDAALRAL QSSSSSRGGG GGRGVGGGSG RATPSFPGSS
201: PHHYPSTPTP ASAAAAANYP PLRCFIDHPP TASEADALDA QTPREHLTRL AHRVHMLERG VHPMATTTTT TPIIRVAPGS AFPRPTRAYS DADSLEFCDG
301: EYFPDDVDCG ASDRVYTVDA IHGRPLAVPE GSCTPGGSSC CGGGGVPWAE DEEMRRLSAR LQALEADRET MRQAIVSMGA EKAQVVLLKE IAQQLCKEAT
401: PPLPPSAVTV GHHLYKGAAA PPAVTVKMRP PRPPVVMHRR VIDAPPAAKT SYIGAVAKWF TSIVSRYKKT PRTKYPIGQC GNNVGLLLLL DKAPRPGHGH
501: QKMPKKI
101: AELDAERGAA AGAASEAMTM ILRLQREKAE AMMEARQFRR YAEEKMSHDA AELAALEDLL AKRDAALRAL QSSSSSRGGG GGRGVGGGSG RATPSFPGSS
201: PHHYPSTPTP ASAAAAANYP PLRCFIDHPP TASEADALDA QTPREHLTRL AHRVHMLERG VHPMATTTTT TPIIRVAPGS AFPRPTRAYS DADSLEFCDG
301: EYFPDDVDCG ASDRVYTVDA IHGRPLAVPE GSCTPGGSSC CGGGGVPWAE DEEMRRLSAR LQALEADRET MRQAIVSMGA EKAQVVLLKE IAQQLCKEAT
401: PPLPPSAVTV GHHLYKGAAA PPAVTVKMRP PRPPVVMHRR VIDAPPAAKT SYIGAVAKWF TSIVSRYKKT PRTKYPIGQC GNNVGLLLLL DKAPRPGHGH
501: QKMPKKI
001: MDLAIVSSPT RDVVRCCDCG CDCSLNGASP GSLLRSVKRK YEEFENEKLF HIPELELDLS SNAKVQIENE LELLRETVSS QQQSIQDLYE ELDEERNAAS
101: TAASEAMSMI LRLQRDKAEL QMELRQFKRF AEEKMEHDQQ ELLDLEDLIY KREQTIQALT FEAQAYKHRM MSFGFTEAEV ETEKNMLSRN PSMIENDYQY
201: DLPTSDYPPI KCNVNENPGP LEADIDVDDV EKYPLADSPH PLKTLERRIS QMERNPSFTQ PTGDVSGGRH YTEKNVVGQS PRHQRHFRRV STGSASSLLG
301: TTREKRLDFS NDSPRSNNGS FRKMEDPPYA AGNSFARDKG DSSEIGDNDM NDRVYTIDSV HHSVSHSGTA EQKFKNDTAD GYAMSPREIS NQPDLGDPEI
401: SKLYMRLQAL EADRESMRQA IMSMRTEKAQ MVLLKEIAQH LSKDVVPERR LPLRKTSIIG AFNFISVFKW ITSFVFWRRK ARRSKYMNGV QGNNMGLQML
501: LEKTPRIRQW RCLSSTQV
101: TAASEAMSMI LRLQRDKAEL QMELRQFKRF AEEKMEHDQQ ELLDLEDLIY KREQTIQALT FEAQAYKHRM MSFGFTEAEV ETEKNMLSRN PSMIENDYQY
201: DLPTSDYPPI KCNVNENPGP LEADIDVDDV EKYPLADSPH PLKTLERRIS QMERNPSFTQ PTGDVSGGRH YTEKNVVGQS PRHQRHFRRV STGSASSLLG
301: TTREKRLDFS NDSPRSNNGS FRKMEDPPYA AGNSFARDKG DSSEIGDNDM NDRVYTIDSV HHSVSHSGTA EQKFKNDTAD GYAMSPREIS NQPDLGDPEI
401: SKLYMRLQAL EADRESMRQA IMSMRTEKAQ MVLLKEIAQH LSKDVVPERR LPLRKTSIIG AFNFISVFKW ITSFVFWRRK ARRSKYMNGV QGNNMGLQML
501: LEKTPRIRQW RCLSSTQV
Arabidopsis Description
MYOB7Myosin-binding protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG14]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.