Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- plastid 2
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g045480.1.1 | Tomato | mitochondrion | 52.08 | 24.63 |
| CDY70407 | Canola | peroxisome | 93.75 | 24.39 |
| CDX67607 | Canola | peroxisome | 98.96 | 22.62 |
| CDY02887 | Canola | cytosol, nucleus, peroxisome | 79.17 | 20.05 |
| CDX78259 | Canola | nucleus | 84.38 | 19.95 |
| CDX73453 | Canola | nucleus | 85.42 | 19.81 |
| CDX76130 | Canola | cytosol | 81.25 | 19.6 |
| CDY08489 | Canola | nucleus | 57.29 | 14.21 |
| GSMUA_Achr8P26680_001 | Banana | cytosol | 42.71 | 13.53 |
| CDY14078 | Canola | nucleus | 53.12 | 13.21 |
| OQU79118 | Sorghum | plastid | 32.29 | 12.76 |
| CDY67532 | Canola | nucleus | 55.21 | 12.71 |
| CDY04993 | Canola | nucleus | 54.17 | 12.68 |
| CDY01064 | Canola | nucleus | 58.33 | 12.56 |
| GSMUA_Achr1P14210_001 | Banana | cytosol | 40.62 | 10.92 |
| CDX98935 | Canola | nucleus | 45.83 | 10.78 |
| CDX70091 | Canola | nucleus | 47.92 | 10.77 |
| TraesCS5A01G370700.1 | Wheat | nucleus | 35.42 | 10.21 |
| GSMUA_Achr8P04680_001 | Banana | cytosol, mitochondrion | 38.54 | 9.87 |
| TraesCS1D01G145300.1 | Wheat | cytosol | 36.46 | 9.21 |
| TraesCS5D01G380300.1 | Wheat | cytosol | 36.46 | 8.79 |
| HORVU5Hr1G092270.4 | Barley | cytosol, plastid | 36.46 | 8.45 |
| GSMUA_Achr3P15020_001 | Banana | nucleus | 39.58 | 8.43 |
| GSMUA_Achr4P22730_001 | Banana | nucleus, plastid | 40.62 | 8.18 |
| Zm00001d033504_P001 | Maize | nucleus | 40.62 | 7.85 |
| OQU91257 | Sorghum | nucleus | 40.62 | 7.63 |
| Zm00001d013658_P001 | Maize | nucleus | 39.58 | 7.62 |
| Os03t0650800-00 | Rice | nucleus | 39.58 | 7.6 |
| GSMUA_Achr2P12800_001 | Banana | cytosol, nucleus, plasma membrane | 34.38 | 7.33 |
| TraesCS1A01G147200.1 | Wheat | plastid | 36.46 | 7.31 |
| TraesCS1B01G165300.1 | Wheat | plastid | 36.46 | 7.31 |
| TraesCS4A01G159000.1 | Wheat | cytosol | 31.25 | 6.83 |
| TraesCS5B01G373100.1 | Wheat | nucleus | 35.42 | 6.8 |
| Zm00001d007503_P001 | Maize | nucleus | 32.29 | 6.8 |
| KXG28744 | Sorghum | cytosol | 31.25 | 6.62 |
| Zm00001d023648_P003 | Maize | plastid | 31.25 | 6.33 |
| Os12t0488700-00 | Rice | cytosol | 33.33 | 6.31 |
| HORVU4Hr1G041430.2 | Barley | cytosol | 26.04 | 5.91 |
| HORVU0Hr1G000300.2 | Barley | cytosol | 21.88 | 4.78 |
| CDX88643 | Canola | nucleus | 10.42 | 4.2 |
| CDY11846 | Canola | nucleus | 9.38 | 3.78 |
| CDY32744 | Canola | nucleus | 10.42 | 2.73 |
| CDY02772 | Canola | nucleus | 10.42 | 2.73 |
| CDY50792 | Canola | nucleus | 10.42 | 2.72 |
| CDY51277 | Canola | nucleus | 9.38 | 2.45 |
| CDX68698 | Canola | cytosol | 5.21 | 1.7 |
| CDX68162 | Canola | extracellular, plasma membrane, vacuole | 8.33 | 1.62 |
| CDX85859 | Canola | extracellular, plasma membrane, vacuole | 8.33 | 1.62 |
| CDY09477 | Canola | nucleus | 3.12 | 1.61 |
| CDY45396 | Canola | extracellular, golgi, vacuole | 8.33 | 1.48 |
| CDX81908 | Canola | endoplasmic reticulum, vacuole | 7.29 | 1.4 |
| CDY21687 | Canola | endoplasmic reticulum, vacuole | 7.29 | 1.37 |
| CDY26705 | Canola | endoplasmic reticulum, plasma membrane, plastid | 7.29 | 1.35 |
| CDY19266 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 7.29 | 1.34 |
| CDX72271 | Canola | nucleus | 5.21 | 1.3 |
| CDX73116 | Canola | extracellular, golgi, vacuole | 7.29 | 1.27 |
| CDY13389 | Canola | nucleus | 5.21 | 1.24 |
| CDX76832 | Canola | nucleus | 4.17 | 1.24 |
| CDY34794 | Canola | nucleus | 4.17 | 1.23 |
| CDX96274 | Canola | mitochondrion | 9.38 | 1.22 |
| CDY16985 | Canola | endoplasmic reticulum, golgi | 8.33 | 1.18 |
| CDX69426 | Canola | endoplasmic reticulum, golgi, plastid | 8.33 | 1.17 |
| CDY11550 | Canola | mitochondrion | 9.38 | 1.13 |
| CDY28219 | Canola | cytosol | 3.12 | 1.02 |
| CDY31127 | Canola | cytosol | 6.25 | 0.92 |
| CDY01147 | Canola | extracellular, golgi, vacuole | 5.21 | 0.9 |
| CDY68842 | Canola | vacuole | 5.21 | 0.89 |
| CDX89779 | Canola | endoplasmic reticulum, extracellular | 4.17 | 0.77 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 7.29 | 0.73 |
| CDX93536 | Canola | extracellular, vacuole | 7.29 | 0.73 |
| CDY18267 | Canola | endoplasmic reticulum, plasma membrane | 3.12 | 0.58 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 5.21 | 0.57 |
| CDY47332 | Canola | extracellular, plasma membrane | 1.04 | 0.38 |
| CDY01114 | Canola | extracellular, plasma membrane | 1.04 | 0.38 |
| CDY29652 | Canola | endoplasmic reticulum | 0.0 | 0.0 |
| CDX88641 | Canola | nucleus | 0.0 | 0.0 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 0.0 | 0.0 |
| CDY07526 | Canola | nucleus | 0.0 | 0.0 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 0.0 | 0.0 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 0.0 | 0.0 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY07525 | EnsemblPlantsGene:GSBRNA2T00124573001 | PANTHER:PTHR31422 | PANTHER:PTHR31422:SF0 | ProteinID:CDY07525 | ProteinID:CDY07525.1 |
| UniParc:UPI0004EEC1DF | UniProt:A0A078EZN3 | MapMan:35.1 | : | : | : |
Description
BnaC06g15390DBnaC06g15390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078EZN3]
Coordinates
chrLK031979:-:361625..362082
Molecular Weight (calculated)
11191.9 Da
IEP (calculated)
11.503
GRAVY (calculated)
-0.205
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MRTDKAQLVL LKEIAQHLSK ETVTTKRRHL VSKMPSFKAF CVVTVFKWIV SFVSWRRKAK QNKYVYNLSA NNMGMLMILG EGSRTRRWSC LTSSHV
001: MMLLRGSSDS SSSNAKILVE NECAALLEAL SSQRETVKDL HLELEEERNA AASAANETMS MILRLQREKA EIQMEARQFK MFAQEKMTHD QEKLSVLENL
101: LYEKEQAIEA LTYEVEAYKH RLLSYGVSEA EIHDQILGFG RDSSTVGFDV YPCEYTSLEC SVDENPSGPD GNFEIEEKVM VGQSPRWPYY DPNSPLGTAK
201: DIKGASFADS PMSSSSDRVY TIDSIHVGVS EVKIDDEPNK MSKGKLNGDH WNSPRYQEPF TTQQGVNEPD IEKLYTRLQA LEADRESLRQ IIVSMRTDKA
301: QLVLLKEIAQ HLTKETGATS RRNPVSKMPS LKVFSVVTVF KWIVSFVSWK RKARQNKYVY ELSANNMGML MILGEGSGTR RWRCLTSSHV
101: LYEKEQAIEA LTYEVEAYKH RLLSYGVSEA EIHDQILGFG RDSSTVGFDV YPCEYTSLEC SVDENPSGPD GNFEIEEKVM VGQSPRWPYY DPNSPLGTAK
201: DIKGASFADS PMSSSSDRVY TIDSIHVGVS EVKIDDEPNK MSKGKLNGDH WNSPRYQEPF TTQQGVNEPD IEKLYTRLQA LEADRESLRQ IIVSMRTDKA
301: QLVLLKEIAQ HLTKETGATS RRNPVSKMPS LKVFSVVTVF KWIVSFVSWK RKARQNKYVY ELSANNMGML MILGEGSGTR RWRCLTSSHV
Arabidopsis Description
Uncharacterized protein T5N23_100 [Source:UniProtKB/TrEMBL;Acc:Q9M1S6]
SUBAcon: [peroxisome,plastid,nucleus]
SUBAcon: [peroxisome,plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.